RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 ASB16Q96NS5 453 aa14.85□□□□□ -0.03
USP42-201ENST00000306177 MMP28Q9H239 520 aa14.85□□□□□ -0.03
USP42-201ENST00000306177 C1GALT1Q9NS00 363 aa14.85□□□□□ -0.03
USP42-201ENST00000306177 EMC3Q9P0I2 261 aa14.85□□□□□ -0.03
USP42-201ENST00000306177 MYO7AQ13402 2215 aa14.85□□□□□ -0.03
USP42-201ENST00000306177 TMEM269A0A1B0GVZ9 245 aa14.84□□□□□ -0.03
USP42-201ENST00000306177 HMX2A2RU54 273 aa14.84□□□□□ -0.03
USP42-201ENST00000306177 SLC22A5O76082 557 aa14.84□□□□□ -0.03
USP42-201ENST00000306177 BMP4P12644 408 aa14.84□□□□□ -0.03
USP42-201ENST00000306177 MSX1P28360 303 aa14.84□□□□□ -0.03
USP42-201ENST00000306177 PKLRP30613 574 aa14.84□□□□□ -0.03
USP42-201ENST00000306177 ACVR1Q04771 509 aa14.84□□□□□ -0.03
USP42-201ENST00000306177 LTB4RQ15722 352 aa14.84□□□□□ -0.03
USP42-201ENST00000306177 DESI1Q6ICB0 168 aa14.84□□□□□ -0.03
USP42-201ENST00000306177 SLC48A1Q6P1K1 146 aa14.84□□□□□ -0.03
USP42-201ENST00000306177 FAM198BQ6UWH4 519 aa14.84□□□□□ -0.03
USP42-201ENST00000306177 FUNDC1Q8IVP5 155 aa14.84□□□□□ -0.03
USP42-201ENST00000306177 MUL1Q969V5 352 aa14.84□□□□□ -0.03
USP42-201ENST00000306177 VRK1Q99986 396 aaPredicted RBP14.84□□□□□ -0.03
USP42-201ENST00000306177 HS3ST3A1Q9Y663 406 aa14.84□□□□□ -0.03
USP42-201ENST00000306177 N4BP2Q86UW6 1770 aaPredicted RBP14.84□□□□□ -0.03
USP42-201ENST00000306177 A0A0A6YYH2 397 aa14.84□□□□□ -0.03
USP42-201ENST00000306177 A6NJ64 397 aa14.84□□□□□ -0.03
USP42-201ENST00000306177 H3BNC9 293 aa14.84□□□□□ -0.03
USP42-201ENST00000306177 SYT5O00445 386 aa14.84□□□□□ -0.03
USP42-201ENST00000306177 ACOT8O14734 319 aa14.84□□□□□ -0.03
USP42-201ENST00000306177 HPGDSO60760 199 aa14.84□□□□□ -0.03
USP42-201ENST00000306177 KNG1P01042 644 aa14.84□□□□□ -0.03
USP42-201ENST00000306177 IFNA1P01562 189 aa14.84□□□□□ -0.03
USP42-201ENST00000306177 OPN1LWP04000 364 aa14.84□□□□□ -0.03
USP42-201ENST00000306177 MLF2Q15773 248 aaPredicted RBP14.84□□□□□ -0.03
USP42-201ENST00000306177 CCSMST1Q4G0I0 132 aa14.84□□□□□ -0.03
USP42-201ENST00000306177 LHX8Q68G74 356 aa14.84□□□□□ -0.03
USP42-201ENST00000306177 ABHD17CQ6PCB6 329 aa14.84□□□□□ -0.03
USP42-201ENST00000306177 TPRA1Q86W33 373 aa14.84□□□□□ -0.03
USP42-201ENST00000306177 PDZD9Q8IXQ8 264 aa14.84□□□□□ -0.03
USP42-201ENST00000306177 TMEM38AQ9H6F2 299 aa14.84□□□□□ -0.03
USP42-201ENST00000306177 KIAA1551Q9HCM1 1747 aa14.84□□□□□ -0.03
USP42-201ENST00000306177 CNTRLQ7Z7A1 2325 aa14.84□□□□□ -0.03
USP42-201ENST00000306177 STRCP1A6NGW2 1772 aa14.84□□□□□ -0.03
USP42-201ENST00000306177 ANKRD30BLA7E2S9 258 aa14.84□□□□□ -0.03
USP42-201ENST00000306177 TP53P04637 393 aaPredicted RBP14.84□□□□□ -0.03
USP42-201ENST00000306177 F13BP05160 661 aa14.84□□□□□ -0.03
USP42-201ENST00000306177 AFF3P51826 1226 aaKnown RBP14.84□□□□□ -0.03
USP42-201ENST00000306177 C5orf46Q6UWT4 87 aa14.84□□□□□ -0.03
USP42-201ENST00000306177 TECPR1Q7Z6L1 1165 aa14.84□□□□□ -0.03
USP42-201ENST00000306177 LRRC28Q86X40 367 aaPredicted RBP14.84□□□□□ -0.03
USP42-201ENST00000306177 BRIX1Q8TDN6 353 aaKnown RBP14.84□□□□□ -0.03
USP42-201ENST00000306177 TOMM40LQ969M1 308 aa14.84□□□□□ -0.03
USP42-201ENST00000306177 TSNAXQ99598 290 aaKnown RBP14.84□□□□□ -0.03
USP42-201ENST00000306177 EIF5A2Q9GZV4 153 aaKnown RBP14.84□□□□□ -0.03
USP42-201ENST00000306177 ENKD1Q9H0I2 346 aa14.84□□□□□ -0.03
USP42-201ENST00000306177 METTL15A6NJ78 407 aa14.84□□□□□ -0.03
USP42-201ENST00000306177 H7C2Y5 167 aa14.84□□□□□ -0.03
USP42-201ENST00000306177 IGLV3-27P01718 113 aa14.84□□□□□ -0.03
USP42-201ENST00000306177 NPR2P20594 1047 aa14.84□□□□□ -0.03
USP42-201ENST00000306177 ITGB8P26012 769 aa14.84□□□□□ -0.03
USP42-201ENST00000306177 GCH1P30793 250 aa14.84□□□□□ -0.03
USP42-201ENST00000306177 PRKAR1BP31321 381 aa14.84□□□□□ -0.03
USP42-201ENST00000306177 FAM71E1Q6IPT2 247 aa14.84□□□□□ -0.03
USP42-201ENST00000306177 IL20RBQ6UXL0 311 aa14.84□□□□□ -0.03
USP42-201ENST00000306177 MISPQ8IVT2 679 aa14.84□□□□□ -0.03
USP42-201ENST00000306177 SERPINA12Q8IW75 414 aa14.84□□□□□ -0.03
USP42-201ENST00000306177 WBP2Q969T9 261 aa14.84□□□□□ -0.03
USP42-201ENST00000306177 ELOVL3Q9HB03 270 aa14.84□□□□□ -0.03
USP42-201ENST00000306177 PCDHGA6Q9Y5G7 932 aa14.84□□□□□ -0.03
USP42-201ENST00000306177 ADAMTS7Q9UKP4 1686 aa14.84□□□□□ -0.03
USP42-201ENST00000306177 GPRIN2O60269 458 aa14.83□□□□□ -0.03
USP42-201ENST00000306177 ACPPP15309 386 aa14.83□□□□□ -0.03
USP42-201ENST00000306177 CTHP32929 405 aa14.83□□□□□ -0.03
USP42-201ENST00000306177 BCL6P41182 706 aa14.83□□□□□ -0.03
USP42-201ENST00000306177 POLR2HP52434 150 aaKnown RBP14.83□□□□□ -0.03
USP42-201ENST00000306177 TGFBR3Q03167 851 aa14.83□□□□□ -0.03
USP42-201ENST00000306177 SPCS2Q15005 226 aa14.83□□□□□ -0.03
USP42-201ENST00000306177 HACD4Q5VWC8 232 aa14.83□□□□□ -0.03
USP42-201ENST00000306177 CMTM1Q8IZ96 169 aa14.83□□□□□ -0.03
USP42-201ENST00000306177 DRAXINQ8NBI3 349 aaPredicted RBP14.83□□□□□ -0.03
USP42-201ENST00000306177 TM7SF3Q9NS93 570 aa14.83□□□□□ -0.03
USP42-201ENST00000306177 PISDQ9UG56 409 aa14.83□□□□□ -0.03
USP42-201ENST00000306177 KNL1Q8NG31 2342 aa14.83□□□□□ -0.04
USP42-201ENST00000306177 LOC102723532A0A0G2JNH3 316 aa14.83□□□□□ -0.04
USP42-201ENST00000306177 PAHP00439 452 aa14.83□□□□□ -0.04
USP42-201ENST00000306177 CXCL10P02778 98 aa14.83□□□□□ -0.04
USP42-201ENST00000306177 SLC35E2P0CK97 266 aa14.83□□□□□ -0.04
USP42-201ENST00000306177 ICAM2P13598 275 aa14.83□□□□□ -0.04
USP42-201ENST00000306177 FXYD4P59646 89 aa14.83□□□□□ -0.04
USP42-201ENST00000306177 KIAA1024LP59773 190 aa14.83□□□□□ -0.04
USP42-201ENST00000306177 TRAPPC6BQ86SZ2 158 aa14.83□□□□□ -0.04
USP42-201ENST00000306177 SIMC1Q8NDZ2 872 aa14.83□□□□□ -0.04
USP42-201ENST00000306177 ULBP3Q9BZM4 244 aa14.83□□□□□ -0.04
USP42-201ENST00000306177 TUBB1Q9H4B7 451 aa14.83□□□□□ -0.04
USP42-201ENST00000306177 RGCCQ9H4X1 137 aa14.83□□□□□ -0.04
USP42-201ENST00000306177 KDM4EB2RXH2 506 aaPredicted RBP14.83□□□□□ -0.04
USP42-201ENST00000306177 F5H5P2 479 aa14.83□□□□□ -0.04
USP42-201ENST00000306177 GABRPO00591 440 aa14.83□□□□□ -0.04
USP42-201ENST00000306177 ARF1P84077 181 aaKnown RBP14.83□□□□□ -0.04
USP42-201ENST00000306177 XKR7Q5GH72 579 aa14.83□□□□□ -0.04
USP42-201ENST00000306177 COX20Q5RI15 118 aa14.83□□□□□ -0.04
USP42-201ENST00000306177 OR2G6Q5TZ20 316 aa14.83□□□□□ -0.04
USP42-201ENST00000306177 UBE2UQ5VVX9 321 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms