RNA–Protein interactions for RNA: ENST00000311351.8

LSM1-201, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM1, Length 1,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-201ENST00000311351 STK32CQ86UX6 486 aa14.5□□□□□ -0.09
LSM1-201ENST00000311351 ADGRG3Q86Y34 549 aa14.5□□□□□ -0.09
LSM1-201ENST00000311351 C10orf111Q8N326 155 aa14.5□□□□□ -0.09
LSM1-201ENST00000311351 SLC43A2Q8N370 569 aa14.5□□□□□ -0.09
LSM1-201ENST00000311351 MAL2Q969L2 176 aa14.5□□□□□ -0.09
LSM1-201ENST00000311351 ZNF775Q96BV0 537 aaPredicted RBP14.5□□□□□ -0.09
LSM1-201ENST00000311351 HS3ST6Q96QI5 342 aa14.5□□□□□ -0.09
LSM1-201ENST00000311351 SLC52A3Q9NQ40 469 aa14.5□□□□□ -0.09
LSM1-201ENST00000311351 ZNF226Q9NYT6 803 aa14.5□□□□□ -0.09
LSM1-201ENST00000311351 CALML5Q9NZT1 146 aa14.5□□□□□ -0.09
LSM1-201ENST00000311351 KLHL9Q9P2J3 617 aa14.5□□□□□ -0.09
LSM1-201ENST00000311351 SPIN1Q9Y657 262 aaPredicted RBP14.5□□□□□ -0.09
LSM1-201ENST00000311351 TMED7-TICAM2A0A0A6YYA0 188 aa14.49□□□□□ -0.09
LSM1-201ENST00000311351 TMEM72A0PK05 275 aa14.49□□□□□ -0.09
LSM1-201ENST00000311351 CDHR4A6H8M9 788 aa14.49□□□□□ -0.09
LSM1-201ENST00000311351 CFAP73A6NFT4 308 aa14.49□□□□□ -0.09
LSM1-201ENST00000311351 CYTIPO60759 359 aa14.49□□□□□ -0.09
LSM1-201ENST00000311351 RAF1P04049 648 aa14.49□□□□□ -0.09
LSM1-201ENST00000311351 YES1P07947 543 aa14.49□□□□□ -0.09
LSM1-201ENST00000311351 EDNRAP25101 427 aa14.49□□□□□ -0.09
LSM1-201ENST00000311351 TACR3P29371 465 aa14.49□□□□□ -0.09
LSM1-201ENST00000311351 ATP4BP51164 291 aa14.49□□□□□ -0.09
LSM1-201ENST00000311351 CSNK2A1P68400 391 aaPredicted RBP14.49□□□□□ -0.09
LSM1-201ENST00000311351 RASGEF1BQ0VAM2 473 aa14.49□□□□□ -0.09
LSM1-201ENST00000311351 TSC22D1Q15714 1073 aa14.49□□□□□ -0.09
LSM1-201ENST00000311351 LRIF1Q5T3J3 769 aa14.49□□□□□ -0.09
LSM1-201ENST00000311351 CXorf67Q86X51 503 aaPredicted RBP14.49□□□□□ -0.09
LSM1-201ENST00000311351 GABRG1Q8N1C3 465 aa14.49□□□□□ -0.09
LSM1-201ENST00000311351 ACTR6Q9GZN1 396 aa14.49□□□□□ -0.09
LSM1-201ENST00000311351 BCO1Q9HAY6 547 aa14.49□□□□□ -0.09
LSM1-201ENST00000311351 GP6Q9HCN6 339 aa14.49□□□□□ -0.09
LSM1-201ENST00000311351 NPHS2Q9NP85 383 aa14.49□□□□□ -0.09
LSM1-201ENST00000311351 DCTN4Q9UJW0 460 aa14.49□□□□□ -0.09
LSM1-201ENST00000311351 OSGIN1Q9UJX0 560 aa14.49□□□□□ -0.09
LSM1-201ENST00000311351 TMED7Q9Y3B3 224 aa14.49□□□□□ -0.09
LSM1-201ENST00000311351 CHST2Q9Y4C5 530 aa14.49□□□□□ -0.09
LSM1-201ENST00000311351 MTORP42345 2549 aa14.49□□□□□ -0.09
LSM1-201ENST00000311351 RAI1Q7Z5J4 1906 aaPredicted RBP14.49□□□□□ -0.09
LSM1-201ENST00000311351 ZNF814B7Z6K7 855 aa14.48□□□□□ -0.09
LSM1-201ENST00000311351 EDF1O60869 148 aaKnown RBP14.48□□□□□ -0.09
LSM1-201ENST00000311351 GCM2O75603 506 aaPredicted RBP14.48□□□□□ -0.09
LSM1-201ENST00000311351 LOXP28300 417 aaPredicted RBP14.48□□□□□ -0.09
LSM1-201ENST00000311351 POLR2HP52434 150 aaKnown RBP14.48□□□□□ -0.09
LSM1-201ENST00000311351 KEAP1Q14145 624 aa14.48□□□□□ -0.09
LSM1-201ENST00000311351 RNF220Q5VTB9 566 aa14.48□□□□□ -0.09
LSM1-201ENST00000311351 CLIP4Q8N3C7 705 aa14.48□□□□□ -0.09
LSM1-201ENST00000311351 PMM1Q92871 262 aa14.48□□□□□ -0.09
LSM1-201ENST00000311351 FOXC2Q99958 501 aa14.48□□□□□ -0.09
LSM1-201ENST00000311351 IKZF5Q9H5V7 419 aa14.48□□□□□ -0.09
LSM1-201ENST00000311351 A4GALTQ9NPC4 353 aa14.48□□□□□ -0.09
LSM1-201ENST00000311351 VAPAQ9P0L0 249 aa14.48□□□□□ -0.09
LSM1-201ENST00000311351 PRSS50Q9UI38 385 aa14.48□□□□□ -0.09
LSM1-201ENST00000311351 TRBV5-3A0A0A0MS03 114 aa14.47□□□□□ -0.09
LSM1-201ENST00000311351 ZC3H12DA2A288 527 aaKnown RBP14.47□□□□□ -0.09
LSM1-201ENST00000311351 TMEM247A6NEH6 219 aa14.47□□□□□ -0.09
LSM1-201ENST00000311351 FAAHO00519 579 aa14.47□□□□□ -0.09
LSM1-201ENST00000311351 FRS3O43559 492 aa14.47□□□□□ -0.09
LSM1-201ENST00000311351 RAMP1O60894 148 aa14.47□□□□□ -0.09
LSM1-201ENST00000311351 PMS2P2O95744 297 aa14.47□□□□□ -0.09
LSM1-201ENST00000311351 THBS1P07996 1170 aa14.47□□□□□ -0.09
LSM1-201ENST00000311351 BMP2P12643 396 aa14.47□□□□□ -0.09
LSM1-201ENST00000311351 PRG2P13727 222 aa14.47□□□□□ -0.09
LSM1-201ENST00000311351 NCF2P19878 526 aaPredicted RBP14.47□□□□□ -0.09
LSM1-201ENST00000311351 PSMB1P20618 241 aaKnown RBP14.47□□□□□ -0.09
LSM1-201ENST00000311351 SLC1A3P43003 542 aa14.47□□□□□ -0.09
LSM1-201ENST00000311351 HTR3AP46098 478 aa14.47□□□□□ -0.09
LSM1-201ENST00000311351 FADDQ13158 208 aa14.47□□□□□ -0.09
LSM1-201ENST00000311351 WFDC8Q8IUA0 241 aa14.47□□□□□ -0.09
LSM1-201ENST00000311351 ZNF440Q8IYI8 595 aa14.47□□□□□ -0.09
LSM1-201ENST00000311351 CADM2Q8N3J6 435 aa14.47□□□□□ -0.09
LSM1-201ENST00000311351 NFKBIDQ8NI38 313 aa14.47□□□□□ -0.09
LSM1-201ENST00000311351 S100PBPQ96BU1 408 aa14.47□□□□□ -0.09
LSM1-201ENST00000311351 TACO1Q9BSH4 297 aaKnown RBP14.47□□□□□ -0.09
LSM1-201ENST00000311351 CXXC4Q9H2H0 198 aa14.47□□□□□ -0.09
LSM1-201ENST00000311351 RAD21L1Q9H4I0 556 aa14.47□□□□□ -0.09
LSM1-201ENST00000311351 ZNF385DQ9H6B1 395 aa14.47□□□□□ -0.09
LSM1-201ENST00000311351 FANCFQ9NPI8 374 aa14.47□□□□□ -0.09
LSM1-201ENST00000311351 ZNF446Q9NWS9 450 aa14.47□□□□□ -0.09
LSM1-201ENST00000311351 THUMPD1Q9NXG2 353 aaKnown RBP14.47□□□□□ -0.09
LSM1-201ENST00000311351 HDGFL3Q9Y3E1 203 aa14.47□□□□□ -0.09
LSM1-201ENST00000311351 FLNAP21333 2647 aaKnown RBP14.47□□□□□ -0.09
LSM1-201ENST00000311351 ACANP16112 2415 aa14.46□□□□□ -0.09
LSM1-201ENST00000311351 A0A0G2JPF8 293 aa14.46□□□□□ -0.09
LSM1-201ENST00000311351 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.46□□□□□ -0.09
LSM1-201ENST00000311351 ZNF716A6NP11 495 aa14.46□□□□□ -0.09
LSM1-201ENST00000311351 HNRNPCL2B2RXH8 293 aa14.46□□□□□ -0.09
LSM1-201ENST00000311351 HNRNPCL3B7ZW38 293 aa14.46□□□□□ -0.09
LSM1-201ENST00000311351 HNRNPCL1O60812 293 aaKnown RBP14.46□□□□□ -0.09
LSM1-201ENST00000311351 HNRNPCL4P0DMR1 293 aa14.46□□□□□ -0.09
LSM1-201ENST00000311351 IMPDH2P12268 514 aa14.46□□□□□ -0.09
LSM1-201ENST00000311351 UQCRBP14927 111 aa14.46□□□□□ -0.09
LSM1-201ENST00000311351 ACAA2P42765 397 aaKnown RBP14.46□□□□□ -0.09
LSM1-201ENST00000311351 OR3A2P47893 321 aa14.46□□□□□ -0.09
LSM1-201ENST00000311351 OR2B6P58173 313 aa14.46□□□□□ -0.09
LSM1-201ENST00000311351 LARS2Q15031 903 aaKnown RBP14.46□□□□□ -0.09
LSM1-201ENST00000311351 GCNT6Q5T4J0 391 aa14.46□□□□□ -0.09
LSM1-201ENST00000311351 ALKBH2Q6NS38 261 aa14.46□□□□□ -0.09
LSM1-201ENST00000311351 SERPINA11Q86U17 422 aa14.46□□□□□ -0.09
LSM1-201ENST00000311351 MTDHQ86UE4 582 aaKnown RBP14.46□□□□□ -0.09
LSM1-201ENST00000311351 CCDC103Q8IW40 242 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms