RNA–Protein interactions for RNA: ENST00000312413.10

CLCN6-201, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 2 BASIC

Gene CLCN6, Length 5,631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-201ENST00000312413 LURAP1Q96LR2 239 aa12.81□□□□□ -0.36
CLCN6-201ENST00000312413 OR5B2Q96R09 309 aa12.81□□□□□ -0.36
CLCN6-201ENST00000312413 HAPLN2Q9GZV7 340 aa12.81□□□□□ -0.36
CLCN6-201ENST00000312413 EMC7Q9NPA0 242 aa12.81□□□□□ -0.36
CLCN6-201ENST00000312413 KLHL42Q9P2K6 505 aa12.81□□□□□ -0.36
CLCN6-201ENST00000312413 POLHQ9Y253 713 aa12.81□□□□□ -0.36
CLCN6-201ENST00000312413 METTL15A6NJ78 407 aa12.8□□□□□ -0.36
CLCN6-201ENST00000312413 GABARAPO95166 117 aa12.8□□□□□ -0.36
CLCN6-201ENST00000312413 HBE1P02100 147 aa12.8□□□□□ -0.36
CLCN6-201ENST00000312413 TCRBP04435 133 aa12.8□□□□□ -0.36
CLCN6-201ENST00000312413 WNT7BP56706 349 aa12.8□□□□□ -0.36
CLCN6-201ENST00000312413 COL9A2Q14055 689 aaPredicted RBP12.8□□□□□ -0.36
CLCN6-201ENST00000312413 SLC5A12Q1EHB4 618 aa12.8□□□□□ -0.36
CLCN6-201ENST00000312413 ZNF542PQ5EBM4 170 aa12.8□□□□□ -0.36
CLCN6-201ENST00000312413 USP53Q70EK8 1073 aa12.8□□□□□ -0.36
CLCN6-201ENST00000312413 SLC51BQ86UW2 128 aa12.8□□□□□ -0.36
CLCN6-201ENST00000312413 HCAR1Q9BXC0 346 aa12.8□□□□□ -0.36
CLCN6-201ENST00000312413 ELOVL3Q9HB03 270 aa12.8□□□□□ -0.36
CLCN6-201ENST00000312413 BOLA1Q9Y3E2 137 aa12.8□□□□□ -0.36
CLCN6-201ENST00000312413 COL14A1Q05707 1796 aaKnown RBP12.8□□□□□ -0.36
CLCN6-201ENST00000312413 I6L893 689 aaPredicted RBP12.8□□□□□ -0.36
CLCN6-201ENST00000312413 CPNE6O95741 557 aa12.8□□□□□ -0.36
CLCN6-201ENST00000312413 DBHP09172 617 aa12.8□□□□□ -0.36
CLCN6-201ENST00000312413 SLC1A3P43003 542 aa12.8□□□□□ -0.36
CLCN6-201ENST00000312413 ZNF140P52738 457 aaPredicted RBP12.8□□□□□ -0.36
CLCN6-201ENST00000312413 MAMDC4Q6UXC1 1216 aa12.8□□□□□ -0.36
CLCN6-201ENST00000312413 TECPR1Q7Z6L1 1165 aa12.8□□□□□ -0.36
CLCN6-201ENST00000312413 TMEM200AQ86VY9 491 aa12.8□□□□□ -0.36
CLCN6-201ENST00000312413 GPR26Q8NDV2 337 aa12.8□□□□□ -0.36
CLCN6-201ENST00000312413 CPPED1Q9BRF8 314 aaPredicted RBP12.8□□□□□ -0.36
CLCN6-201ENST00000312413 GPR174Q9BXC1 333 aa12.8□□□□□ -0.36
CLCN6-201ENST00000312413 C11orf54Q9H0W9 315 aaPredicted RBP12.8□□□□□ -0.36
CLCN6-201ENST00000312413 AFDNP55196 1824 aaKnown RBP12.8□□□□□ -0.36
CLCN6-201ENST00000312413 IGKV6-21A0A0C4DH24 114 aa12.8□□□□□ -0.36
CLCN6-201ENST00000312413 HTR4Q13639 388 aa12.8□□□□□ -0.36
CLCN6-201ENST00000312413 SSX9Q7RTT3 188 aa12.8□□□□□ -0.36
CLCN6-201ENST00000312413 ZNF443Q9Y2A4 671 aaPredicted RBP12.8□□□□□ -0.36
CLCN6-201ENST00000312413 ENTPD2Q9Y5L3 495 aa12.8□□□□□ -0.36
CLCN6-201ENST00000312413 ACTL7AQ9Y615 435 aa12.8□□□□□ -0.36
CLCN6-201ENST00000312413 FMN2Q9NZ56 1722 aa12.8□□□□□ -0.36
CLCN6-201ENST00000312413 CEBPZOSA8MTT3 80 aa12.8□□□□□ -0.36
CLCN6-201ENST00000312413 C17orf105B2RV13 164 aa12.8□□□□□ -0.36
CLCN6-201ENST00000312413 PFKMP08237 780 aa12.8□□□□□ -0.36
CLCN6-201ENST00000312413 SERPINA2P20848 420 aa12.8□□□□□ -0.36
CLCN6-201ENST00000312413 S100A11P31949 105 aa12.8□□□□□ -0.36
CLCN6-201ENST00000312413 TPMTP51580 245 aa12.8□□□□□ -0.36
CLCN6-201ENST00000312413 GPLD1P80108 840 aa12.8□□□□□ -0.36
CLCN6-201ENST00000312413 MSMO1Q15800 293 aa12.8□□□□□ -0.36
CLCN6-201ENST00000312413 SOHLH1Q5JUK2 328 aa12.8□□□□□ -0.36
CLCN6-201ENST00000312413 HENMT1Q5T8I9 393 aaKnown RBP12.8□□□□□ -0.36
CLCN6-201ENST00000312413 OR7E24Q6IFN5 339 aa12.8□□□□□ -0.36
CLCN6-201ENST00000312413 RETREG3Q86VR2 466 aa12.8□□□□□ -0.36
CLCN6-201ENST00000312413 VRK2Q86Y07 508 aa12.8□□□□□ -0.36
CLCN6-201ENST00000312413 RDH10Q8IZV5 341 aa12.8□□□□□ -0.36
CLCN6-201ENST00000312413 MSI2Q96DH6 328 aaKnown RBP12.8□□□□□ -0.36
CLCN6-201ENST00000312413 DAZAP1Q96EP5 407 aaKnown RBP12.8□□□□□ -0.36
CLCN6-201ENST00000312413 SEC22AQ96IW7 307 aa12.8□□□□□ -0.36
CLCN6-201ENST00000312413 MYOM1P52179 1685 aa12.8□□□□□ -0.36
CLCN6-201ENST00000312413 YY2O15391 372 aa12.8□□□□□ -0.36
CLCN6-201ENST00000312413 GASTP01350 101 aa12.8□□□□□ -0.36
CLCN6-201ENST00000312413 ZNF26P17031 533 aaPredicted RBP12.8□□□□□ -0.36
CLCN6-201ENST00000312413 MTNR1BP49286 362 aa12.8□□□□□ -0.36
CLCN6-201ENST00000312413 OR1Q1Q15612 314 aa12.8□□□□□ -0.36
CLCN6-201ENST00000312413 OR7A5Q15622 319 aa12.8□□□□□ -0.36
CLCN6-201ENST00000312413 SYPL1Q16563 259 aa12.8□□□□□ -0.36
CLCN6-201ENST00000312413 AARDQ4LEZ3 155 aa12.8□□□□□ -0.36
CLCN6-201ENST00000312413 FBXW12Q6X9E4 464 aa12.8□□□□□ -0.36
CLCN6-201ENST00000312413 IL1F10Q8WWZ1 152 aa12.8□□□□□ -0.36
CLCN6-201ENST00000312413 LINC01599Q8WXQ3 324 aa12.8□□□□□ -0.36
CLCN6-201ENST00000312413 BTF3L4Q96K17 158 aa12.8□□□□□ -0.36
CLCN6-201ENST00000312413 OR7D2Q96RA2 312 aa12.8□□□□□ -0.36
CLCN6-201ENST00000312413 CUTCQ9NTM9 273 aa12.8□□□□□ -0.36
CLCN6-201ENST00000312413 AGAP14A8MT82 685 aa12.79□□□□□ -0.36
CLCN6-201ENST00000312413 CLN5O75503 358 aa12.79□□□□□ -0.36
CLCN6-201ENST00000312413 SCAF4O95104 1147 aaKnown RBP12.79□□□□□ -0.36
CLCN6-201ENST00000312413 KITLGP21583 273 aa12.79□□□□□ -0.36
CLCN6-201ENST00000312413 HBA1P69905 142 aa12.79□□□□□ -0.36
CLCN6-201ENST00000312413 PLGLAQ15195 96 aa12.79□□□□□ -0.36
CLCN6-201ENST00000312413 VASNQ6EMK4 673 aa12.79□□□□□ -0.36
CLCN6-201ENST00000312413 ARFGAP1Q8N6T3 406 aa12.79□□□□□ -0.36
CLCN6-201ENST00000312413 PLPP5Q8NEB5 264 aa12.79□□□□□ -0.36
CLCN6-201ENST00000312413 UPRTQ96BW1 309 aa12.79□□□□□ -0.36
CLCN6-201ENST00000312413 RADILQ96JH8 1075 aa12.79□□□□□ -0.36
CLCN6-201ENST00000312413 C20orf27Q9GZN8 174 aa12.79□□□□□ -0.36
CLCN6-201ENST00000312413 DZANK1Q9NVP4 752 aa12.79□□□□□ -0.36
CLCN6-201ENST00000312413 ANKRD30BLA7E2S9 258 aa12.79□□□□□ -0.36
CLCN6-201ENST00000312413 TK1P04183 234 aa12.79□□□□□ -0.36
CLCN6-201ENST00000312413 CNR1P21554 472 aa12.79□□□□□ -0.36
CLCN6-201ENST00000312413 ACSM1Q08AH1 577 aa12.79□□□□□ -0.36
CLCN6-201ENST00000312413 DBPQ10586 325 aaPredicted RBP12.79□□□□□ -0.36
CLCN6-201ENST00000312413 PDLIM3Q53GG5 364 aaPredicted RBP12.79□□□□□ -0.36
CLCN6-201ENST00000312413 NHSL2Q5HYW2 709 aa12.79□□□□□ -0.36
CLCN6-201ENST00000312413 SFXN4Q6P4A7 337 aa12.79□□□□□ -0.36
CLCN6-201ENST00000312413 LYSMD2Q8IV50 215 aa12.79□□□□□ -0.36
CLCN6-201ENST00000312413 ZNF439Q8NDP4 499 aa12.79□□□□□ -0.36
CLCN6-201ENST00000312413 RSPRY1Q96DX4 576 aa12.79□□□□□ -0.36
CLCN6-201ENST00000312413 VDAC3Q9Y277 283 aa12.79□□□□□ -0.36
CLCN6-201ENST00000312413 MYO10Q9HD67 2058 aa12.79□□□□□ -0.36
CLCN6-201ENST00000312413 MYH7BA7E2Y1 1941 aa12.79□□□□□ -0.36
CLCN6-201ENST00000312413 VIRMAQ69YN4 1812 aaKnown RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms