RNA–Protein interactions for RNA: ENST00000310169.2

CHRNA9-201, Transcript of cholinergic receptor nicotinic alpha 9 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA9, Length 2,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA9-201ENST00000310169 SRRQ9GZT4 340 aa9.03□□□□□ -0.96
CHRNA9-201ENST00000310169 RUBCNLQ9H714 662 aa9.03□□□□□ -0.96
CHRNA9-201ENST00000310169 RPRD1BQ9NQG5 326 aaKnown RBP9.03□□□□□ -0.96
CHRNA9-201ENST00000310169 ANKRD10Q9NXR5 420 aa9.03□□□□□ -0.96
CHRNA9-201ENST00000310169 NUP50Q9UKX7 468 aa9.03□□□□□ -0.96
CHRNA9-201ENST00000310169 ABCG2Q9UNQ0 655 aa9.03□□□□□ -0.96
CHRNA9-201ENST00000310169 NUP214P35658 2090 aaPredicted RBP9.03□□□□□ -0.96
CHRNA9-201ENST00000310169 CPAMD8Q8IZJ3 1885 aa9.02□□□□□ -0.96
CHRNA9-201ENST00000310169 CCDC182A6NF36 153 aa9.02□□□□□ -0.96
CHRNA9-201ENST00000310169 H3BUI4 141 aa9.02□□□□□ -0.96
CHRNA9-201ENST00000310169 HRKO00198 91 aa9.02□□□□□ -0.96
CHRNA9-201ENST00000310169 WDPCPO95876 746 aa9.02□□□□□ -0.96
CHRNA9-201ENST00000310169 IL1AP01583 271 aa9.02□□□□□ -0.96
CHRNA9-201ENST00000310169 ATP1B1P05026 303 aa9.02□□□□□ -0.96
CHRNA9-201ENST00000310169 NTSP30990 170 aa9.02□□□□□ -0.96
CHRNA9-201ENST00000310169 SOX11P35716 441 aa9.02□□□□□ -0.96
CHRNA9-201ENST00000310169 CASRP41180 1078 aa9.02□□□□□ -0.96
CHRNA9-201ENST00000310169 RORCP51449 518 aa9.02□□□□□ -0.96
CHRNA9-201ENST00000310169 RNF4P78317 190 aa9.02□□□□□ -0.96
CHRNA9-201ENST00000310169 PSPHP78330 225 aa9.02□□□□□ -0.96
CHRNA9-201ENST00000310169 RUNX1T1Q06455 604 aa9.02□□□□□ -0.96
CHRNA9-201ENST00000310169 RBBP4Q09028 425 aa9.02□□□□□ -0.96
CHRNA9-201ENST00000310169 RIN1Q13671 783 aa9.02□□□□□ -0.96
CHRNA9-201ENST00000310169 CEP78Q5JTW2 689 aa9.02□□□□□ -0.96
CHRNA9-201ENST00000310169 TMEM201Q5SNT2 666 aa9.02□□□□□ -0.96
CHRNA9-201ENST00000310169 IGFL2Q6UWQ7 119 aa9.02□□□□□ -0.96
CHRNA9-201ENST00000310169 TMPRSS11AQ6ZMR5 421 aa9.02□□□□□ -0.96
CHRNA9-201ENST00000310169 ZNF782Q6ZMW2 699 aaPredicted RBP9.02□□□□□ -0.96
CHRNA9-201ENST00000310169 SLC29A4Q7RTT9 530 aa9.02□□□□□ -0.96
CHRNA9-201ENST00000310169 PRICKLE2Q7Z3G6 844 aa9.02□□□□□ -0.96
CHRNA9-201ENST00000310169 CAMKMTQ7Z624 323 aa9.02□□□□□ -0.96
CHRNA9-201ENST00000310169 GALNT5Q7Z7M9 940 aa9.02□□□□□ -0.96
CHRNA9-201ENST00000310169 ATCAYQ86WG3 371 aa9.02□□□□□ -0.96
CHRNA9-201ENST00000310169 BEST3Q8N1M1 668 aa9.02□□□□□ -0.96
CHRNA9-201ENST00000310169 ZNF843Q8N446 348 aa9.02□□□□□ -0.96
CHRNA9-201ENST00000310169 TMEM156Q8N614 296 aa9.02□□□□□ -0.96
CHRNA9-201ENST00000310169 RBMXL3Q8N7X1 1067 aaKnown RBP9.02□□□□□ -0.96
CHRNA9-201ENST00000310169 OR8J2Q8NGG1 315 aa9.02□□□□□ -0.96
CHRNA9-201ENST00000310169 HAS2Q92819 552 aa9.02□□□□□ -0.96
CHRNA9-201ENST00000310169 UTP23Q9BRU9 249 aaKnown RBP9.02□□□□□ -0.96
CHRNA9-201ENST00000310169 REEP4Q9H6H4 257 aa9.02□□□□□ -0.96
CHRNA9-201ENST00000310169 ISYNA1Q9NPH2 558 aa9.02□□□□□ -0.96
CHRNA9-201ENST00000310169 V9GYH0 126 aa9.02□□□□□ -0.96
CHRNA9-201ENST00000310169 NBASA2RRP1 2371 aa9.02□□□□□ -0.97
CHRNA9-201ENST00000310169 SPENQ96T58 3664 aaKnown RBP9.02□□□□□ -0.97
CHRNA9-201ENST00000310169 GABRR3A8MPY1 467 aa9.02□□□□□ -0.97
CHRNA9-201ENST00000310169 ZNF670-ZNF695F2Z2N8 137 aa9.02□□□□□ -0.97
CHRNA9-201ENST00000310169 WWP2O00308 870 aa9.02□□□□□ -0.97
CHRNA9-201ENST00000310169 RFXANKO14593 260 aa9.02□□□□□ -0.97
CHRNA9-201ENST00000310169 KIAA0513O60268 411 aa9.02□□□□□ -0.97
CHRNA9-201ENST00000310169 ITGA10O75578 1167 aa9.02□□□□□ -0.97
CHRNA9-201ENST00000310169 CFL1P23528 166 aaKnown RBP9.02□□□□□ -0.97
CHRNA9-201ENST00000310169 SSTR4P31391 388 aa9.02□□□□□ -0.97
CHRNA9-201ENST00000310169 TNFSF8P32971 234 aa9.02□□□□□ -0.97
CHRNA9-201ENST00000310169 PTGER1P34995 402 aa9.02□□□□□ -0.97
CHRNA9-201ENST00000310169 RPL3P39023 403 aaKnown RBP9.02□□□□□ -0.97
CHRNA9-201ENST00000310169 RFX2P48378 723 aa9.02□□□□□ -0.97
CHRNA9-201ENST00000310169 NCBP2P52298 156 aaKnown RBP eCLIP9.02□□□□□ -0.97
CHRNA9-201ENST00000310169 NKX2-5P52952 324 aaPredicted RBP9.02□□□□□ -0.97
CHRNA9-201ENST00000310169 PTGR1Q14914 329 aa9.02□□□□□ -0.97
CHRNA9-201ENST00000310169 HLA-DQA1Q5Y7H0 255 aa9.02□□□□□ -0.97
CHRNA9-201ENST00000310169 ANKRD34AQ69YU3 496 aa9.02□□□□□ -0.97
CHRNA9-201ENST00000310169 LGI4Q8N135 537 aa9.02□□□□□ -0.97
CHRNA9-201ENST00000310169 HORMAD2Q8N7B1 307 aa9.02□□□□□ -0.97
CHRNA9-201ENST00000310169 HSH2DQ96JZ2 352 aa9.02□□□□□ -0.97
CHRNA9-201ENST00000310169 Q96MT0 163 aa9.02□□□□□ -0.97
CHRNA9-201ENST00000310169 ZNF681Q96N22 645 aa9.02□□□□□ -0.97
CHRNA9-201ENST00000310169 GAL3ST4Q96RP7 486 aa9.02□□□□□ -0.97
CHRNA9-201ENST00000310169 ZNF556Q9HAH1 456 aa9.02□□□□□ -0.97
CHRNA9-201ENST00000310169 EXD2Q9NVH0 621 aa9.02□□□□□ -0.97
CHRNA9-201ENST00000310169 TAS2R7Q9NYW3 318 aa9.02□□□□□ -0.97
CHRNA9-201ENST00000310169 IL20Q9NYY1 176 aa9.02□□□□□ -0.97
CHRNA9-201ENST00000310169 LUZP4Q9P127 313 aa9.02□□□□□ -0.97
CHRNA9-201ENST00000310169 MYOTQ9UBF9 498 aa9.02□□□□□ -0.97
CHRNA9-201ENST00000310169 BTNL2Q9UIR0 455 aa9.02□□□□□ -0.97
CHRNA9-201ENST00000310169 ZNF223Q9UK11 482 aaPredicted RBP9.02□□□□□ -0.97
CHRNA9-201ENST00000310169 CSAG2Q9Y5P2 127 aa9.02□□□□□ -0.97
CHRNA9-201ENST00000310169 AUP1Q9Y679 476 aa9.02□□□□□ -0.97
CHRNA9-201ENST00000310169 OR5H15A6NDH6 313 aa9.01□□□□□ -0.97
CHRNA9-201ENST00000310169 TTLL8A6PVC2 850 aa9.01□□□□□ -0.97
CHRNA9-201ENST00000310169 PRKNO60260 465 aaPredicted RBP9.01□□□□□ -0.97
CHRNA9-201ENST00000310169 CYP7B1O75881 506 aa9.01□□□□□ -0.97
CHRNA9-201ENST00000310169 PAHP00439 452 aa9.01□□□□□ -0.97
CHRNA9-201ENST00000310169 IGKV3-11P04433 115 aa9.01□□□□□ -0.97
CHRNA9-201ENST00000310169 CT62P0C5K7 136 aa9.01□□□□□ -0.97
CHRNA9-201ENST00000310169 EVI2BP34910 448 aa9.01□□□□□ -0.97
CHRNA9-201ENST00000310169 KIR3DL1P43629 444 aa9.01□□□□□ -0.97
CHRNA9-201ENST00000310169 CYB561P49447 251 aa9.01□□□□□ -0.97
CHRNA9-201ENST00000310169 GZMKP49863 264 aa9.01□□□□□ -0.97
CHRNA9-201ENST00000310169 MLF1P58340 268 aa9.01□□□□□ -0.97
CHRNA9-201ENST00000310169 CDC42P60953 191 aa9.01□□□□□ -0.97
CHRNA9-201ENST00000310169 SNRPGP62308 76 aaKnown RBP9.01□□□□□ -0.97
CHRNA9-201ENST00000310169 VLDLRP98155 873 aa9.01□□□□□ -0.97
CHRNA9-201ENST00000310169 MAP4K2Q12851 820 aa9.01□□□□□ -0.97
CHRNA9-201ENST00000310169 LTB4RQ15722 352 aa9.01□□□□□ -0.97
CHRNA9-201ENST00000310169 PRICKLE4Q2TBC4 344 aa9.01□□□□□ -0.97
CHRNA9-201ENST00000310169 SLC35F1Q5T1Q4 408 aa9.01□□□□□ -0.97
CHRNA9-201ENST00000310169 SLC6A19Q695T7 634 aa9.01□□□□□ -0.97
CHRNA9-201ENST00000310169 FAM111BQ6SJ93 734 aa9.01□□□□□ -0.97
CHRNA9-201ENST00000310169 ZNF600Q6ZNG1 722 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms