RNA–Protein interactions for RNA: ENST00000309422.6

VEGFB-201, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFB, Length 1,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-201ENST00000309422 RNASE6Q93091 150 aaKnown RBP17.78■□□□□ 0.44
VEGFB-201ENST00000309422 MARVELD3Q96A59 401 aa17.78■□□□□ 0.44
VEGFB-201ENST00000309422 ZNF559Q9BR84 538 aa17.78■□□□□ 0.44
VEGFB-201ENST00000309422 TAPBPLQ9BX59 468 aa17.78■□□□□ 0.44
VEGFB-201ENST00000309422 TRIM2Q9C040 744 aa17.78■□□□□ 0.44
VEGFB-201ENST00000309422 TMEM27Q9HBJ8 222 aa17.78■□□□□ 0.44
VEGFB-201ENST00000309422 SLC9A8Q9Y2E8 581 aa17.78■□□□□ 0.44
VEGFB-201ENST00000309422 COL12A1Q99715 3063 aa17.77■□□□□ 0.43
VEGFB-201ENST00000309422 A0A1W2PNR3 127 aa17.77■□□□□ 0.43
VEGFB-201ENST00000309422 ELOA3DA6NLF2 546 aaPredicted RBP17.77■□□□□ 0.43
VEGFB-201ENST00000309422 GSTA4O15217 222 aa17.77■□□□□ 0.43
VEGFB-201ENST00000309422 DNPH1O43598 174 aa17.77■□□□□ 0.43
VEGFB-201ENST00000309422 GMNNO75496 209 aa17.77■□□□□ 0.43
VEGFB-201ENST00000309422 GRNP28799 593 aaKnown RBP17.77■□□□□ 0.43
VEGFB-201ENST00000309422 KCNJ5P48544 419 aa17.77■□□□□ 0.43
VEGFB-201ENST00000309422 AGFG1P52594 562 aaKnown RBP17.77■□□□□ 0.43
VEGFB-201ENST00000309422 VEZF1Q14119 521 aa17.77■□□□□ 0.43
VEGFB-201ENST00000309422 CDSNQ15517 529 aa17.77■□□□□ 0.43
VEGFB-201ENST00000309422 ELOA3BQ3SY89 546 aa17.77■□□□□ 0.43
VEGFB-201ENST00000309422 PLXDC2Q6UX71 529 aa17.77■□□□□ 0.43
VEGFB-201ENST00000309422 HACD2Q6Y1H2 254 aa17.77■□□□□ 0.43
VEGFB-201ENST00000309422 TMPPEQ6ZT21 453 aa17.77■□□□□ 0.43
VEGFB-201ENST00000309422 FAM214BQ7L5A3 538 aa17.77■□□□□ 0.43
VEGFB-201ENST00000309422 LUZP2Q86TE4 346 aa17.77■□□□□ 0.43
VEGFB-201ENST00000309422 LIX1LQ8IVB5 337 aa17.77■□□□□ 0.43
VEGFB-201ENST00000309422 RELL2Q8NC24 303 aaPredicted RBP17.77■□□□□ 0.43
VEGFB-201ENST00000309422 ELOA3Q8NG57 546 aa17.77■□□□□ 0.43
VEGFB-201ENST00000309422 OR6K3Q8NGY3 331 aa17.77■□□□□ 0.43
VEGFB-201ENST00000309422 PROX1Q92786 737 aa17.77■□□□□ 0.43
VEGFB-201ENST00000309422 SPOCK3Q9BQ16 436 aa17.77■□□□□ 0.43
VEGFB-201ENST00000309422 MYLK2Q9H1R3 596 aa17.77■□□□□ 0.43
VEGFB-201ENST00000309422 NDE1Q9NXR1 346 aa17.77■□□□□ 0.43
VEGFB-201ENST00000309422 EMC3Q9P0I2 261 aa17.77■□□□□ 0.43
VEGFB-201ENST00000309422 OSGIN1Q9UJX0 560 aa17.77■□□□□ 0.43
VEGFB-201ENST00000309422 BAG5Q9UL15 447 aa17.77■□□□□ 0.43
VEGFB-201ENST00000309422 SYT5O00445 386 aa17.76■□□□□ 0.43
VEGFB-201ENST00000309422 FAM107AO95990 144 aa17.76■□□□□ 0.43
VEGFB-201ENST00000309422 SHC1P29353 583 aa17.76■□□□□ 0.43
VEGFB-201ENST00000309422 DIO1P49895 249 aa17.76■□□□□ 0.43
VEGFB-201ENST00000309422 PCBP3P57721 371 aaKnown RBP17.76■□□□□ 0.43
VEGFB-201ENST00000309422 MXRA7P84157 204 aa17.76■□□□□ 0.43
VEGFB-201ENST00000309422 SMYD1Q8NB12 490 aa17.76■□□□□ 0.43
VEGFB-201ENST00000309422 CCDC197Q8NCU1 140 aa17.76■□□□□ 0.43
VEGFB-201ENST00000309422 RNF128Q8TEB7 428 aa17.76■□□□□ 0.43
VEGFB-201ENST00000309422 DNAJA4Q8WW22 397 aaPredicted RBP17.76■□□□□ 0.43
VEGFB-201ENST00000309422 CCT8L2Q96SF2 557 aa17.76■□□□□ 0.43
VEGFB-201ENST00000309422 NAA11Q9BSU3 229 aaPredicted RBP17.76■□□□□ 0.43
VEGFB-201ENST00000309422 RBM24Q9BX46 236 aaKnown RBP17.76■□□□□ 0.43
VEGFB-201ENST00000309422 COQ10BQ9H8M1 238 aa17.76■□□□□ 0.43
VEGFB-201ENST00000309422 GP6Q9HCN6 339 aa17.76■□□□□ 0.43
VEGFB-201ENST00000309422 TMEM181Q9P2C4 612 aa17.76■□□□□ 0.43
VEGFB-201ENST00000309422 SPTAN1Q13813 2472 aaKnown RBP17.76■□□□□ 0.43
VEGFB-201ENST00000309422 PHF3Q92576 2039 aaKnown RBP17.75■□□□□ 0.43
VEGFB-201ENST00000309422 ELOVL7A1L3X0 281 aa17.75■□□□□ 0.43
VEGFB-201ENST00000309422 M0QX08 132 aa17.75■□□□□ 0.43
VEGFB-201ENST00000309422 MSTNO14793 375 aa17.75■□□□□ 0.43
VEGFB-201ENST00000309422 FRS3O43559 492 aa17.75■□□□□ 0.43
VEGFB-201ENST00000309422 EIF1BO60739 113 aaKnown RBP17.75■□□□□ 0.43
VEGFB-201ENST00000309422 SS18L1O75177 396 aaPredicted RBP17.75■□□□□ 0.43
VEGFB-201ENST00000309422 AQP8O94778 261 aa17.75■□□□□ 0.43
VEGFB-201ENST00000309422 PRKD3O94806 890 aa17.75■□□□□ 0.43
VEGFB-201ENST00000309422 PMS2P2O95744 297 aa17.75■□□□□ 0.43
VEGFB-201ENST00000309422 OPN1SWP03999 348 aa17.75■□□□□ 0.43
VEGFB-201ENST00000309422 C8BP07358 591 aa17.75■□□□□ 0.43
VEGFB-201ENST00000309422 PNMTP11086 282 aa17.75■□□□□ 0.43
VEGFB-201ENST00000309422 IDUAP35475 653 aa17.75■□□□□ 0.43
VEGFB-201ENST00000309422 MNAT1P51948 309 aa17.75■□□□□ 0.43
VEGFB-201ENST00000309422 OR2B6P58173 313 aa17.75■□□□□ 0.43
VEGFB-201ENST00000309422 SLC35A1P78382 337 aa17.75■□□□□ 0.43
VEGFB-201ENST00000309422 PLAURQ03405 335 aa17.75■□□□□ 0.43
VEGFB-201ENST00000309422 FOXF2Q12947 444 aa17.75■□□□□ 0.43
VEGFB-201ENST00000309422 MYBPHQ13203 477 aa17.75■□□□□ 0.43
VEGFB-201ENST00000309422 LRRC23Q53EV4 343 aaPredicted RBP17.75■□□□□ 0.43
VEGFB-201ENST00000309422 GDF7Q7Z4P5 450 aa17.75■□□□□ 0.43
VEGFB-201ENST00000309422 PIGWQ7Z7B1 504 aa17.75■□□□□ 0.43
VEGFB-201ENST00000309422 PIGXQ8TBF5 258 aa17.75■□□□□ 0.43
VEGFB-201ENST00000309422 LZICQ8WZA0 190 aa17.75■□□□□ 0.43
VEGFB-201ENST00000309422 SRXN1Q9BYN0 137 aa17.75■□□□□ 0.43
VEGFB-201ENST00000309422 SPAG4Q9NPE6 437 aa17.75■□□□□ 0.43
VEGFB-201ENST00000309422 SPTBN1Q01082 2364 aaKnown RBP17.75■□□□□ 0.43
VEGFB-201ENST00000309422 USP9YO00507 2555 aaPredicted RBP17.75■□□□□ 0.43
VEGFB-201ENST00000309422 ASH1LQ9NR48 2969 aaKnown RBP17.74■□□□□ 0.43
VEGFB-201ENST00000309422 NCOA6Q14686 2063 aaPredicted RBP17.74■□□□□ 0.43
VEGFB-201ENST00000309422 PTPN13Q12923 2485 aa17.74■□□□□ 0.43
VEGFB-201ENST00000309422 A8MVM7 634 aa17.74■□□□□ 0.43
VEGFB-201ENST00000309422 MFN2O95140 757 aa17.74■□□□□ 0.43
VEGFB-201ENST00000309422 AHSA1O95433 338 aa17.74■□□□□ 0.43
VEGFB-201ENST00000309422 GPIP06744 558 aa17.74■□□□□ 0.43
VEGFB-201ENST00000309422 FESP07332 822 aa17.74■□□□□ 0.43
VEGFB-201ENST00000309422 ACAA2P42765 397 aaKnown RBP17.74■□□□□ 0.43
VEGFB-201ENST00000309422 SLC7A2P52569 658 aa17.74■□□□□ 0.43
VEGFB-201ENST00000309422 FBXL19-AS1Q494R0 122 aa17.74■□□□□ 0.43
VEGFB-201ENST00000309422 ALG10BQ5I7T1 473 aa17.74■□□□□ 0.43
VEGFB-201ENST00000309422 ZNF787Q6DD87 383 aa17.74■□□□□ 0.43
VEGFB-201ENST00000309422 C5orf46Q6UWT4 87 aa17.74■□□□□ 0.43
VEGFB-201ENST00000309422 ADGRG3Q86Y34 549 aa17.74■□□□□ 0.43
VEGFB-201ENST00000309422 TREML1Q86YW5 311 aa17.74■□□□□ 0.43
VEGFB-201ENST00000309422 ROBO4Q8WZ75 1007 aa17.74■□□□□ 0.43
VEGFB-201ENST00000309422 C12orf10Q9HB07 376 aa17.74■□□□□ 0.43
VEGFB-201ENST00000309422 C6orf203Q9P0P8 240 aaPredicted RBP17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms