RNA–Protein interactions for RNA: ENST00000299345.10

CDH8-201, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 3,728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-201ENST00000299345 BLOC1S5-TXNDC5H3BN57 136 aa12.53□□□□□ -0.4
CDH8-201ENST00000299345 HRKO00198 91 aa12.53□□□□□ -0.4
CDH8-201ENST00000299345 DVL2O14641 736 aa12.53□□□□□ -0.4
CDH8-201ENST00000299345 PLA2G10O15496 165 aa12.53□□□□□ -0.4
CDH8-201ENST00000299345 ARHGEF9O43307 516 aa12.53□□□□□ -0.4
CDH8-201ENST00000299345 HYAL3O43820 417 aaPredicted RBP12.53□□□□□ -0.4
CDH8-201ENST00000299345 GALP22466 123 aa12.53□□□□□ -0.4
CDH8-201ENST00000299345 ELOCQ15369 112 aa12.53□□□□□ -0.4
CDH8-201ENST00000299345 Q6ZS52 159 aa12.53□□□□□ -0.4
CDH8-201ENST00000299345 PHOSPHO1Q8TCT1 267 aa12.53□□□□□ -0.4
CDH8-201ENST00000299345 HSPA12BQ96MM6 686 aa12.53□□□□□ -0.4
CDH8-201ENST00000299345 PNO1Q9NRX1 252 aaKnown RBP12.53□□□□□ -0.4
CDH8-201ENST00000299345 PRODH2Q9UF12 536 aa12.53□□□□□ -0.4
CDH8-201ENST00000299345 RANBP2P49792 3224 aaKnown RBP12.53□□□□□ -0.4
CDH8-201ENST00000299345 LRRN3E7EW58 273 aa12.53□□□□□ -0.4
CDH8-201ENST00000299345 ARL6IP5O75915 188 aa12.53□□□□□ -0.4
CDH8-201ENST00000299345 IGFBP4P22692 258 aa12.53□□□□□ -0.4
CDH8-201ENST00000299345 EDNRAP25101 427 aa12.53□□□□□ -0.4
CDH8-201ENST00000299345 DDOSTP39656 456 aa12.53□□□□□ -0.4
CDH8-201ENST00000299345 SF3A2Q15428 464 aaKnown RBP12.53□□□□□ -0.4
CDH8-201ENST00000299345 TATDN3Q17R31 274 aa12.53□□□□□ -0.4
CDH8-201ENST00000299345 RNASE12Q5GAN4 147 aaKnown RBP12.53□□□□□ -0.4
CDH8-201ENST00000299345 LRRC28Q86X40 367 aaPredicted RBP12.53□□□□□ -0.4
CDH8-201ENST00000299345 SLC2A12Q8TD20 617 aa12.53□□□□□ -0.4
CDH8-201ENST00000299345 SLC7A6Q92536 515 aa12.53□□□□□ -0.4
CDH8-201ENST00000299345 RFT1Q96AA3 541 aa12.53□□□□□ -0.4
CDH8-201ENST00000299345 ZFP3Q96NJ6 502 aa12.53□□□□□ -0.4
CDH8-201ENST00000299345 OR10A5Q9H207 317 aa12.53□□□□□ -0.4
CDH8-201ENST00000299345 LRRN3Q9H3W5 708 aa12.53□□□□□ -0.4
CDH8-201ENST00000299345 CDH23Q9H251 3354 aa12.53□□□□□ -0.4
CDH8-201ENST00000299345 SERINC4A6NH21 518 aa12.53□□□□□ -0.4
CDH8-201ENST00000299345 RAB3BP20337 219 aa12.53□□□□□ -0.4
CDH8-201ENST00000299345 PTBP1P26599 531 aaKnown RBP eCLIP12.53□□□□□ -0.4
CDH8-201ENST00000299345 RCVRNP35243 200 aa12.53□□□□□ -0.4
CDH8-201ENST00000299345 HCCSP53701 268 aa12.53□□□□□ -0.4
CDH8-201ENST00000299345 SFXN4Q6P4A7 337 aa12.53□□□□□ -0.4
CDH8-201ENST00000299345 ARL14Q8N4G2 192 aa12.53□□□□□ -0.4
CDH8-201ENST00000299345 TRMT10AQ8TBZ6 339 aaKnown RBP12.53□□□□□ -0.4
CDH8-201ENST00000299345 ADAMTS18Q8TE60 1221 aa12.53□□□□□ -0.4
CDH8-201ENST00000299345 TCTN2Q96GX1 697 aa12.53□□□□□ -0.4
CDH8-201ENST00000299345 TMEM43Q9BTV4 400 aa12.53□□□□□ -0.4
CDH8-201ENST00000299345 JAM3Q9BX67 310 aa12.53□□□□□ -0.4
CDH8-201ENST00000299345 PPP1R3EQ9H7J1 279 aa12.53□□□□□ -0.4
CDH8-201ENST00000299345 RANGRFQ9HD47 186 aaPredicted RBP12.53□□□□□ -0.4
CDH8-201ENST00000299345 A0A0G2JMP0 313 aa12.52□□□□□ -0.4
CDH8-201ENST00000299345 A0A0X1KG70 313 aa12.52□□□□□ -0.4
CDH8-201ENST00000299345 OR6C70A6NIJ9 312 aa12.52□□□□□ -0.4
CDH8-201ENST00000299345 INMT-MINDY4F8WBC2 141 aa12.52□□□□□ -0.4
CDH8-201ENST00000299345 YES1P07947 543 aa12.52□□□□□ -0.4
CDH8-201ENST00000299345 HIST1H1CP16403 213 aaKnown RBP12.52□□□□□ -0.4
CDH8-201ENST00000299345 ACTA2P62736 377 aa12.52□□□□□ -0.4
CDH8-201ENST00000299345 ACTG2P63267 376 aa12.52□□□□□ -0.4
CDH8-201ENST00000299345 GXYLT1Q4G148 440 aa12.52□□□□□ -0.4
CDH8-201ENST00000299345 TPRA1Q86W33 373 aa12.52□□□□□ -0.4
CDH8-201ENST00000299345 RDH10Q8IZV5 341 aa12.52□□□□□ -0.4
CDH8-201ENST00000299345 FAM160A2Q8N612 972 aaPredicted RBP12.52□□□□□ -0.4
CDH8-201ENST00000299345 OR4M2Q8NGB6 313 aa12.52□□□□□ -0.4
CDH8-201ENST00000299345 ZNF563Q8TA94 476 aa12.52□□□□□ -0.4
CDH8-201ENST00000299345 KCTD12Q96CX2 325 aaKnown RBP12.52□□□□□ -0.4
CDH8-201ENST00000299345 AHCYL2Q96HN2 611 aaKnown RBP12.52□□□□□ -0.4
CDH8-201ENST00000299345 LMF2Q9BU23 707 aaKnown RBP12.52□□□□□ -0.4
CDH8-201ENST00000299345 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.52□□□□□ -0.4
CDH8-201ENST00000299345 ADGRL4Q9HBW9 690 aa12.52□□□□□ -0.4
CDH8-201ENST00000299345 PAQR5Q9NXK6 330 aaPredicted RBP12.52□□□□□ -0.4
CDH8-201ENST00000299345 ING3Q9NXR8 418 aa12.52□□□□□ -0.4
CDH8-201ENST00000299345 KLHL21Q9UJP4 597 aa12.52□□□□□ -0.4
CDH8-201ENST00000299345 ADAM18Q9Y3Q7 739 aa12.52□□□□□ -0.4
CDH8-201ENST00000299345 MAU2Q9Y6X3 613 aa12.52□□□□□ -0.4
CDH8-201ENST00000299345 TRBV2A0A0J9YWF9 115 aa12.52□□□□□ -0.41
CDH8-201ENST00000299345 MAGEB4O15481 346 aaPredicted RBP12.52□□□□□ -0.41
CDH8-201ENST00000299345 FLRT2O43155 660 aa12.52□□□□□ -0.41
CDH8-201ENST00000299345 PTP4A3O75365 173 aa12.52□□□□□ -0.41
CDH8-201ENST00000299345 BICRALQ6AI39 1079 aa12.52□□□□□ -0.41
CDH8-201ENST00000299345 FAAH2Q6GMR7 532 aa12.52□□□□□ -0.41
CDH8-201ENST00000299345 JAZF1Q86VZ6 243 aa12.52□□□□□ -0.41
CDH8-201ENST00000299345 OR4C3Q8NH37 302 aa12.52□□□□□ -0.41
CDH8-201ENST00000299345 C16orf52Q8NHV5 167 aa12.52□□□□□ -0.41
CDH8-201ENST00000299345 CHAC2Q8WUX2 184 aa12.52□□□□□ -0.41
CDH8-201ENST00000299345 SNX18Q96RF0 628 aa12.52□□□□□ -0.41
CDH8-201ENST00000299345 ZNF649Q9BS31 505 aa12.52□□□□□ -0.41
CDH8-201ENST00000299345 OR8D2Q9GZM6 311 aa12.52□□□□□ -0.41
CDH8-201ENST00000299345 ABCG5Q9H222 651 aa12.52□□□□□ -0.41
CDH8-201ENST00000299345 PDE7BQ9NP56 450 aa12.52□□□□□ -0.41
CDH8-201ENST00000299345 EEF1E1O43324 174 aaKnown RBP12.52□□□□□ -0.41
CDH8-201ENST00000299345 GMFGO60234 142 aa12.52□□□□□ -0.41
CDH8-201ENST00000299345 LYPD3O95274 346 aa12.52□□□□□ -0.41
CDH8-201ENST00000299345 PAHP00439 452 aa12.52□□□□□ -0.41
CDH8-201ENST00000299345 IGKV1D-16P01601 117 aa12.52□□□□□ -0.41
CDH8-201ENST00000299345 CD53P19397 219 aa12.52□□□□□ -0.41
CDH8-201ENST00000299345 S100A1P23297 94 aa12.52□□□□□ -0.41
CDH8-201ENST00000299345 ACAA2P42765 397 aaKnown RBP12.52□□□□□ -0.41
CDH8-201ENST00000299345 PITPNBP48739 271 aa12.52□□□□□ -0.41
CDH8-201ENST00000299345 NRG3P56975 720 aa12.52□□□□□ -0.41
CDH8-201ENST00000299345 OR10A3P58181 314 aa12.52□□□□□ -0.41
CDH8-201ENST00000299345 ERVK-25P63136 954 aa12.52□□□□□ -0.41
CDH8-201ENST00000299345 GKN2Q86XP6 184 aa12.52□□□□□ -0.41
CDH8-201ENST00000299345 GRAMD2AQ8IUY3 354 aa12.52□□□□□ -0.41
CDH8-201ENST00000299345 SLC35F2Q8IXU6 374 aa12.52□□□□□ -0.41
CDH8-201ENST00000299345 LRRC17Q8N6Y2 441 aa12.52□□□□□ -0.41
CDH8-201ENST00000299345 ZNF527Q8NB42 609 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms