RNA–Protein interactions for RNA: ENST00000274254.9

SKP2-201, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene SKP2, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-201ENST00000274254 ZNF337Q9Y3M9 751 aa15.53■□□□□ 0.08
SKP2-201ENST00000274254 LYVE1Q9Y5Y7 322 aa15.53■□□□□ 0.08
SKP2-201ENST00000274254 COL6A6A6NMZ7 2263 aa15.53■□□□□ 0.08
SKP2-201ENST00000274254 SPENQ96T58 3664 aaKnown RBP15.53■□□□□ 0.08
SKP2-201ENST00000274254 KMT2BQ9UMN6 2715 aaPredicted RBP15.53■□□□□ 0.08
SKP2-201ENST00000274254 IGKV1D-42A0A075B6H8 117 aa15.53■□□□□ 0.08
SKP2-201ENST00000274254 TMEM72A0PK05 275 aa15.53■□□□□ 0.08
SKP2-201ENST00000274254 ELOA3DA6NLF2 546 aaPredicted RBP15.53■□□□□ 0.08
SKP2-201ENST00000274254 H0YHG0 523 aa15.53■□□□□ 0.08
SKP2-201ENST00000274254 CLOCKO15516 846 aa15.53■□□□□ 0.08
SKP2-201ENST00000274254 DEAF1O75398 565 aaPredicted RBP15.53■□□□□ 0.08
SKP2-201ENST00000274254 GADD45GO95257 159 aa15.53■□□□□ 0.08
SKP2-201ENST00000274254 CXCR1P25024 350 aa15.53■□□□□ 0.08
SKP2-201ENST00000274254 FASP25445 335 aa15.53■□□□□ 0.08
SKP2-201ENST00000274254 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.53■□□□□ 0.08
SKP2-201ENST00000274254 ELOA3BQ3SY89 546 aa15.53■□□□□ 0.08
SKP2-201ENST00000274254 C3orf33Q6P1S2 294 aa15.53■□□□□ 0.08
SKP2-201ENST00000274254 LILRA2Q8N149 483 aa15.53■□□□□ 0.08
SKP2-201ENST00000274254 ELOA3Q8NG57 546 aa15.53■□□□□ 0.08
SKP2-201ENST00000274254 OR4C15Q8NGM1 316 aa15.53■□□□□ 0.08
SKP2-201ENST00000274254 RNF217Q8TC41 542 aa15.53■□□□□ 0.08
SKP2-201ENST00000274254 SLC7A13Q8TCU3 470 aa15.53■□□□□ 0.08
SKP2-201ENST00000274254 LRTOMTQ8WZ04 291 aa15.53■□□□□ 0.08
SKP2-201ENST00000274254 GPR137Q96N19 417 aa15.53■□□□□ 0.08
SKP2-201ENST00000274254 REEP1Q9H902 201 aa15.53■□□□□ 0.08
SKP2-201ENST00000274254 NTN4Q9HB63 628 aa15.53■□□□□ 0.08
SKP2-201ENST00000274254 SERINC1Q9NRX5 453 aa15.53■□□□□ 0.08
SKP2-201ENST00000274254 TRBV4-1A0A0J9YWV2 114 aa15.52■□□□□ 0.07
SKP2-201ENST00000274254 ZNF208O43345 1280 aa15.52■□□□□ 0.07
SKP2-201ENST00000274254 NPIPB7O75200 414 aa15.52■□□□□ 0.07
SKP2-201ENST00000274254 ACTL6AO96019 429 aa15.52■□□□□ 0.07
SKP2-201ENST00000274254 LDLRP01130 860 aa15.52■□□□□ 0.07
SKP2-201ENST00000274254 FKBP2P26885 142 aaKnown RBP15.52■□□□□ 0.07
SKP2-201ENST00000274254 RBM34P42696 430 aaKnown RBP15.52■□□□□ 0.07
SKP2-201ENST00000274254 TDGF1P3P51864 188 aa15.52■□□□□ 0.07
SKP2-201ENST00000274254 RAC1P63000 192 aa15.52■□□□□ 0.07
SKP2-201ENST00000274254 EGR4Q05215 589 aa15.52■□□□□ 0.07
SKP2-201ENST00000274254 NFATC3Q12968 1075 aa15.52■□□□□ 0.07
SKP2-201ENST00000274254 GK3PQ14409 553 aa15.52■□□□□ 0.07
SKP2-201ENST00000274254 KRTCAP3Q53RY4 240 aa15.52■□□□□ 0.07
SKP2-201ENST00000274254 PRR30Q53SZ7 412 aaPredicted RBP15.52■□□□□ 0.07
SKP2-201ENST00000274254 HMBOX1Q6NT76 420 aa15.52■□□□□ 0.07
SKP2-201ENST00000274254 OR52J3Q8NH60 311 aa15.52■□□□□ 0.07
SKP2-201ENST00000274254 SLC25A43Q8WUT9 341 aaPredicted RBP15.52■□□□□ 0.07
SKP2-201ENST00000274254 TMEM255BQ8WV15 326 aa15.52■□□□□ 0.07
SKP2-201ENST00000274254 SLX1AQ9BQ83 275 aa15.52■□□□□ 0.07
SKP2-201ENST00000274254 TMEM43Q9BTV4 400 aa15.52■□□□□ 0.07
SKP2-201ENST00000274254 LDAHQ9H6V9 325 aa15.52■□□□□ 0.07
SKP2-201ENST00000274254 ASF1BQ9NVP2 202 aa15.52■□□□□ 0.07
SKP2-201ENST00000274254 SPRR3Q9UBC9 169 aa15.52■□□□□ 0.07
SKP2-201ENST00000274254 SAMHD1Q9Y3Z3 626 aaKnown RBP15.52■□□□□ 0.07
SKP2-201ENST00000274254 AP4B1Q9Y6B7 739 aa15.52■□□□□ 0.07
SKP2-201ENST00000274254 A0A087WUU8 490 aa15.51■□□□□ 0.07
SKP2-201ENST00000274254 H3BML4 177 aa15.51■□□□□ 0.07
SKP2-201ENST00000274254 TNFRSF11BO00300 401 aa15.51■□□□□ 0.07
SKP2-201ENST00000274254 AQP7O14520 342 aa15.51■□□□□ 0.07
SKP2-201ENST00000274254 PEPDP12955 493 aa15.51■□□□□ 0.07
SKP2-201ENST00000274254 BMP7P18075 431 aa15.51■□□□□ 0.07
SKP2-201ENST00000274254 CCNA2P20248 432 aa15.51■□□□□ 0.07
SKP2-201ENST00000274254 FOXD4Q12950 439 aaPredicted RBP15.51■□□□□ 0.07
SKP2-201ENST00000274254 FGD3Q5JSP0 725 aa15.51■□□□□ 0.07
SKP2-201ENST00000274254 VASNQ6EMK4 673 aa15.51■□□□□ 0.07
SKP2-201ENST00000274254 PODNL1Q6PEZ8 512 aa15.51■□□□□ 0.07
SKP2-201ENST00000274254 TMEM239Q8WW34 195 aa15.51■□□□□ 0.07
SKP2-201ENST00000274254 ACOT11Q8WXI4 607 aaPredicted RBP15.51■□□□□ 0.07
SKP2-201ENST00000274254 HS6ST2Q96MM7 605 aa15.51■□□□□ 0.07
SKP2-201ENST00000274254 EPYCQ99645 322 aa15.51■□□□□ 0.07
SKP2-201ENST00000274254 PKP2Q99959 881 aa15.51■□□□□ 0.07
SKP2-201ENST00000274254 SLC19A3Q9BZV2 496 aa15.51■□□□□ 0.07
SKP2-201ENST00000274254 TMEM185BQ9H7F4 350 aa15.51■□□□□ 0.07
SKP2-201ENST00000274254 SPIN1Q9Y657 262 aaPredicted RBP15.51■□□□□ 0.07
SKP2-201ENST00000274254 ZC3H12DA2A288 527 aaKnown RBP15.5■□□□□ 0.07
SKP2-201ENST00000274254 TTLL8A6PVC2 850 aa15.5■□□□□ 0.07
SKP2-201ENST00000274254 A8MVM7 634 aa15.5■□□□□ 0.07
SKP2-201ENST00000274254 GNGT2O14610 69 aa15.5■□□□□ 0.07
SKP2-201ENST00000274254 SHC1P29353 583 aa15.5■□□□□ 0.07
SKP2-201ENST00000274254 GCKP35557 465 aa15.5■□□□□ 0.07
SKP2-201ENST00000274254 CLK1P49759 484 aaKnown RBP15.5■□□□□ 0.07
SKP2-201ENST00000274254 LHX2P50458 406 aa15.5■□□□□ 0.07
SKP2-201ENST00000274254 IST1P53990 364 aa15.5■□□□□ 0.07
SKP2-201ENST00000274254 LSM11P83369 360 aaKnown RBP eCLIP15.5■□□□□ 0.07
SKP2-201ENST00000274254 CRYZQ08257 329 aaKnown RBP15.5■□□□□ 0.07
SKP2-201ENST00000274254 RCN1Q15293 331 aa15.5■□□□□ 0.07
SKP2-201ENST00000274254 SEC23BQ15437 767 aa15.5■□□□□ 0.07
SKP2-201ENST00000274254 SYT14P1Q58G82 188 aa15.5■□□□□ 0.07
SKP2-201ENST00000274254 DCST1Q5T197 706 aa15.5■□□□□ 0.07
SKP2-201ENST00000274254 ARHGAP11AQ6P4F7 1023 aa15.5■□□□□ 0.07
SKP2-201ENST00000274254 TTC33Q6PID6 262 aaPredicted RBP15.5■□□□□ 0.07
SKP2-201ENST00000274254 AMIGO2Q86SJ2 522 aa15.5■□□□□ 0.07
SKP2-201ENST00000274254 PQLC1Q8N2U9 271 aa15.5■□□□□ 0.07
SKP2-201ENST00000274254 STK35Q8TDR2 534 aa15.5■□□□□ 0.07
SKP2-201ENST00000274254 ABTB1Q969K4 478 aaPredicted RBP15.5■□□□□ 0.07
SKP2-201ENST00000274254 CENPNQ96H22 339 aaPredicted RBP15.5■□□□□ 0.07
SKP2-201ENST00000274254 ALPK1Q96QP1 1244 aa15.5■□□□□ 0.07
SKP2-201ENST00000274254 BDH2Q9BUT1 245 aa15.5■□□□□ 0.07
SKP2-201ENST00000274254 OR11A1Q9GZK7 315 aa15.5■□□□□ 0.07
SKP2-201ENST00000274254 EXO5Q9H790 373 aa15.5■□□□□ 0.07
SKP2-201ENST00000274254 MEPEQ9NQ76 525 aaPredicted RBP15.5■□□□□ 0.07
SKP2-201ENST00000274254 U3KQV3 271 aa15.5■□□□□ 0.07
SKP2-201ENST00000274254 SH3PXD2BA1X283 911 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms