RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 PRAMEF7Q5VXH5 474 aa15.38■□□□□ 0.05
SH3RF1-201ENST00000284637 TAS1R1Q7RTX1 841 aa15.38■□□□□ 0.05
SH3RF1-201ENST00000284637 TPRA1Q86W33 373 aa15.38■□□□□ 0.05
SH3RF1-201ENST00000284637 SGPP2Q8IWX5 399 aa15.38■□□□□ 0.05
SH3RF1-201ENST00000284637 UEVLDQ8IX04 471 aa15.38■□□□□ 0.05
SH3RF1-201ENST00000284637 SLCO4A1Q96BD0 722 aa15.38■□□□□ 0.05
SH3RF1-201ENST00000284637 C16orf58Q96GQ5 468 aa15.38■□□□□ 0.05
SH3RF1-201ENST00000284637 DUSP21Q9H596 190 aa15.38■□□□□ 0.05
SH3RF1-201ENST00000284637 PNMTP11086 282 aa15.38■□□□□ 0.05
SH3RF1-201ENST00000284637 TIMP2P16035 220 aa15.38■□□□□ 0.05
SH3RF1-201ENST00000284637 NTSR1P30989 418 aa15.38■□□□□ 0.05
SH3RF1-201ENST00000284637 SORDQ00796 357 aa15.38■□□□□ 0.05
SH3RF1-201ENST00000284637 DPPA4Q7L190 304 aa15.38■□□□□ 0.05
SH3RF1-201ENST00000284637 TCEAL8Q8IYN2 117 aa15.38■□□□□ 0.05
SH3RF1-201ENST00000284637 OR52E1Q8NGJ3 308 aa15.38■□□□□ 0.05
SH3RF1-201ENST00000284637 NIPSNAP1Q9BPW8 284 aa15.38■□□□□ 0.05
SH3RF1-201ENST00000284637 RTP3Q9BQQ7 232 aa15.38■□□□□ 0.05
SH3RF1-201ENST00000284637 RBM24Q9BX46 236 aaKnown RBP15.38■□□□□ 0.05
SH3RF1-201ENST00000284637 SMCO4Q9NRQ5 59 aa15.38■□□□□ 0.05
SH3RF1-201ENST00000284637 KLHL42Q9P2K6 505 aa15.38■□□□□ 0.05
SH3RF1-201ENST00000284637 ZNF225Q9UK10 706 aa15.38■□□□□ 0.05
SH3RF1-201ENST00000284637 CBY1Q9Y3M2 126 aa15.38■□□□□ 0.05
SH3RF1-201ENST00000284637 F5H5K5 113 aa15.38■□□□□ 0.05
SH3RF1-201ENST00000284637 NPC1O15118 1278 aa15.38■□□□□ 0.05
SH3RF1-201ENST00000284637 YY2O15391 372 aa15.38■□□□□ 0.05
SH3RF1-201ENST00000284637 HTR4Q13639 388 aa15.38■□□□□ 0.05
SH3RF1-201ENST00000284637 OR1Q1Q15612 314 aa15.38■□□□□ 0.05
SH3RF1-201ENST00000284637 OR8J2Q8NGG1 315 aa15.38■□□□□ 0.05
SH3RF1-201ENST00000284637 HINT2Q9BX68 163 aa15.38■□□□□ 0.05
SH3RF1-201ENST00000284637 VDAC3Q9Y277 283 aa15.38■□□□□ 0.05
SH3RF1-201ENST00000284637 ZNF705FA8MVS1 300 aaPredicted RBP15.38■□□□□ 0.05
SH3RF1-201ENST00000284637 B4DXG7 233 aa15.38■□□□□ 0.05
SH3RF1-201ENST00000284637 CLEC2LP0C7M8 214 aa15.38■□□□□ 0.05
SH3RF1-201ENST00000284637 ZNF705DP0CH99 300 aaPredicted RBP15.38■□□□□ 0.05
SH3RF1-201ENST00000284637 ZNF705BP0CI00 300 aaPredicted RBP15.38■□□□□ 0.05
SH3RF1-201ENST00000284637 CRABP1P29762 137 aa15.38■□□□□ 0.05
SH3RF1-201ENST00000284637 SFTPDP35247 375 aa15.38■□□□□ 0.05
SH3RF1-201ENST00000284637 SLC1A3P43003 542 aa15.38■□□□□ 0.05
SH3RF1-201ENST00000284637 GLO1Q04760 184 aa15.38■□□□□ 0.05
SH3RF1-201ENST00000284637 SPOCK1Q08629 439 aa15.38■□□□□ 0.05
SH3RF1-201ENST00000284637 DUSP7Q16829 419 aa15.38■□□□□ 0.05
SH3RF1-201ENST00000284637 DUSP19Q8WTR2 217 aa15.38■□□□□ 0.05
SH3RF1-201ENST00000284637 KHSRPQ92945 711 aaKnown RBP eCLIP15.38■□□□□ 0.05
SH3RF1-201ENST00000284637 DTD2Q96FN9 168 aa15.38■□□□□ 0.05
SH3RF1-201ENST00000284637 SGCZQ96LD1 299 aa15.38■□□□□ 0.05
SH3RF1-201ENST00000284637 HRH4Q9H3N8 390 aa15.38■□□□□ 0.05
SH3RF1-201ENST00000284637 GGT3PA6NGU5 568 aa15.37■□□□□ 0.05
SH3RF1-201ENST00000284637 ACOD1A6NK06 481 aa15.37■□□□□ 0.05
SH3RF1-201ENST00000284637 DUX1O43812 170 aa15.37■□□□□ 0.05
SH3RF1-201ENST00000284637 FADS1O60427 444 aa15.37■□□□□ 0.05
SH3RF1-201ENST00000284637 TSPAN31Q12999 210 aa15.37■□□□□ 0.05
SH3RF1-201ENST00000284637 C18orf63Q68DL7 685 aa15.37■□□□□ 0.05
SH3RF1-201ENST00000284637 GPR137CQ8N3F9 429 aa15.37■□□□□ 0.05
SH3RF1-201ENST00000284637 PRELID3BQ9Y3B1 194 aa15.37■□□□□ 0.05
SH3RF1-201ENST00000284637 GAPDHSO14556 408 aaPredicted RBP15.37■□□□□ 0.05
SH3RF1-201ENST00000284637 DNAJB6O75190 326 aa15.37■□□□□ 0.05
SH3RF1-201ENST00000284637 GJA5P36382 358 aa15.37■□□□□ 0.05
SH3RF1-201ENST00000284637 GAB1Q13480 694 aa15.37■□□□□ 0.05
SH3RF1-201ENST00000284637 OR52R1Q8NGF1 315 aa15.37■□□□□ 0.05
SH3RF1-201ENST00000284637 OR5L2Q8NGL0 311 aa15.37■□□□□ 0.05
SH3RF1-201ENST00000284637 OR13C2Q8NGS9 318 aa15.37■□□□□ 0.05
SH3RF1-201ENST00000284637 MICU1Q9BPX6 476 aa15.37■□□□□ 0.05
SH3RF1-201ENST00000284637 TUBB1Q9H4B7 451 aa15.37■□□□□ 0.05
SH3RF1-201ENST00000284637 LHX3Q9UBR4 397 aa15.37■□□□□ 0.05
SH3RF1-201ENST00000284637 ZNF443Q9Y2A4 671 aaPredicted RBP15.37■□□□□ 0.05
SH3RF1-201ENST00000284637 KDM3BQ7LBC6 1761 aa15.37■□□□□ 0.05
SH3RF1-201ENST00000284637 C17orf105B2RV13 164 aa15.37■□□□□ 0.05
SH3RF1-201ENST00000284637 AKR7A2O43488 359 aa15.37■□□□□ 0.05
SH3RF1-201ENST00000284637 SRPX2O60687 465 aaPredicted RBP15.37■□□□□ 0.05
SH3RF1-201ENST00000284637 EPHA1P21709 976 aa15.37■□□□□ 0.05
SH3RF1-201ENST00000284637 ARL3P36405 182 aa15.37■□□□□ 0.05
SH3RF1-201ENST00000284637 TMPPEQ6ZT21 453 aa15.37■□□□□ 0.05
SH3RF1-201ENST00000284637 TMEM200AQ86VY9 491 aa15.37■□□□□ 0.05
SH3RF1-201ENST00000284637 ADGRF3Q8IZF5 1079 aa15.37■□□□□ 0.05
SH3RF1-201ENST00000284637 TCTE3Q8IZS6 198 aa15.37■□□□□ 0.05
SH3RF1-201ENST00000284637 LILRB2Q8N423 598 aa15.37■□□□□ 0.05
SH3RF1-201ENST00000284637 PRRT1Q99946 306 aa15.37■□□□□ 0.05
SH3RF1-201ENST00000284637 NAA11Q9BSU3 229 aaPredicted RBP15.37■□□□□ 0.05
SH3RF1-201ENST00000284637 ACKR4Q9NPB9 350 aa15.37■□□□□ 0.05
SH3RF1-201ENST00000284637 TUBG2Q9NRH3 451 aa15.37■□□□□ 0.05
SH3RF1-201ENST00000284637 H3BUI4 141 aa15.37■□□□□ 0.05
SH3RF1-201ENST00000284637 HLA-AP01891 365 aaKnown RBP15.37■□□□□ 0.05
SH3RF1-201ENST00000284637 HOXD9P28356 352 aaPredicted RBP15.37■□□□□ 0.05
SH3RF1-201ENST00000284637 RPS19P39019 145 aaKnown RBP15.37■□□□□ 0.05
SH3RF1-201ENST00000284637 TAS2R31P59538 309 aa15.37■□□□□ 0.05
SH3RF1-201ENST00000284637 LTBQ06643 244 aa15.37■□□□□ 0.05
SH3RF1-201ENST00000284637 SMAD2Q15796 467 aaKnown RBP15.37■□□□□ 0.05
SH3RF1-201ENST00000284637 MEX3BQ6ZN04 569 aaKnown RBP15.37■□□□□ 0.05
SH3RF1-201ENST00000284637 RFLNAQ6ZTI6 216 aa15.37■□□□□ 0.05
SH3RF1-201ENST00000284637 PRSS42Q7Z5A4 293 aa15.37■□□□□ 0.05
SH3RF1-201ENST00000284637 LRRC56Q8IYG6 542 aaPredicted RBP15.37■□□□□ 0.05
SH3RF1-201ENST00000284637 TMEM68Q96MH6 324 aa15.37■□□□□ 0.05
SH3RF1-201ENST00000284637 AMBRA1Q9C0C7 1298 aa15.37■□□□□ 0.05
SH3RF1-201ENST00000284637 PLEKHJ1Q9NW61 149 aa15.37■□□□□ 0.05
SH3RF1-201ENST00000284637 SLC16A7O60669 478 aa15.37■□□□□ 0.05
SH3RF1-201ENST00000284637 SHC1P29353 583 aa15.37■□□□□ 0.05
SH3RF1-201ENST00000284637 AANATQ16613 207 aa15.37■□□□□ 0.05
SH3RF1-201ENST00000284637 DDIT4LQ96D03 193 aa15.37■□□□□ 0.05
SH3RF1-201ENST00000284637 CPEB1Q9BZB8 566 aaKnown RBP15.37■□□□□ 0.05
SH3RF1-201ENST00000284637 FBRSQ9HAH7 460 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms