RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 LAX1Q8IWV1 398 aa7.66□□□□□ -1.18
VPS41-202ENST00000310301 ZNF439Q8NDP4 499 aa7.66□□□□□ -1.18
VPS41-202ENST00000310301 OR2T4Q8NH00 348 aa7.66□□□□□ -1.18
VPS41-202ENST00000310301 MRI1Q9BV20 369 aa7.66□□□□□ -1.18
VPS41-202ENST00000310301 ARGFXA6NJG6 315 aa7.66□□□□□ -1.18
VPS41-202ENST00000310301 PRR33A8MZF0 331 aa7.66□□□□□ -1.18
VPS41-202ENST00000310301 NPIPA2E9PIF3 369 aa7.66□□□□□ -1.18
VPS41-202ENST00000310301 NPIPA3F8WFD2 350 aa7.66□□□□□ -1.18
VPS41-202ENST00000310301 RDH16O75452 317 aa7.66□□□□□ -1.18
VPS41-202ENST00000310301 ALX3O95076 343 aa7.66□□□□□ -1.18
VPS41-202ENST00000310301 DHRS4L1P0CG22 281 aa7.66□□□□□ -1.18
VPS41-202ENST00000310301 TMEM225BP0DP42 221 aa7.66□□□□□ -1.18
VPS41-202ENST00000310301 HOXB9P17482 250 aaPredicted RBP7.66□□□□□ -1.18
VPS41-202ENST00000310301 GKP32189 559 aa7.66□□□□□ -1.18
VPS41-202ENST00000310301 ETV3P41162 512 aa7.66□□□□□ -1.18
VPS41-202ENST00000310301 ERVPABLB-1P60509 514 aa7.66□□□□□ -1.18
VPS41-202ENST00000310301 DOC2AQ14183 400 aa7.66□□□□□ -1.18
VPS41-202ENST00000310301 AARDQ4LEZ3 155 aa7.66□□□□□ -1.18
VPS41-202ENST00000310301 CPT1CQ8TCG5 803 aa7.66□□□□□ -1.18
VPS41-202ENST00000310301 ZMYND19Q96E35 227 aaPredicted RBP7.66□□□□□ -1.18
VPS41-202ENST00000310301 PATZ1Q9HBE1 687 aaKnown RBP7.66□□□□□ -1.18
VPS41-202ENST00000310301 IGSF5Q9NSI5 407 aa7.66□□□□□ -1.18
VPS41-202ENST00000310301 CCL26Q9Y258 94 aa7.66□□□□□ -1.18
VPS41-202ENST00000310301 hCG_1807616A0A1W2PRN6 198 aa7.66□□□□□ -1.18
VPS41-202ENST00000310301 FAM72CH0Y354 149 aa7.66□□□□□ -1.18
VPS41-202ENST00000310301 GAPDHSO14556 408 aaPredicted RBP7.66□□□□□ -1.18
VPS41-202ENST00000310301 HTR3BO95264 441 aa7.66□□□□□ -1.18
VPS41-202ENST00000310301 HLA-DMAP28067 261 aa7.66□□□□□ -1.18
VPS41-202ENST00000310301 HOXD9P28356 352 aaPredicted RBP7.66□□□□□ -1.18
VPS41-202ENST00000310301 CX3CR1P49238 355 aa7.66□□□□□ -1.18
VPS41-202ENST00000310301 CXCR4P61073 352 aa7.66□□□□□ -1.18
VPS41-202ENST00000310301 FAM72AQ5TYM5 149 aa7.66□□□□□ -1.18
VPS41-202ENST00000310301 FAM72DQ6L9T8 149 aa7.66□□□□□ -1.18
VPS41-202ENST00000310301 UNQ6126/PRO20091Q6UXV3 157 aa7.66□□□□□ -1.18
VPS41-202ENST00000310301 FAM72BQ86X60 149 aa7.66□□□□□ -1.18
VPS41-202ENST00000310301 KDM8Q8N371 416 aa7.66□□□□□ -1.18
VPS41-202ENST00000310301 SFXN5Q8TD22 340 aa7.66□□□□□ -1.18
VPS41-202ENST00000310301 ADAMTS18Q8TE60 1221 aa7.66□□□□□ -1.18
VPS41-202ENST00000310301 C2CD4CQ8TF44 421 aa7.66□□□□□ -1.18
VPS41-202ENST00000310301 BCL7CQ8WUZ0 217 aaPredicted RBP7.66□□□□□ -1.18
VPS41-202ENST00000310301 HPSE2Q8WWQ2 592 aa7.66□□□□□ -1.18
VPS41-202ENST00000310301 TMEM234Q8WY98 164 aa7.66□□□□□ -1.18
VPS41-202ENST00000310301 SNX18Q96RF0 628 aa7.66□□□□□ -1.18
VPS41-202ENST00000310301 F2RL3Q96RI0 385 aa7.66□□□□□ -1.18
VPS41-202ENST00000310301 SORT1Q99523 831 aa7.66□□□□□ -1.18
VPS41-202ENST00000310301 ARPC5LQ9BPX5 153 aa7.66□□□□□ -1.18
VPS41-202ENST00000310301 DPH1Q9BZG8 443 aa7.66□□□□□ -1.18
VPS41-202ENST00000310301 NMNAT2Q9BZQ4 307 aa7.66□□□□□ -1.18
VPS41-202ENST00000310301 GGT3PA6NGU5 568 aa7.66□□□□□ -1.18
VPS41-202ENST00000310301 SYT7O43581 403 aa7.66□□□□□ -1.18
VPS41-202ENST00000310301 MPIG6BO95866 241 aa7.66□□□□□ -1.18
VPS41-202ENST00000310301 RAC2P15153 192 aa7.66□□□□□ -1.18
VPS41-202ENST00000310301 IVDP26440 423 aa7.66□□□□□ -1.18
VPS41-202ENST00000310301 PSMB10P40306 273 aa7.66□□□□□ -1.18
VPS41-202ENST00000310301 FOLR3P41439 243 aa7.66□□□□□ -1.18
VPS41-202ENST00000310301 INHBCP55103 352 aa7.66□□□□□ -1.18
VPS41-202ENST00000310301 CXADRP78310 365 aa7.66□□□□□ -1.18
VPS41-202ENST00000310301 NNATQ16517 81 aa7.66□□□□□ -1.18
VPS41-202ENST00000310301 OR10K2Q6IF99 312 aa7.66□□□□□ -1.18
VPS41-202ENST00000310301 FIGNL1Q6PIW4 674 aa7.66□□□□□ -1.18
VPS41-202ENST00000310301 OR56B4Q8NH76 319 aa7.66□□□□□ -1.18
VPS41-202ENST00000310301 HUS1BQ8NHY5 278 aa7.66□□□□□ -1.18
VPS41-202ENST00000310301 DOK4Q8TEW6 326 aa7.66□□□□□ -1.18
VPS41-202ENST00000310301 VPS25Q9BRG1 176 aa7.66□□□□□ -1.18
VPS41-202ENST00000310301 PTGES2Q9H7Z7 377 aa7.66□□□□□ -1.18
VPS41-202ENST00000310301 CNOT2Q9NZN8 540 aaKnown RBP7.66□□□□□ -1.18
VPS41-202ENST00000310301 B4GALT7Q9UBV7 327 aa7.66□□□□□ -1.18
VPS41-202ENST00000310301 OSGIN1Q9UJX0 560 aa7.66□□□□□ -1.18
VPS41-202ENST00000310301 NAALAD2Q9Y3Q0 740 aa7.66□□□□□ -1.18
VPS41-202ENST00000310301 TRIOBPQ9H2D6 2365 aa7.65□□□□□ -1.18
VPS41-202ENST00000310301 C17orf113A0A1B0GUU1 675 aa7.65□□□□□ -1.18
VPS41-202ENST00000310301 M0R3H8 397 aa7.65□□□□□ -1.18
VPS41-202ENST00000310301 SCO2O43819 266 aa7.65□□□□□ -1.18
VPS41-202ENST00000310301 POLR2CP19387 275 aaPredicted RBP7.65□□□□□ -1.18
VPS41-202ENST00000310301 RAB3AP20336 220 aa7.65□□□□□ -1.18
VPS41-202ENST00000310301 DDCP20711 480 aa7.65□□□□□ -1.18
VPS41-202ENST00000310301 GPX3P22352 226 aa7.65□□□□□ -1.18
VPS41-202ENST00000310301 HTR6P50406 440 aa7.65□□□□□ -1.18
VPS41-202ENST00000310301 PSPHP78330 225 aa7.65□□□□□ -1.18
VPS41-202ENST00000310301 PLP2Q04941 152 aa7.65□□□□□ -1.18
VPS41-202ENST00000310301 RAB40BQ12829 278 aa7.65□□□□□ -1.18
VPS41-202ENST00000310301 TBCEQ15813 527 aaPredicted RBP7.65□□□□□ -1.18
VPS41-202ENST00000310301 UBE2NLQ5JXB2 153 aa7.65□□□□□ -1.18
VPS41-202ENST00000310301 TTLL10Q6ZVT0 673 aa7.65□□□□□ -1.18
VPS41-202ENST00000310301 TECPR1Q7Z6L1 1165 aa7.65□□□□□ -1.18
VPS41-202ENST00000310301 TMEM200AQ86VY9 491 aa7.65□□□□□ -1.18
VPS41-202ENST00000310301 LRRC25Q8N386 305 aaPredicted RBP7.65□□□□□ -1.18
VPS41-202ENST00000310301 CHCHD4Q8N4Q1 142 aa7.65□□□□□ -1.18
VPS41-202ENST00000310301 ZNF417Q8TAU3 575 aa7.65□□□□□ -1.18
VPS41-202ENST00000310301 RNF128Q8TEB7 428 aa7.65□□□□□ -1.18
VPS41-202ENST00000310301 IMP4Q96G21 291 aaKnown RBP7.65□□□□□ -1.18
VPS41-202ENST00000310301 ACKR4Q9NPB9 350 aa7.65□□□□□ -1.18
VPS41-202ENST00000310301 SDR39U1Q9NRG7 319 aaPredicted RBP7.65□□□□□ -1.18
VPS41-202ENST00000310301 SMCO4Q9NRQ5 59 aa7.65□□□□□ -1.18
VPS41-202ENST00000310301 HS3ST2Q9Y278 367 aa7.65□□□□□ -1.18
VPS41-202ENST00000310301 RHBDD3Q9Y3P4 386 aa7.65□□□□□ -1.18
VPS41-202ENST00000310301 MYH9P35579 1960 aaKnown RBP7.65□□□□□ -1.18
VPS41-202ENST00000310301 FEZF1A0PJY2 475 aa7.65□□□□□ -1.18
VPS41-202ENST00000310301 C1orf226A1L170 272 aa7.65□□□□□ -1.18
VPS41-202ENST00000310301 C7orf72A4D263 438 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms