RNA–Protein interactions for RNA: ENST00000273317.4

LIMD1-201, Transcript of LIM domains containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD1, Length 11,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-201ENST00000273317 LPCAT3Q6P1A2 487 aa7.48□□□□□ -1.21
LIMD1-201ENST00000273317 BPIFA2Q96DR5 249 aa7.48□□□□□ -1.21
LIMD1-201ENST00000273317 ACPTQ9BZG2 426 aa7.48□□□□□ -1.21
LIMD1-201ENST00000273317 ANKRD19PQ9H560 264 aa7.48□□□□□ -1.21
LIMD1-201ENST00000273317 TXNL4BQ9NX01 149 aaKnown RBP7.48□□□□□ -1.21
LIMD1-201ENST00000273317 GDE1Q9NZC3 331 aa7.48□□□□□ -1.21
LIMD1-201ENST00000273317 ZCWPW2A0A1B0GU75 182 aa7.48□□□□□ -1.21
LIMD1-201ENST00000273317 A8MVM7 634 aa7.48□□□□□ -1.21
LIMD1-201ENST00000273317 ZNF780AO75290 641 aaPredicted RBP7.48□□□□□ -1.21
LIMD1-201ENST00000273317 CSNK1DP48730 415 aa7.48□□□□□ -1.21
LIMD1-201ENST00000273317 NNATQ16517 81 aa7.48□□□□□ -1.21
LIMD1-201ENST00000273317 ZNF546Q86UE3 836 aa7.48□□□□□ -1.21
LIMD1-201ENST00000273317 CLDN22Q8N7P3 220 aa7.48□□□□□ -1.21
LIMD1-201ENST00000273317 SGCZQ96LD1 299 aa7.48□□□□□ -1.21
LIMD1-201ENST00000273317 ACSS1Q9NUB1 689 aaPredicted RBP7.48□□□□□ -1.21
LIMD1-201ENST00000273317 C2orf78A6NCI8 922 aa7.48□□□□□ -1.21
LIMD1-201ENST00000273317 SURF4O15260 269 aa7.48□□□□□ -1.21
LIMD1-201ENST00000273317 FUT1P19526 365 aa7.48□□□□□ -1.21
LIMD1-201ENST00000273317 BCKDHBP21953 392 aa7.48□□□□□ -1.21
LIMD1-201ENST00000273317 GKP32189 559 aa7.48□□□□□ -1.21
LIMD1-201ENST00000273317 MGAT3Q09327 533 aa7.48□□□□□ -1.21
LIMD1-201ENST00000273317 TMEM201Q5SNT2 666 aa7.48□□□□□ -1.21
LIMD1-201ENST00000273317 HENMT1Q5T8I9 393 aaKnown RBP7.48□□□□□ -1.21
LIMD1-201ENST00000273317 SLC30A7Q8NEW0 376 aa7.48□□□□□ -1.21
LIMD1-201ENST00000273317 OR2T11Q8NH01 316 aa7.48□□□□□ -1.21
LIMD1-201ENST00000273317 PHYHIPQ92561 330 aa7.48□□□□□ -1.21
LIMD1-201ENST00000273317 ZNF75AQ96N20 296 aa7.48□□□□□ -1.21
LIMD1-201ENST00000273317 OR5B2Q96R09 309 aa7.48□□□□□ -1.21
LIMD1-201ENST00000273317 ENKD1Q9H0I2 346 aa7.48□□□□□ -1.21
LIMD1-201ENST00000273317 TREX1Q9NSU2 369 aa7.48□□□□□ -1.21
LIMD1-201ENST00000273317 ATG2BQ96BY7 2078 aa7.48□□□□□ -1.21
LIMD1-201ENST00000273317 C17orf105B2RV13 164 aa7.48□□□□□ -1.21
LIMD1-201ENST00000273317 M0R3H8 397 aa7.48□□□□□ -1.21
LIMD1-201ENST00000273317 PIP5K1CO60331 668 aa7.48□□□□□ -1.21
LIMD1-201ENST00000273317 ACY1Q03154 408 aa7.48□□□□□ -1.21
LIMD1-201ENST00000273317 MAP4K2Q12851 820 aa7.48□□□□□ -1.21
LIMD1-201ENST00000273317 SLC22A6Q4U2R8 563 aa7.48□□□□□ -1.21
LIMD1-201ENST00000273317 PDCD1LG2Q9BQ51 273 aa7.48□□□□□ -1.21
LIMD1-201ENST00000273317 GPR45Q9Y5Y3 372 aa7.48□□□□□ -1.21
LIMD1-201ENST00000273317 A0A1W2PPV4 95 aa7.48□□□□□ -1.21
LIMD1-201ENST00000273317 HIDE1A8MVS5 230 aa7.48□□□□□ -1.21
LIMD1-201ENST00000273317 SULT2B1O00204 365 aa7.48□□□□□ -1.21
LIMD1-201ENST00000273317 STK17BO94768 372 aa7.48□□□□□ -1.21
LIMD1-201ENST00000273317 IGHEP01854 428 aa7.48□□□□□ -1.21
LIMD1-201ENST00000273317 CPMP14384 443 aa7.48□□□□□ -1.21
LIMD1-201ENST00000273317 AHRP35869 848 aa7.48□□□□□ -1.21
LIMD1-201ENST00000273317 CLDN6P56747 220 aa7.48□□□□□ -1.21
LIMD1-201ENST00000273317 AVPI1Q5T686 147 aa7.48□□□□□ -1.21
LIMD1-201ENST00000273317 ABHD17BQ5VST6 288 aa7.48□□□□□ -1.21
LIMD1-201ENST00000273317 RANBP10Q6VN20 620 aa7.48□□□□□ -1.21
LIMD1-201ENST00000273317 ASB13Q8WXK3 278 aa7.48□□□□□ -1.21
LIMD1-201ENST00000273317 H7C1Q1 480 aa7.47□□□□□ -1.21
LIMD1-201ENST00000273317 UBL3O95164 117 aa7.47□□□□□ -1.21
LIMD1-201ENST00000273317 PROS1P07225 676 aa7.47□□□□□ -1.21
LIMD1-201ENST00000273317 RD3LP0DJH9 198 aa7.47□□□□□ -1.21
LIMD1-201ENST00000273317 CDK4P11802 303 aa7.47□□□□□ -1.21
LIMD1-201ENST00000273317 GABRB3P28472 473 aa7.47□□□□□ -1.21
LIMD1-201ENST00000273317 ETV1P50549 477 aa7.47□□□□□ -1.21
LIMD1-201ENST00000273317 OR1J2Q8NGS2 313 aa7.47□□□□□ -1.21
LIMD1-201ENST00000273317 C4orf36Q96KX1 117 aa7.47□□□□□ -1.21
LIMD1-201ENST00000273317 PSD2Q9BQI7 771 aa7.47□□□□□ -1.21
LIMD1-201ENST00000273317 OR6C2Q9NZP2 312 aa7.47□□□□□ -1.21
LIMD1-201ENST00000273317 A3GALT2U3KPV4 340 aa7.47□□□□□ -1.21
LIMD1-201ENST00000273317 SPTBN2O15020 2390 aa7.47□□□□□ -1.21
LIMD1-201ENST00000273317 M0QZQ0 153 aa7.47□□□□□ -1.21
LIMD1-201ENST00000273317 MSTNO14793 375 aa7.47□□□□□ -1.21
LIMD1-201ENST00000273317 NTSR1P30989 418 aa7.47□□□□□ -1.21
LIMD1-201ENST00000273317 MS4A2Q01362 244 aa7.47□□□□□ -1.21
LIMD1-201ENST00000273317 ETFRF1Q6IPR1 90 aa7.47□□□□□ -1.21
LIMD1-201ENST00000273317 CCDC71Q8IV32 467 aaPredicted RBP7.47□□□□□ -1.21
LIMD1-201ENST00000273317 GPR174Q9BXC1 333 aa7.47□□□□□ -1.21
LIMD1-201ENST00000273317 ALOXE3Q9BYJ1 711 aa7.47□□□□□ -1.21
LIMD1-201ENST00000273317 SLC22A11Q9NSA0 550 aa7.47□□□□□ -1.21
LIMD1-201ENST00000273317 EHFQ9NZC4 300 aa7.47□□□□□ -1.21
LIMD1-201ENST00000273317 KIR2DS5A0A0G2JLQ3 304 aa7.47□□□□□ -1.21
LIMD1-201ENST00000273317 A0A0G2JNG1 304 aa7.47□□□□□ -1.21
LIMD1-201ENST00000273317 TMEM82A0PJX8 343 aa7.47□□□□□ -1.21
LIMD1-201ENST00000273317 KIR2DS3K7RE56 304 aa7.47□□□□□ -1.21
LIMD1-201ENST00000273317 HCRTO43612 131 aa7.47□□□□□ -1.21
LIMD1-201ENST00000273317 SEMA4FO95754 770 aa7.47□□□□□ -1.21
LIMD1-201ENST00000273317 HHEXQ03014 270 aa7.47□□□□□ -1.21
LIMD1-201ENST00000273317 EMX1Q04741 257 aaPredicted RBP7.47□□□□□ -1.21
LIMD1-201ENST00000273317 KIR2DS5Q14953 304 aa7.47□□□□□ -1.21
LIMD1-201ENST00000273317 ZNF852Q6ZMS4 543 aa7.47□□□□□ -1.21
LIMD1-201ENST00000273317 NKAIN3Q8N8D7 197 aa7.47□□□□□ -1.21
LIMD1-201ENST00000273317 OR6F1Q8NGZ6 308 aa7.47□□□□□ -1.21
LIMD1-201ENST00000273317 APIPQ96GX9 242 aa7.47□□□□□ -1.21
LIMD1-201ENST00000273317 BABAM2Q9NXR7 383 aa7.47□□□□□ -1.21
LIMD1-201ENST00000273317 RALGAPA1Q6GYQ0 2036 aa7.47□□□□□ -1.21
LIMD1-201ENST00000273317 RREB1Q92766 1687 aa7.47□□□□□ -1.21
LIMD1-201ENST00000273317 WASH4PA8MWX3 477 aa7.47□□□□□ -1.21
LIMD1-201ENST00000273317 TRAPPC2LH3BP13 241 aa7.47□□□□□ -1.21
LIMD1-201ENST00000273317 GJB5O95377 273 aa7.47□□□□□ -1.21
LIMD1-201ENST00000273317 SLURP2P0DP57 97 aa7.47□□□□□ -1.21
LIMD1-201ENST00000273317 NFYBP25208 207 aa7.47□□□□□ -1.21
LIMD1-201ENST00000273317 FAM199XQ6PEV8 388 aaPredicted RBP7.47□□□□□ -1.21
LIMD1-201ENST00000273317 GPRIN1Q7Z2K8 1008 aa7.47□□□□□ -1.21
LIMD1-201ENST00000273317 OR7G3Q8NG95 312 aa7.47□□□□□ -1.21
LIMD1-201ENST00000273317 GATA6Q92908 595 aa7.47□□□□□ -1.21
LIMD1-201ENST00000273317 MICU1Q9BPX6 476 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms