RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 PRKAR1BP31321 381 aa12.67□□□□□ -0.38
CHRFAM7A-201ENST00000299847 RRAS2P62070 204 aaPredicted RBP12.67□□□□□ -0.38
CHRFAM7A-201ENST00000299847 SORDQ00796 357 aa12.67□□□□□ -0.38
CHRFAM7A-201ENST00000299847 GNG13Q9P2W3 67 aa12.67□□□□□ -0.38
CHRFAM7A-201ENST00000299847 AKAP12Q02952 1782 aa12.67□□□□□ -0.38
CHRFAM7A-201ENST00000299847 CITO14578 2027 aa12.67□□□□□ -0.38
CHRFAM7A-201ENST00000299847 PLSCR5A0PG75 271 aa12.67□□□□□ -0.38
CHRFAM7A-201ENST00000299847 ANKRD33BA6NCL7 494 aa12.67□□□□□ -0.38
CHRFAM7A-201ENST00000299847 B3GALT4O96024 378 aa12.67□□□□□ -0.38
CHRFAM7A-201ENST00000299847 SNRPBP14678 240 aaKnown RBP12.67□□□□□ -0.38
CHRFAM7A-201ENST00000299847 HNRNPA1L2Q32P51 320 aaKnown RBP12.67□□□□□ -0.38
CHRFAM7A-201ENST00000299847 LYPD4Q6UWN0 246 aa12.67□□□□□ -0.38
CHRFAM7A-201ENST00000299847 ESPNLQ6ZVH7 1005 aa12.67□□□□□ -0.38
CHRFAM7A-201ENST00000299847 SERPINA11Q86U17 422 aa12.67□□□□□ -0.38
CHRFAM7A-201ENST00000299847 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.67□□□□□ -0.38
CHRFAM7A-201ENST00000299847 PGAP3Q96FM1 320 aaPredicted RBP12.67□□□□□ -0.38
CHRFAM7A-201ENST00000299847 NECTIN4Q96NY8 510 aa12.67□□□□□ -0.38
CHRFAM7A-201ENST00000299847 TINAGL1Q9GZM7 467 aaPredicted RBP12.67□□□□□ -0.38
CHRFAM7A-201ENST00000299847 C20orf27Q9GZN8 174 aa12.67□□□□□ -0.38
CHRFAM7A-201ENST00000299847 PLCXD1Q9NUJ7 323 aa12.67□□□□□ -0.38
CHRFAM7A-201ENST00000299847 CEPT1Q9Y6K0 416 aa12.67□□□□□ -0.38
CHRFAM7A-201ENST00000299847 CPMP14384 443 aa12.67□□□□□ -0.38
CHRFAM7A-201ENST00000299847 RPS25P62851 125 aaKnown RBP12.67□□□□□ -0.38
CHRFAM7A-201ENST00000299847 CNN3Q15417 329 aaKnown RBP12.67□□□□□ -0.38
CHRFAM7A-201ENST00000299847 VN1R3Q9BXE9 311 aa12.67□□□□□ -0.38
CHRFAM7A-201ENST00000299847 SLC38A1Q9H2H9 487 aa12.67□□□□□ -0.38
CHRFAM7A-201ENST00000299847 NUP188Q5SRE5 1749 aa12.67□□□□□ -0.38
CHRFAM7A-201ENST00000299847 UGDHO60701 494 aa12.67□□□□□ -0.38
CHRFAM7A-201ENST00000299847 FGF4P08620 206 aa12.67□□□□□ -0.38
CHRFAM7A-201ENST00000299847 HTR5AP47898 357 aa12.67□□□□□ -0.38
CHRFAM7A-201ENST00000299847 PGGHGQ32M88 737 aa12.67□□□□□ -0.38
CHRFAM7A-201ENST00000299847 NIPAL3Q6P499 406 aa12.67□□□□□ -0.38
CHRFAM7A-201ENST00000299847 CYS1Q717R9 158 aa12.67□□□□□ -0.38
CHRFAM7A-201ENST00000299847 SNAPC3Q92966 411 aa12.67□□□□□ -0.38
CHRFAM7A-201ENST00000299847 CLSTN3Q9BQT9 956 aa12.67□□□□□ -0.38
CHRFAM7A-201ENST00000299847 BTBD2Q9BX70 525 aa12.67□□□□□ -0.38
CHRFAM7A-201ENST00000299847 PDLIM7Q9NR12 457 aa12.67□□□□□ -0.38
CHRFAM7A-201ENST00000299847 NDUFAF4Q9P032 175 aa12.67□□□□□ -0.38
CHRFAM7A-201ENST00000299847 EMC3Q9P0I2 261 aa12.67□□□□□ -0.38
CHRFAM7A-201ENST00000299847 RCE1Q9Y256 329 aa12.67□□□□□ -0.38
CHRFAM7A-201ENST00000299847 TSPAN11A1L157 253 aa12.67□□□□□ -0.38
CHRFAM7A-201ENST00000299847 ITGB2P05107 769 aa12.67□□□□□ -0.38
CHRFAM7A-201ENST00000299847 RPE65Q16518 533 aa12.67□□□□□ -0.38
CHRFAM7A-201ENST00000299847 BCL7AQ4VC05 210 aa12.67□□□□□ -0.38
CHRFAM7A-201ENST00000299847 PAN3Q58A45 887 aaKnown RBP12.67□□□□□ -0.38
CHRFAM7A-201ENST00000299847 TSSK4Q6SA08 328 aa12.67□□□□□ -0.38
CHRFAM7A-201ENST00000299847 OR6C1Q96RD1 312 aa12.67□□□□□ -0.38
CHRFAM7A-201ENST00000299847 DNMT3BQ9UBC3 853 aaKnown RBP12.67□□□□□ -0.38
CHRFAM7A-201ENST00000299847 NSG1A0A0A6YYJ2 146 aa12.66□□□□□ -0.38
CHRFAM7A-201ENST00000299847 DRGXA6NNA5 263 aa12.66□□□□□ -0.38
CHRFAM7A-201ENST00000299847 ZNF593O00488 134 aaPredicted RBP12.66□□□□□ -0.38
CHRFAM7A-201ENST00000299847 HLA-AP01891 365 aaKnown RBP12.66□□□□□ -0.38
CHRFAM7A-201ENST00000299847 GCAP28676 217 aa12.66□□□□□ -0.38
CHRFAM7A-201ENST00000299847 KIR2DS3Q14952 304 aa12.66□□□□□ -0.38
CHRFAM7A-201ENST00000299847 C17orf99Q6UX52 265 aa12.66□□□□□ -0.38
CHRFAM7A-201ENST00000299847 C12orf45Q8N5I9 185 aaPredicted RBP12.66□□□□□ -0.38
CHRFAM7A-201ENST00000299847 SUMF2Q8NBJ7 301 aa12.66□□□□□ -0.38
CHRFAM7A-201ENST00000299847 BRIX1Q8TDN6 353 aaKnown RBP12.66□□□□□ -0.38
CHRFAM7A-201ENST00000299847 HCAR1Q9BXC0 346 aa12.66□□□□□ -0.38
CHRFAM7A-201ENST00000299847 CALHM2Q9HA72 323 aa12.66□□□□□ -0.38
CHRFAM7A-201ENST00000299847 DYNLRB1Q9NP97 96 aa12.66□□□□□ -0.38
CHRFAM7A-201ENST00000299847 BIN3Q9NQY0 253 aa12.66□□□□□ -0.38
CHRFAM7A-201ENST00000299847 CUTCQ9NTM9 273 aa12.66□□□□□ -0.38
CHRFAM7A-201ENST00000299847 A0A1W2PQ09 198 aa12.66□□□□□ -0.38
CHRFAM7A-201ENST00000299847 SURF4O15260 269 aa12.66□□□□□ -0.38
CHRFAM7A-201ENST00000299847 CD6P30203 668 aa12.66□□□□□ -0.38
CHRFAM7A-201ENST00000299847 CPOXP36551 454 aa12.66□□□□□ -0.38
CHRFAM7A-201ENST00000299847 SLC5A12Q1EHB4 618 aa12.66□□□□□ -0.38
CHRFAM7A-201ENST00000299847 TMEM176BQ3YBM2 270 aaPredicted RBP12.66□□□□□ -0.38
CHRFAM7A-201ENST00000299847 RAB41Q5JT25 222 aa12.66□□□□□ -0.38
CHRFAM7A-201ENST00000299847 CST9LP1Q5W188 147 aa12.66□□□□□ -0.38
CHRFAM7A-201ENST00000299847 LANCL3Q6ZV70 420 aa12.66□□□□□ -0.38
CHRFAM7A-201ENST00000299847 LINC00346Q8IVM7 164 aa12.66□□□□□ -0.38
CHRFAM7A-201ENST00000299847 SLC35A3Q9Y2D2 325 aa12.66□□□□□ -0.38
CHRFAM7A-201ENST00000299847 UNCXA6NJT0 531 aa12.66□□□□□ -0.38
CHRFAM7A-201ENST00000299847 B4DXG7 233 aa12.66□□□□□ -0.38
CHRFAM7A-201ENST00000299847 H0YGG7 62 aa12.66□□□□□ -0.38
CHRFAM7A-201ENST00000299847 SLC34A2O95436 690 aa12.66□□□□□ -0.38
CHRFAM7A-201ENST00000299847 SUOXP51687 545 aa12.66□□□□□ -0.38
CHRFAM7A-201ENST00000299847 EFNA3P52797 238 aa12.66□□□□□ -0.38
CHRFAM7A-201ENST00000299847 CLDN10P78369 228 aa12.66□□□□□ -0.38
CHRFAM7A-201ENST00000299847 FAM78AQ5JUQ0 283 aa12.66□□□□□ -0.38
CHRFAM7A-201ENST00000299847 SLC39A11Q8N1S5 342 aa12.66□□□□□ -0.38
CHRFAM7A-201ENST00000299847 TM7SF3Q9NS93 570 aa12.66□□□□□ -0.38
CHRFAM7A-201ENST00000299847 ZDHHC7Q9NXF8 308 aa12.66□□□□□ -0.38
CHRFAM7A-201ENST00000299847 SLC23A2Q9UGH3 650 aa12.66□□□□□ -0.38
CHRFAM7A-201ENST00000299847 KLHL33A6NCF5 533 aa12.66□□□□□ -0.38
CHRFAM7A-201ENST00000299847 TRAPPC2LH3BP13 241 aa12.66□□□□□ -0.38
CHRFAM7A-201ENST00000299847 HIST1H1TP22492 207 aaPredicted RBP12.66□□□□□ -0.38
CHRFAM7A-201ENST00000299847 SIRPAP78324 504 aa12.66□□□□□ -0.38
CHRFAM7A-201ENST00000299847 UBE2NLQ5JXB2 153 aa12.66□□□□□ -0.38
CHRFAM7A-201ENST00000299847 MARCH8Q5T0T0 291 aa12.66□□□□□ -0.38
CHRFAM7A-201ENST00000299847 FAM111BQ6SJ93 734 aa12.66□□□□□ -0.38
CHRFAM7A-201ENST00000299847 MIB2Q96AX9 1013 aa12.66□□□□□ -0.38
CHRFAM7A-201ENST00000299847 LHX3Q9UBR4 397 aa12.66□□□□□ -0.38
CHRFAM7A-201ENST00000299847 MYH1P12882 1939 aa12.66□□□□□ -0.38
CHRFAM7A-201ENST00000299847 OR7A17O14581 309 aa12.66□□□□□ -0.38
CHRFAM7A-201ENST00000299847 ADAMTS4O75173 837 aa12.66□□□□□ -0.38
CHRFAM7A-201ENST00000299847 MED6O75586 246 aa12.66□□□□□ -0.38
CHRFAM7A-201ENST00000299847 AOAHP28039 575 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms