RNA–Protein interactions for RNA: ENST00000299633.6

HDGFL3-201, Transcript of HDGF like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDGFL3, Length 12,733 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-201ENST00000299633 ACTL8Q9H568 366 aa10.53□□□□□ -0.72
HDGFL3-201ENST00000299633 TAF9BQ9HBM6 251 aa10.53□□□□□ -0.72
HDGFL3-201ENST00000299633 PDE7BQ9NP56 450 aa10.53□□□□□ -0.72
HDGFL3-201ENST00000299633 KCNG2Q9UJ96 466 aa10.53□□□□□ -0.72
HDGFL3-201ENST00000299633 ADRA1BP35368 520 aa10.53□□□□□ -0.72
HDGFL3-201ENST00000299633 GPR85P60893 370 aa10.53□□□□□ -0.72
HDGFL3-201ENST00000299633 CAP1Q01518 475 aa10.53□□□□□ -0.72
HDGFL3-201ENST00000299633 FXNQ16595 210 aa10.53□□□□□ -0.72
HDGFL3-201ENST00000299633 LRFN4Q6PJG9 635 aa10.53□□□□□ -0.72
HDGFL3-201ENST00000299633 L3MBTL4Q8NA19 623 aa10.53□□□□□ -0.72
HDGFL3-201ENST00000299633 GGHQ92820 318 aa10.53□□□□□ -0.72
HDGFL3-201ENST00000299633 CUTCQ9NTM9 273 aa10.53□□□□□ -0.72
HDGFL3-201ENST00000299633 ERVW-1Q9UQF0 538 aa10.53□□□□□ -0.72
HDGFL3-201ENST00000299633 PLSCR1O15162 318 aa10.53□□□□□ -0.72
HDGFL3-201ENST00000299633 FKBP1CQ5VVH2 108 aa10.53□□□□□ -0.72
HDGFL3-201ENST00000299633 FRG2Q64ET8 278 aa10.53□□□□□ -0.72
HDGFL3-201ENST00000299633 OR8J1Q8NGP2 316 aa10.53□□□□□ -0.72
HDGFL3-201ENST00000299633 FRG2BQ96QU4 278 aa10.53□□□□□ -0.72
HDGFL3-201ENST00000299633 CITED2Q99967 270 aaPredicted RBP10.53□□□□□ -0.72
HDGFL3-201ENST00000299633 HHATLQ9HCP6 504 aa10.53□□□□□ -0.72
HDGFL3-201ENST00000299633 NDRG3Q9UGV2 375 aa10.53□□□□□ -0.72
HDGFL3-201ENST00000299633 DENND4AQ7Z401 1863 aa10.53□□□□□ -0.72
HDGFL3-201ENST00000299633 PTAFRP25105 342 aa10.53□□□□□ -0.72
HDGFL3-201ENST00000299633 CLCNKBP51801 687 aa10.53□□□□□ -0.72
HDGFL3-201ENST00000299633 C18orf63Q68DL7 685 aa10.53□□□□□ -0.72
HDGFL3-201ENST00000299633 ZDHHC5Q9C0B5 715 aa10.53□□□□□ -0.72
HDGFL3-201ENST00000299633 GNB4Q9HAV0 340 aa10.53□□□□□ -0.72
HDGFL3-201ENST00000299633 GIMAP2Q9UG22 337 aa10.53□□□□□ -0.72
HDGFL3-201ENST00000299633 OR6C76A6NM76 312 aa10.53□□□□□ -0.72
HDGFL3-201ENST00000299633 CLDN1O95832 211 aa10.53□□□□□ -0.72
HDGFL3-201ENST00000299633 NPY1RP25929 384 aa10.53□□□□□ -0.72
HDGFL3-201ENST00000299633 MTNR1AP48039 350 aa10.53□□□□□ -0.72
HDGFL3-201ENST00000299633 MFSD6LQ8IWD5 586 aa10.53□□□□□ -0.72
HDGFL3-201ENST00000299633 IL37Q9NZH6 218 aa10.53□□□□□ -0.72
HDGFL3-201ENST00000299633 PI15O43692 258 aa10.53□□□□□ -0.72
HDGFL3-201ENST00000299633 DDNO94850 711 aaPredicted RBP10.53□□□□□ -0.72
HDGFL3-201ENST00000299633 RPL11P62913 178 aaKnown RBP10.53□□□□□ -0.72
HDGFL3-201ENST00000299633 MON1AQ86VX9 555 aa10.53□□□□□ -0.72
HDGFL3-201ENST00000299633 NPAS3Q8IXF0 933 aa10.53□□□□□ -0.72
HDGFL3-201ENST00000299633 CARFQ8N187 725 aa10.53□□□□□ -0.72
HDGFL3-201ENST00000299633 CMTM7Q96FZ5 175 aa10.53□□□□□ -0.72
HDGFL3-201ENST00000299633 SENP5Q96HI0 755 aaPredicted RBP10.53□□□□□ -0.72
HDGFL3-201ENST00000299633 DUS2Q9NX74 493 aaKnown RBP10.53□□□□□ -0.72
HDGFL3-201ENST00000299633 H3BQ06 376 aaPredicted RBP10.53□□□□□ -0.72
HDGFL3-201ENST00000299633 UGDHO60701 494 aa10.53□□□□□ -0.72
HDGFL3-201ENST00000299633 TNFSF4P23510 183 aa10.53□□□□□ -0.72
HDGFL3-201ENST00000299633 CD1BP29016 333 aa10.53□□□□□ -0.72
HDGFL3-201ENST00000299633 LIX1LQ8IVB5 337 aa10.53□□□□□ -0.72
HDGFL3-201ENST00000299633 LOC285095A0A1B0GVY8 99 aa10.53□□□□□ -0.72
HDGFL3-201ENST00000299633 HAS3O00219 553 aa10.53□□□□□ -0.72
HDGFL3-201ENST00000299633 DEFA4P12838 97 aa10.53□□□□□ -0.72
HDGFL3-201ENST00000299633 CSN1S1P47710 185 aa10.53□□□□□ -0.72
HDGFL3-201ENST00000299633 PRAMEF14Q5SWL7 426 aa10.53□□□□□ -0.72
HDGFL3-201ENST00000299633 REC114Q7Z4M0 266 aa10.53□□□□□ -0.72
HDGFL3-201ENST00000299633 LRRC52Q8N7C0 313 aa10.53□□□□□ -0.72
HDGFL3-201ENST00000299633 CLEC4CQ8WTT0 213 aa10.53□□□□□ -0.72
HDGFL3-201ENST00000299633 RNLSQ5VYX0 342 aa10.53□□□□□ -0.72
HDGFL3-201ENST00000299633 NIPA2Q8N8Q9 360 aa10.53□□□□□ -0.72
HDGFL3-201ENST00000299633 SEZ6LQ9BYH1 1024 aa10.53□□□□□ -0.72
HDGFL3-201ENST00000299633 SLC16A7O60669 478 aa10.52□□□□□ -0.72
HDGFL3-201ENST00000299633 S100A11P31949 105 aa10.52□□□□□ -0.72
HDGFL3-201ENST00000299633 GCGRP47871 477 aa10.52□□□□□ -0.72
HDGFL3-201ENST00000299633 TARBP2Q15633 366 aaKnown RBP10.52□□□□□ -0.72
HDGFL3-201ENST00000299633 NFAT5O94916 1531 aa10.52□□□□□ -0.72
HDGFL3-201ENST00000299633 TMEM82A0PJX8 343 aa10.52□□□□□ -0.72
HDGFL3-201ENST00000299633 POU6F2P78424 691 aaPredicted RBP10.52□□□□□ -0.72
HDGFL3-201ENST00000299633 LEG1Q6P5S2 330 aa10.52□□□□□ -0.72
HDGFL3-201ENST00000299633 OR14C36Q8NHC7 312 aa10.52□□□□□ -0.72
HDGFL3-201ENST00000299633 PKMYT1Q99640 499 aa10.52□□□□□ -0.72
HDGFL3-201ENST00000299633 EXOSC3Q9NQT5 275 aaKnown RBP10.52□□□□□ -0.72
HDGFL3-201ENST00000299633 SRPX2O60687 465 aaPredicted RBP10.52□□□□□ -0.72
HDGFL3-201ENST00000299633 AOC2O75106 756 aa10.52□□□□□ -0.72
HDGFL3-201ENST00000299633 EGFP01133 1207 aa10.52□□□□□ -0.72
HDGFL3-201ENST00000299633 APODP05090 189 aa10.52□□□□□ -0.72
HDGFL3-201ENST00000299633 SELPLGQ14242 412 aa10.52□□□□□ -0.72
HDGFL3-201ENST00000299633 GLYR1Q49A26 553 aaPredicted RBP10.52□□□□□ -0.72
HDGFL3-201ENST00000299633 OR2T2Q6IF00 324 aa10.52□□□□□ -0.72
HDGFL3-201ENST00000299633 OR1F2PQ96R84 312 aa10.52□□□□□ -0.72
HDGFL3-201ENST00000299633 MED1Q15648 1581 aaPredicted RBP10.52□□□□□ -0.73
HDGFL3-201ENST00000299633 OR2J3O76001 311 aa10.52□□□□□ -0.73
HDGFL3-201ENST00000299633 OLFM2O95897 454 aa10.52□□□□□ -0.73
HDGFL3-201ENST00000299633 CRYBB1P53674 252 aaPredicted RBP10.52□□□□□ -0.73
HDGFL3-201ENST00000299633 LRRC73Q5JTD7 316 aa10.52□□□□□ -0.73
HDGFL3-201ENST00000299633 TMEM244Q5VVB8 128 aa10.52□□□□□ -0.73
HDGFL3-201ENST00000299633 PRR27Q6MZM9 219 aa10.52□□□□□ -0.73
HDGFL3-201ENST00000299633 CLRN3Q8NCR9 226 aa10.52□□□□□ -0.73
HDGFL3-201ENST00000299633 SFT2D1Q8WV19 159 aa10.52□□□□□ -0.73
HDGFL3-201ENST00000299633 GAB3Q8WWW8 586 aa10.52□□□□□ -0.73
HDGFL3-201ENST00000299633 ZNF816-ZNF321PA0A0X1KG74 233 aa10.52□□□□□ -0.73
HDGFL3-201ENST00000299633 LRIT2A6NDA9 550 aa10.52□□□□□ -0.73
HDGFL3-201ENST00000299633 Q6ZN92 141 aa10.52□□□□□ -0.73
HDGFL3-201ENST00000299633 STRADAQ7RTN6 431 aa10.52□□□□□ -0.73
HDGFL3-201ENST00000299633 ZNF100Q8IYN0 542 aa10.52□□□□□ -0.73
HDGFL3-201ENST00000299633 CPA6Q8N4T0 437 aa10.52□□□□□ -0.73
HDGFL3-201ENST00000299633 ZNF321PQ8N8H1 164 aa10.52□□□□□ -0.73
HDGFL3-201ENST00000299633 OR9K2Q8NGE7 335 aa10.52□□□□□ -0.73
HDGFL3-201ENST00000299633 OR52E2Q8NGJ4 325 aa10.52□□□□□ -0.73
HDGFL3-201ENST00000299633 OR4A16Q8NH70 328 aa10.52□□□□□ -0.73
HDGFL3-201ENST00000299633 SH3YL1Q96HL8 342 aaPredicted RBP10.52□□□□□ -0.73
HDGFL3-201ENST00000299633 GSX1Q9H4S2 264 aaPredicted RBP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms