RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 SAGE1Q9NXZ1 904 aa4.44□□□□□ -1.7
UBR1-201ENST00000290650 ATPIF1Q9UII2 106 aa4.44□□□□□ -1.7
UBR1-201ENST00000290650 YBX2Q9Y2T7 364 aaKnown RBP4.44□□□□□ -1.7
UBR1-201ENST00000290650 ISPDA4D126 451 aa4.44□□□□□ -1.7
UBR1-201ENST00000290650 FGF17O60258 216 aa4.44□□□□□ -1.7
UBR1-201ENST00000290650 SLC16A7O60669 478 aa4.44□□□□□ -1.7
UBR1-201ENST00000290650 JMJD7P0C870 316 aa4.44□□□□□ -1.7
UBR1-201ENST00000290650 CHRNB1P11230 501 aa4.44□□□□□ -1.7
UBR1-201ENST00000290650 GPR143P51810 404 aa4.44□□□□□ -1.7
UBR1-201ENST00000290650 TLE3Q04726 772 aa4.44□□□□□ -1.7
UBR1-201ENST00000290650 EIF2B1Q14232 305 aaKnown RBP4.44□□□□□ -1.7
UBR1-201ENST00000290650 MARCH3Q86UD3 253 aa4.44□□□□□ -1.7
UBR1-201ENST00000290650 CD163Q86VB7 1156 aa4.44□□□□□ -1.7
UBR1-201ENST00000290650 MFSD9Q8NBP5 474 aa4.44□□□□□ -1.7
UBR1-201ENST00000290650 LSM14AQ8ND56 463 aaKnown RBP4.44□□□□□ -1.7
UBR1-201ENST00000290650 DUS3LQ96G46 650 aaKnown RBP4.44□□□□□ -1.7
UBR1-201ENST00000290650 COQ10AQ96MF6 247 aa4.44□□□□□ -1.7
UBR1-201ENST00000290650 OR6C1Q96RD1 312 aa4.44□□□□□ -1.7
UBR1-201ENST00000290650 GPN2Q9H9Y4 310 aaPredicted RBP4.44□□□□□ -1.7
UBR1-201ENST00000290650 ZNF226Q9NYT6 803 aa4.44□□□□□ -1.7
UBR1-201ENST00000290650 PRODH2Q9UF12 536 aa4.44□□□□□ -1.7
UBR1-201ENST00000290650 EPHA6Q9UF33 1036 aa4.44□□□□□ -1.7
UBR1-201ENST00000290650 CBLCQ9ULV8 474 aa4.44□□□□□ -1.7
UBR1-201ENST00000290650 GPR55Q9Y2T6 319 aaPredicted RBP4.44□□□□□ -1.7
UBR1-201ENST00000290650 TRBV11-1A0A0K0K1C0 115 aa4.44□□□□□ -1.7
UBR1-201ENST00000290650 SOBPA7XYQ1 873 aa4.44□□□□□ -1.7
UBR1-201ENST00000290650 STMND1H3BQB6 276 aa4.44□□□□□ -1.7
UBR1-201ENST00000290650 ARHGEF15O94989 841 aa4.44□□□□□ -1.7
UBR1-201ENST00000290650 SPNP16150 400 aa4.44□□□□□ -1.7
UBR1-201ENST00000290650 CD38P28907 300 aa4.44□□□□□ -1.7
UBR1-201ENST00000290650 GFERP55789 205 aa4.44□□□□□ -1.7
UBR1-201ENST00000290650 SF3B4Q15427 424 aaKnown RBP eCLIP4.44□□□□□ -1.73e-6■■■■□ 21.3
UBR1-201ENST00000290650 TMEM196Q5HYL7 178 aa4.44□□□□□ -1.7
UBR1-201ENST00000290650 DHRS4L2Q6PKH6 230 aa4.44□□□□□ -1.7
UBR1-201ENST00000290650 ADAMTSL4Q6UY14 1074 aa4.44□□□□□ -1.7
UBR1-201ENST00000290650 MED25Q71SY5 747 aa4.44□□□□□ -1.7
UBR1-201ENST00000290650 C19orf47Q8N9M1 422 aaKnown RBP4.44□□□□□ -1.7
UBR1-201ENST00000290650 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.44□□□□□ -1.7
UBR1-201ENST00000290650 ACOT11Q8WXI4 607 aaPredicted RBP4.44□□□□□ -1.7
UBR1-201ENST00000290650 CREB3L1Q96BA8 519 aa4.44□□□□□ -1.7
UBR1-201ENST00000290650 MSANTD3Q96H12 275 aa4.44□□□□□ -1.7
UBR1-201ENST00000290650 SLC25A44Q96H78 314 aaPredicted RBP4.44□□□□□ -1.7
UBR1-201ENST00000290650 RBM24Q9BX46 236 aaKnown RBP4.44□□□□□ -1.7
UBR1-201ENST00000290650 PLA2G12AQ9BZM1 189 aa4.44□□□□□ -1.7
UBR1-201ENST00000290650 ZNF350Q9GZX5 532 aa4.44□□□□□ -1.7
UBR1-201ENST00000290650 HSPE1-MOB4S4R3N1 261 aa4.44□□□□□ -1.7
UBR1-201ENST00000290650 TRBV5-4A0A0C4DH59 114 aa4.44□□□□□ -1.7
UBR1-201ENST00000290650 C17orf113A0A1B0GUU1 675 aa4.44□□□□□ -1.7
UBR1-201ENST00000290650 PRAMEF4O60810 478 aa4.44□□□□□ -1.7
UBR1-201ENST00000290650 GPR75O95800 540 aa4.44□□□□□ -1.7
UBR1-201ENST00000290650 SFTPBP07988 381 aa4.44□□□□□ -1.7
UBR1-201ENST00000290650 H2AFB2P0C5Z0 115 aa4.44□□□□□ -1.7
UBR1-201ENST00000290650 CCR6P51684 374 aa4.44□□□□□ -1.7
UBR1-201ENST00000290650 PRAMEF9Q5VWM5 478 aa4.44□□□□□ -1.7
UBR1-201ENST00000290650 FAAP20Q6NZ36 180 aa4.44□□□□□ -1.7
UBR1-201ENST00000290650 ARHGAP11AQ6P4F7 1023 aa4.44□□□□□ -1.7
UBR1-201ENST00000290650 ZNF793Q6ZN11 406 aa4.44□□□□□ -1.7
UBR1-201ENST00000290650 LINC01555Q8NAE3 123 aa4.44□□□□□ -1.7
UBR1-201ENST00000290650 SIMC1Q8NDZ2 872 aa4.44□□□□□ -1.7
UBR1-201ENST00000290650 SYNPRQ8TBG9 265 aa4.44□□□□□ -1.7
UBR1-201ENST00000290650 LRRC20Q8TCA0 184 aa4.44□□□□□ -1.7
UBR1-201ENST00000290650 C8orf44Q96CB5 159 aa4.44□□□□□ -1.7
UBR1-201ENST00000290650 OR14A2Q96R54 314 aa4.44□□□□□ -1.7
UBR1-201ENST00000290650 CRB3Q9BUF7 120 aa4.44□□□□□ -1.7
UBR1-201ENST00000290650 CACNG6Q9BXT2 260 aa4.44□□□□□ -1.7
UBR1-201ENST00000290650 HDAC8Q9BY41 377 aa4.44□□□□□ -1.7
UBR1-201ENST00000290650 MAN2C1Q9NTJ4 1040 aa4.44□□□□□ -1.7
UBR1-201ENST00000290650 FBXO34Q9NWN3 711 aa4.44□□□□□ -1.7
UBR1-201ENST00000290650 CCDC59Q9P031 241 aaKnown RBP4.44□□□□□ -1.7
UBR1-201ENST00000290650 PCDHGB1Q9Y5G3 927 aa4.44□□□□□ -1.7
UBR1-201ENST00000290650 MEIOCA2RUB1 952 aa4.44□□□□□ -1.7
UBR1-201ENST00000290650 OR2A25A4D2G3 310 aa4.44□□□□□ -1.7
UBR1-201ENST00000290650 LYRM1O43325 122 aa4.44□□□□□ -1.7
UBR1-201ENST00000290650 PRSS23O95084 383 aa4.44□□□□□ -1.7
UBR1-201ENST00000290650 ECDO95905 644 aaPredicted RBP4.44□□□□□ -1.7
UBR1-201ENST00000290650 CALCBP10092 127 aa4.44□□□□□ -1.7
UBR1-201ENST00000290650 S1PR1P21453 382 aa4.44□□□□□ -1.7
UBR1-201ENST00000290650 TEAD1P28347 426 aa4.44□□□□□ -1.7
UBR1-201ENST00000290650 HOXC8P31273 242 aa4.44□□□□□ -1.7
UBR1-201ENST00000290650 BSGP35613 385 aa4.44□□□□□ -1.7
UBR1-201ENST00000290650 DLX2Q07687 328 aaPredicted RBP4.44□□□□□ -1.7
UBR1-201ENST00000290650 KIR2DS3Q14952 304 aa4.44□□□□□ -1.7
UBR1-201ENST00000290650 GPNMBQ14956 572 aa4.44□□□□□ -1.7
UBR1-201ENST00000290650 ARHGAP19Q14CB8 494 aa4.44□□□□□ -1.7
UBR1-201ENST00000290650 TMEM44Q2T9K0 475 aa4.44□□□□□ -1.7
UBR1-201ENST00000290650 PCGF3Q3KNV8 242 aa4.44□□□□□ -1.7
UBR1-201ENST00000290650 LRIF1Q5T3J3 769 aa4.44□□□□□ -1.7
UBR1-201ENST00000290650 SLC48A1Q6P1K1 146 aa4.44□□□□□ -1.7
UBR1-201ENST00000290650 PRR18Q8N4B5 295 aa4.44□□□□□ -1.7
UBR1-201ENST00000290650 OR5D18Q8NGL1 313 aa4.44□□□□□ -1.7
UBR1-201ENST00000290650 HSD17B8Q92506 261 aa4.44□□□□□ -1.7
UBR1-201ENST00000290650 DAZLQ92904 295 aaKnown RBP4.44□□□□□ -1.7
UBR1-201ENST00000290650 TBC1D20Q96BZ9 403 aa4.44□□□□□ -1.7
UBR1-201ENST00000290650 EMC6Q9BV81 110 aa4.44□□□□□ -1.7
UBR1-201ENST00000290650 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.44□□□□□ -1.7
UBR1-201ENST00000290650 GALNT9Q9HCQ5 603 aa4.44□□□□□ -1.7
UBR1-201ENST00000290650 CHST2Q9Y4C5 530 aa4.44□□□□□ -1.7
UBR1-201ENST00000290650 PLXND1Q9Y4D7 1925 aa4.44□□□□□ -1.7
UBR1-201ENST00000290650 SNRNP200O75643 2136 aaKnown RBP4.44□□□□□ -1.7
UBR1-201ENST00000290650 A0A087WUU8 490 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms