RNA–Protein interactions for RNA: ENST00000271628.8

SF3B4-201, Transcript of splicing factor 3b subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B4, Length 2,085 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B4-201ENST00000271628 VPS13AQ96RL7 3174 aa14.04□□□□□ -0.16
SF3B4-201ENST00000271628 FAM86C2PA6NEL3 165 aa14.03□□□□□ -0.16
SF3B4-201ENST00000271628 IDSB3KWA1 339 aa14.03□□□□□ -0.16
SF3B4-201ENST00000271628 NTN3O00634 580 aaPredicted RBP14.03□□□□□ -0.16
SF3B4-201ENST00000271628 BHLHE40O14503 412 aa14.03□□□□□ -0.16
SF3B4-201ENST00000271628 MYL12BO14950 172 aa14.03□□□□□ -0.16
SF3B4-201ENST00000271628 PRKNO60260 465 aaPredicted RBP14.03□□□□□ -0.16
SF3B4-201ENST00000271628 PTP4A3O75365 173 aa14.03□□□□□ -0.16
SF3B4-201ENST00000271628 PPM1BO75688 479 aa14.03□□□□□ -0.16
SF3B4-201ENST00000271628 MYL12AP19105 171 aa14.03□□□□□ -0.16
SF3B4-201ENST00000271628 PSMA1P25786 263 aaKnown RBP14.03□□□□□ -0.16
SF3B4-201ENST00000271628 CDH11P55287 796 aa14.03□□□□□ -0.16
SF3B4-201ENST00000271628 FXYD6P3P58550 94 aa14.03□□□□□ -0.16
SF3B4-201ENST00000271628 CRYZQ08257 329 aaKnown RBP14.03□□□□□ -0.16
SF3B4-201ENST00000271628 SPHARQ15513 63 aa14.03□□□□□ -0.16
SF3B4-201ENST00000271628 C3orf38Q5JPI3 329 aa14.03□□□□□ -0.16
SF3B4-201ENST00000271628 AKAP14Q86UN6 197 aa14.03□□□□□ -0.16
SF3B4-201ENST00000271628 SCAIQ8N9R8 606 aa14.03□□□□□ -0.16
SF3B4-201ENST00000271628 OR52I1Q8NGK6 324 aa14.03□□□□□ -0.16
SF3B4-201ENST00000271628 RNFT2Q96EX2 444 aa14.03□□□□□ -0.16
SF3B4-201ENST00000271628 CEP19Q96LK0 163 aa14.03□□□□□ -0.16
SF3B4-201ENST00000271628 SLC30A2Q9BRI3 323 aa14.03□□□□□ -0.16
SF3B4-201ENST00000271628 SEC14L4Q9UDX3 406 aa14.03□□□□□ -0.16
SF3B4-201ENST00000271628 ICAM5Q9UMF0 924 aa14.03□□□□□ -0.16
SF3B4-201ENST00000271628 TRAPPC4Q9Y296 219 aa14.03□□□□□ -0.16
SF3B4-201ENST00000271628 TSPAN2O60636 221 aa14.03□□□□□ -0.16
SF3B4-201ENST00000271628 RFPL3O75679 317 aa14.03□□□□□ -0.16
SF3B4-201ENST00000271628 GPX5O75715 221 aa14.03□□□□□ -0.16
SF3B4-201ENST00000271628 NGFRP08138 427 aa14.03□□□□□ -0.16
SF3B4-201ENST00000271628 PNMTP11086 282 aa14.03□□□□□ -0.16
SF3B4-201ENST00000271628 FGF5P12034 268 aa14.03□□□□□ -0.16
SF3B4-201ENST00000271628 TPTEP56180 551 aa14.03□□□□□ -0.16
SF3B4-201ENST00000271628 SKP2Q13309 424 aa14.03□□□□□ -0.16
SF3B4-201ENST00000271628 SHISA6Q6ZSJ9 500 aa14.03□□□□□ -0.16
SF3B4-201ENST00000271628 LANCL3Q6ZV70 420 aa14.03□□□□□ -0.16
SF3B4-201ENST00000271628 TP53INP1Q96A56 240 aa14.03□□□□□ -0.16
SF3B4-201ENST00000271628 ARSGQ96EG1 525 aa14.03□□□□□ -0.16
SF3B4-201ENST00000271628 SPEGQ15772 3267 aa14.03□□□□□ -0.16
SF3B4-201ENST00000271628 FRYLO94915 3013 aa14.03□□□□□ -0.16
SF3B4-201ENST00000271628 A0A1W2PQD3 144 aa14.02□□□□□ -0.16
SF3B4-201ENST00000271628 VSTM2BA6NLU5 285 aa14.02□□□□□ -0.16
SF3B4-201ENST00000271628 ALOX12BO75342 701 aa14.02□□□□□ -0.16
SF3B4-201ENST00000271628 IGF2P01344 180 aa14.02□□□□□ -0.16
SF3B4-201ENST00000271628 CYC1P08574 325 aa14.02□□□□□ -0.16
SF3B4-201ENST00000271628 FUT1P19526 365 aa14.02□□□□□ -0.16
SF3B4-201ENST00000271628 HTR1FP30939 366 aa14.02□□□□□ -0.16
SF3B4-201ENST00000271628 SLC6A8P48029 635 aa14.02□□□□□ -0.16
SF3B4-201ENST00000271628 SLC9A3P48764 834 aa14.02□□□□□ -0.16
SF3B4-201ENST00000271628 PLCXD2Q0VAA5 305 aa14.02□□□□□ -0.16
SF3B4-201ENST00000271628 CD226Q15762 336 aa14.02□□□□□ -0.16
SF3B4-201ENST00000271628 NDUFAF6Q330K2 333 aa14.02□□□□□ -0.16
SF3B4-201ENST00000271628 ZNF385CQ66K41 422 aaPredicted RBP14.02□□□□□ -0.16
SF3B4-201ENST00000271628 FAAH2Q6GMR7 532 aa14.02□□□□□ -0.16
SF3B4-201ENST00000271628 GID4Q8IVV7 300 aa14.02□□□□□ -0.16
SF3B4-201ENST00000271628 OR13C2Q8NGS9 318 aa14.02□□□□□ -0.16
SF3B4-201ENST00000271628 C3orf49Q96BT1 292 aa14.02□□□□□ -0.16
SF3B4-201ENST00000271628 IFT27Q9BW83 186 aa14.02□□□□□ -0.16
SF3B4-201ENST00000271628 ASPNQ9BXN1 380 aa14.02□□□□□ -0.16
SF3B4-201ENST00000271628 SEMA4CQ9C0C4 833 aa14.02□□□□□ -0.16
SF3B4-201ENST00000271628 CARD8Q9Y2G2 431 aa14.02□□□□□ -0.16
SF3B4-201ENST00000271628 DMDP11532 3685 aa14.02□□□□□ -0.17
SF3B4-201ENST00000271628 D6RAR5 112 aa14.02□□□□□ -0.17
SF3B4-201ENST00000271628 CSO75390 466 aaKnown RBP14.02□□□□□ -0.17
SF3B4-201ENST00000271628 NRG3P56975 720 aa14.02□□□□□ -0.17
SF3B4-201ENST00000271628 DESI1Q6ICB0 168 aa14.02□□□□□ -0.17
SF3B4-201ENST00000271628 CCBE1Q6UXH8 406 aaPredicted RBP14.02□□□□□ -0.17
SF3B4-201ENST00000271628 ANKRD37Q7Z713 158 aa14.02□□□□□ -0.17
SF3B4-201ENST00000271628 PRR22Q8IZ63 422 aa14.02□□□□□ -0.17
SF3B4-201ENST00000271628 ZNF441Q8N8Z8 693 aa14.02□□□□□ -0.17
SF3B4-201ENST00000271628 GATSQ8NAP1 163 aa14.02□□□□□ -0.17
SF3B4-201ENST00000271628 AGBL5Q8NDL9 886 aa14.02□□□□□ -0.17
SF3B4-201ENST00000271628 OR51A7Q8NH64 312 aa14.02□□□□□ -0.17
SF3B4-201ENST00000271628 SGTBQ96EQ0 304 aa14.02□□□□□ -0.17
SF3B4-201ENST00000271628 NRSN2Q9GZP1 204 aa14.02□□□□□ -0.17
SF3B4-201ENST00000271628 LAT2Q9GZY6 243 aa14.02□□□□□ -0.17
SF3B4-201ENST00000271628 SLC26A1Q9H2B4 701 aa14.02□□□□□ -0.17
SF3B4-201ENST00000271628 CMC2Q9NRP2 79 aa14.02□□□□□ -0.17
SF3B4-201ENST00000271628 CLEC2DQ9UHP7 191 aa14.02□□□□□ -0.17
SF3B4-201ENST00000271628 EXOSC1Q9Y3B2 195 aaKnown RBP14.02□□□□□ -0.17
SF3B4-201ENST00000271628 TMEM129A0AVI4 362 aa14.01□□□□□ -0.17
SF3B4-201ENST00000271628 CDC14CA4D256 554 aa14.01□□□□□ -0.17
SF3B4-201ENST00000271628 ALG1L2C9J202 215 aa14.01□□□□□ -0.17
SF3B4-201ENST00000271628 AGRPO00253 132 aa14.01□□□□□ -0.17
SF3B4-201ENST00000271628 CTDSP2O14595 271 aa14.01□□□□□ -0.17
SF3B4-201ENST00000271628 ICOSLGO75144 302 aa14.01□□□□□ -0.17
SF3B4-201ENST00000271628 GP1BAP07359 652 aa14.01□□□□□ -0.17
SF3B4-201ENST00000271628 ZNF883P0CG24 379 aa14.01□□□□□ -0.17
SF3B4-201ENST00000271628 SP9P0CG40 484 aa14.01□□□□□ -0.17
SF3B4-201ENST00000271628 ABCD3P28288 659 aa14.01□□□□□ -0.17
SF3B4-201ENST00000271628 SLC6A6P31641 620 aa14.01□□□□□ -0.17
SF3B4-201ENST00000271628 RORCP51449 518 aa14.01□□□□□ -0.17
SF3B4-201ENST00000271628 GAS1P54826 345 aa14.01□□□□□ -0.17
SF3B4-201ENST00000271628 EMP2P54851 167 aa14.01□□□□□ -0.17
SF3B4-201ENST00000271628 RNF4P78317 190 aa14.01□□□□□ -0.17
SF3B4-201ENST00000271628 FOXK2Q01167 660 aa14.01□□□□□ -0.17
SF3B4-201ENST00000271628 MLLT11Q13015 90 aaPredicted RBP14.01□□□□□ -0.17
SF3B4-201ENST00000271628 KCNJ8Q15842 424 aa14.01□□□□□ -0.17
SF3B4-201ENST00000271628 APOOLQ6UXV4 268 aa14.01□□□□□ -0.17
SF3B4-201ENST00000271628 GDPD3Q7L5L3 318 aa14.01□□□□□ -0.17
SF3B4-201ENST00000271628 CXXC5Q7LFL8 322 aaKnown RBP14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms