RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 ABCD3P28288 659 aa8.77□□□□□ -1.01
TRIM55-201ENST00000276573 EMP2P54851 167 aa8.77□□□□□ -1.01
TRIM55-201ENST00000276573 RNF4P78317 190 aa8.77□□□□□ -1.01
TRIM55-201ENST00000276573 PLCXD2Q0VAA5 305 aa8.77□□□□□ -1.01
TRIM55-201ENST00000276573 ELOA3BQ3SY89 546 aa8.77□□□□□ -1.01
TRIM55-201ENST00000276573 ARMC4Q5T2S8 1044 aa8.77□□□□□ -1.01
TRIM55-201ENST00000276573 PHF19Q5T6S3 580 aa8.77□□□□□ -1.01
TRIM55-201ENST00000276573 FCRLBQ6BAA4 426 aa8.77□□□□□ -1.01
TRIM55-201ENST00000276573 B3GLCTQ6Y288 498 aa8.77□□□□□ -1.01
TRIM55-201ENST00000276573 MARCH3Q86UD3 253 aa8.77□□□□□ -1.01
TRIM55-201ENST00000276573 BPHLQ86WA6 291 aaPredicted RBP8.77□□□□□ -1.01
TRIM55-201ENST00000276573 PPP1R3BQ86XI6 285 aa8.77□□□□□ -1.01
TRIM55-201ENST00000276573 TMCO5AQ8N6Q1 288 aa8.77□□□□□ -1.01
TRIM55-201ENST00000276573 C17orf47Q8NEP4 570 aa8.77□□□□□ -1.01
TRIM55-201ENST00000276573 ELOA3Q8NG57 546 aa8.77□□□□□ -1.01
TRIM55-201ENST00000276573 TP53INP1Q96A56 240 aa8.77□□□□□ -1.01
TRIM55-201ENST00000276573 ZNF524Q96C55 264 aa8.77□□□□□ -1.01
TRIM55-201ENST00000276573 ERMAPQ96PL5 475 aaPredicted RBP8.77□□□□□ -1.01
TRIM55-201ENST00000276573 SECISBP2Q96T21 854 aaKnown RBP8.77□□□□□ -1.01
TRIM55-201ENST00000276573 TMEM43Q9BTV4 400 aa8.77□□□□□ -1.01
TRIM55-201ENST00000276573 CDADC1Q9BWV3 514 aa8.77□□□□□ -1.01
TRIM55-201ENST00000276573 ADAM19Q9H013 955 aa8.77□□□□□ -1.01
TRIM55-201ENST00000276573 APMAPQ9HDC9 416 aa8.77□□□□□ -1.01
TRIM55-201ENST00000276573 OCIAD1Q9NX40 245 aa8.77□□□□□ -1.01
TRIM55-201ENST00000276573 ERVK13-1Q9NX77 482 aa8.77□□□□□ -1.01
TRIM55-201ENST00000276573 CCDC59Q9P031 241 aaKnown RBP8.77□□□□□ -1.01
TRIM55-201ENST00000276573 ZNF337Q9Y3M9 751 aa8.77□□□□□ -1.01
TRIM55-201ENST00000276573 ZC3H12DA2A288 527 aaKnown RBP8.76□□□□□ -1.01
TRIM55-201ENST00000276573 CCDC182A6NF36 153 aa8.76□□□□□ -1.01
TRIM55-201ENST00000276573 NTN3O00634 580 aaPredicted RBP8.76□□□□□ -1.01
TRIM55-201ENST00000276573 IFNGP01579 166 aa8.76□□□□□ -1.01
TRIM55-201ENST00000276573 SYPP08247 313 aa8.76□□□□□ -1.01
TRIM55-201ENST00000276573 FGF5P12034 268 aa8.76□□□□□ -1.01
TRIM55-201ENST00000276573 NOS3P29474 1203 aa8.76□□□□□ -1.01
TRIM55-201ENST00000276573 IDUAP35475 653 aa8.76□□□□□ -1.01
TRIM55-201ENST00000276573 CD79BP40259 229 aa8.76□□□□□ -1.01
TRIM55-201ENST00000276573 SLC6A8P48029 635 aa8.76□□□□□ -1.01
TRIM55-201ENST00000276573 CCR4P51679 360 aa8.76□□□□□ -1.01
TRIM55-201ENST00000276573 ZNF117Q03924 483 aa8.76□□□□□ -1.01
TRIM55-201ENST00000276573 CRMP1Q14194 572 aa8.76□□□□□ -1.01
TRIM55-201ENST00000276573 KLHL12Q53G59 568 aa8.76□□□□□ -1.01
TRIM55-201ENST00000276573 C16orf87Q6PH81 154 aa8.76□□□□□ -1.01
TRIM55-201ENST00000276573 IGFN1Q86VF2 1251 aa8.76□□□□□ -1.01
TRIM55-201ENST00000276573 MFSD4AQ8N468 514 aa8.76□□□□□ -1.01
TRIM55-201ENST00000276573 KLHL36Q8N4N3 616 aa8.76□□□□□ -1.01
TRIM55-201ENST00000276573 OR51G2Q8NGK0 314 aa8.76□□□□□ -1.01
TRIM55-201ENST00000276573 OR52N1Q8NH53 320 aa8.76□□□□□ -1.01
TRIM55-201ENST00000276573 LIPHQ8WWY8 451 aa8.76□□□□□ -1.01
TRIM55-201ENST00000276573 METTL21AQ8WXB1 218 aa8.76□□□□□ -1.01
TRIM55-201ENST00000276573 KLHDC3Q9BQ90 382 aa8.76□□□□□ -1.01
TRIM55-201ENST00000276573 WDR12Q9GZL7 423 aaKnown RBP8.76□□□□□ -1.01
TRIM55-201ENST00000276573 OR51V1Q9H2C8 321 aa8.76□□□□□ -1.01
TRIM55-201ENST00000276573 C12orf10Q9HB07 376 aa8.76□□□□□ -1.01
TRIM55-201ENST00000276573 PALMDQ9NP74 551 aa8.76□□□□□ -1.01
TRIM55-201ENST00000276573 EXOSC4Q9NPD3 245 aaKnown RBP8.76□□□□□ -1.01
TRIM55-201ENST00000276573 CHRNA9Q9UGM1 479 aa8.76□□□□□ -1.01
TRIM55-201ENST00000276573 SSR3Q9UNL2 185 aa8.76□□□□□ -1.01
TRIM55-201ENST00000276573 SF3B6Q9Y3B4 125 aaKnown RBP8.76□□□□□ -1.01
TRIM55-201ENST00000276573 IER3IP1Q9Y5U9 82 aa8.76□□□□□ -1.01
TRIM55-201ENST00000276573 COL5A1P20908 1838 aaPredicted RBP8.76□□□□□ -1.01
TRIM55-201ENST00000276573 FER1L5A0AVI2 2057 aa8.76□□□□□ -1.01
TRIM55-201ENST00000276573 TMEM221A6NGB7 291 aa8.75□□□□□ -1.01
TRIM55-201ENST00000276573 SAGE2PA6NJ88 616 aa8.75□□□□□ -1.01
TRIM55-201ENST00000276573 SLC22A31A6NKX4 558 aa8.75□□□□□ -1.01
TRIM55-201ENST00000276573 M0R296 226 aa8.75□□□□□ -1.01
TRIM55-201ENST00000276573 NDUFB5O43674 189 aa8.75□□□□□ -1.01
TRIM55-201ENST00000276573 FADS1O60427 444 aa8.75□□□□□ -1.01
TRIM55-201ENST00000276573 BMP4P12644 408 aa8.75□□□□□ -1.01
TRIM55-201ENST00000276573 ZNF3P17036 446 aa8.75□□□□□ -1.01
TRIM55-201ENST00000276573 PAICSP22234 425 aaKnown RBP8.75□□□□□ -1.01
TRIM55-201ENST00000276573 SLC2A5P22732 501 aa8.75□□□□□ -1.01
TRIM55-201ENST00000276573 MST1P26927 711 aa8.75□□□□□ -1.01
TRIM55-201ENST00000276573 PSPHP78330 225 aa8.75□□□□□ -1.01
TRIM55-201ENST00000276573 ACSM1Q08AH1 577 aa8.75□□□□□ -1.01
TRIM55-201ENST00000276573 INAQ16352 499 aa8.75□□□□□ -1.01
TRIM55-201ENST00000276573 LCN10Q6JVE6 187 aa8.75□□□□□ -1.01
TRIM55-201ENST00000276573 ARHGAP11AQ6P4F7 1023 aa8.75□□□□□ -1.01
TRIM55-201ENST00000276573 DPY19L2P2Q6ZN68 376 aa8.75□□□□□ -1.01
TRIM55-201ENST00000276573 ACBD7Q8N6N7 88 aa8.75□□□□□ -1.01
TRIM55-201ENST00000276573 SIRT6Q8N6T7 355 aa8.75□□□□□ -1.01
TRIM55-201ENST00000276573 CYB561A3Q8NBI2 242 aa8.75□□□□□ -1.01
TRIM55-201ENST00000276573 APCDD1LQ8NCL9 501 aa8.75□□□□□ -1.01
TRIM55-201ENST00000276573 ZNF563Q8TA94 476 aa8.75□□□□□ -1.01
TRIM55-201ENST00000276573 KISS1RQ969F8 398 aaPredicted RBP8.75□□□□□ -1.01
TRIM55-201ENST00000276573 TRMT61AQ96FX7 289 aaKnown RBP8.75□□□□□ -1.01
TRIM55-201ENST00000276573 MESP1Q9BRJ9 268 aa8.75□□□□□ -1.01
TRIM55-201ENST00000276573 GTPBP2Q9BX10 602 aaKnown RBP8.75□□□□□ -1.01
TRIM55-201ENST00000276573 ASPNQ9BXN1 380 aa8.75□□□□□ -1.01
TRIM55-201ENST00000276573 TBL1XR1Q9BZK7 514 aa8.75□□□□□ -1.01
TRIM55-201ENST00000276573 SIAEQ9HAT2 523 aa8.75□□□□□ -1.01
TRIM55-201ENST00000276573 KLHL21Q9UJP4 597 aa8.75□□□□□ -1.01
TRIM55-201ENST00000276573 PPIEQ9UNP9 301 aaKnown RBP8.75□□□□□ -1.01
TRIM55-201ENST00000276573 B3GNT3Q9Y2A9 372 aa8.75□□□□□ -1.01
TRIM55-201ENST00000276573 CAB39Q9Y376 341 aaPredicted RBP8.75□□□□□ -1.01
TRIM55-201ENST00000276573 HEATR5AQ86XA9 2040 aa8.75□□□□□ -1.01
TRIM55-201ENST00000276573 OR6C70A6NIJ9 312 aa8.75□□□□□ -1.01
TRIM55-201ENST00000276573 C12orf71A8MTZ7 269 aa8.75□□□□□ -1.01
TRIM55-201ENST00000276573 MCIDASD6RGH6 385 aa8.75□□□□□ -1.01
TRIM55-201ENST00000276573 MEN1O00255 615 aa8.75□□□□□ -1.01
TRIM55-201ENST00000276573 HCRTR2O43614 444 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms