RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 CD46P15529 392 aa22.4■■□□□ 1.18
SSBP4-201ENST00000270061 ACAA2P42765 397 aaKnown RBP22.4■■□□□ 1.18
SSBP4-201ENST00000270061 TEKQ02763 1124 aa22.4■■□□□ 1.18
SSBP4-201ENST00000270061 MBOAT2Q6ZWT7 520 aa22.4■■□□□ 1.18
SSBP4-201ENST00000270061 RRM2BQ7LG56 351 aa22.4■■□□□ 1.18
SSBP4-201ENST00000270061 ENTHD1Q8IYW4 607 aa22.4■■□□□ 1.18
SSBP4-201ENST00000270061 ARMC10Q8N2F6 343 aa22.4■■□□□ 1.18
SSBP4-201ENST00000270061 EFHD2Q96C19 240 aaPredicted RBP22.4■■□□□ 1.18
SSBP4-201ENST00000270061 PRSS27Q9BQR3 290 aa22.4■■□□□ 1.18
SSBP4-201ENST00000270061 TMEM27Q9HBJ8 222 aa22.4■■□□□ 1.18
SSBP4-201ENST00000270061 KLHL1Q9NR64 748 aa22.4■■□□□ 1.18
SSBP4-201ENST00000270061 ZNF223Q9UK11 482 aaPredicted RBP22.4■■□□□ 1.18
SSBP4-201ENST00000270061 SLC7A7Q9UM01 511 aa22.4■■□□□ 1.18
SSBP4-201ENST00000270061 SLC1A7O00341 560 aa22.4■■□□□ 1.18
SSBP4-201ENST00000270061 ANGPTL1O95841 491 aa22.4■■□□□ 1.18
SSBP4-201ENST00000270061 CYB561P49447 251 aa22.4■■□□□ 1.18
SSBP4-201ENST00000270061 RNF113BQ8IZP6 322 aaKnown RBP22.4■■□□□ 1.18
SSBP4-201ENST00000270061 LSMEM1Q8N8F7 131 aa22.4■■□□□ 1.18
SSBP4-201ENST00000270061 CNIH3Q8TBE1 160 aa22.4■■□□□ 1.18
SSBP4-201ENST00000270061 PIGXQ8TBF5 258 aa22.4■■□□□ 1.18
SSBP4-201ENST00000270061 TP53INP1Q96A56 240 aa22.4■■□□□ 1.18
SSBP4-201ENST00000270061 C5orf34Q96MH7 638 aa22.4■■□□□ 1.18
SSBP4-201ENST00000270061 GAL3ST4Q96RP7 486 aa22.4■■□□□ 1.18
SSBP4-201ENST00000270061 TRIM2Q9C040 744 aa22.4■■□□□ 1.18
SSBP4-201ENST00000270061 NDUFA13Q9P0J0 144 aa22.4■■□□□ 1.18
SSBP4-201ENST00000270061 NEURL1O76050 574 aa22.39■■□□□ 1.17
SSBP4-201ENST00000270061 ZFAND5O76080 213 aa22.39■■□□□ 1.17
SSBP4-201ENST00000270061 CRYABP02511 175 aaKnown RBP22.39■■□□□ 1.17
SSBP4-201ENST00000270061 TP53P04637 393 aaPredicted RBP22.39■■□□□ 1.17
SSBP4-201ENST00000270061 TBXA2RP21731 343 aa22.39■■□□□ 1.17
SSBP4-201ENST00000270061 OMPP47874 163 aa22.39■■□□□ 1.17
SSBP4-201ENST00000270061 GSSP48637 474 aa22.39■■□□□ 1.17
SSBP4-201ENST00000270061 CSNK2BP67870 215 aa22.39■■□□□ 1.17
SSBP4-201ENST00000270061 ZNF468Q5VIY5 522 aaPredicted RBP22.39■■□□□ 1.17
SSBP4-201ENST00000270061 ZNF324BQ6AW86 544 aaPredicted RBP22.39■■□□□ 1.17
SSBP4-201ENST00000270061 ZNF440Q8IYI8 595 aa22.39■■□□□ 1.17
SSBP4-201ENST00000270061 TMEM178AQ8NBL3 297 aa22.39■■□□□ 1.17
SSBP4-201ENST00000270061 RHOXF1Q8NHV9 184 aa22.39■■□□□ 1.17
SSBP4-201ENST00000270061 RNF6Q9Y252 685 aa22.39■■□□□ 1.17
SSBP4-201ENST00000270061 PRKNO60260 465 aaPredicted RBP22.38■■□□□ 1.17
SSBP4-201ENST00000270061 TSPAN2O60636 221 aa22.38■■□□□ 1.17
SSBP4-201ENST00000270061 ALDH3B2P48448 385 aa22.38■■□□□ 1.17
SSBP4-201ENST00000270061 NR0B1P51843 470 aaKnown RBP22.38■■□□□ 1.17
SSBP4-201ENST00000270061 LSM11P83369 360 aaKnown RBP eCLIP22.38■■□□□ 1.171e-8■■■□□ 16.2
SSBP4-201ENST00000270061 TSPAN31Q12999 210 aa22.38■■□□□ 1.17
SSBP4-201ENST00000270061 FNDC7Q5VTL7 733 aa22.38■■□□□ 1.17
SSBP4-201ENST00000270061 ZNF773Q6PK81 442 aa22.38■■□□□ 1.17
SSBP4-201ENST00000270061 SLC34A3Q8N130 599 aa22.38■■□□□ 1.17
SSBP4-201ENST00000270061 FAM71CQ8NEG0 241 aa22.38■■□□□ 1.17
SSBP4-201ENST00000270061 FAM81AQ8TBF8 368 aa22.38■■□□□ 1.17
SSBP4-201ENST00000270061 SCMH1Q96GD3 660 aa22.38■■□□□ 1.17
SSBP4-201ENST00000270061 GPA33Q99795 319 aa22.38■■□□□ 1.17
SSBP4-201ENST00000270061 HES7Q9BYE0 225 aa22.38■■□□□ 1.17
SSBP4-201ENST00000270061 UTS2O95399 124 aa22.38■■□□□ 1.17
SSBP4-201ENST00000270061 CSTAP01040 98 aa22.38■■□□□ 1.17
SSBP4-201ENST00000270061 RNF144AP50876 292 aaPredicted RBP22.38■■□□□ 1.17
SSBP4-201ENST00000270061 RNF4P78317 190 aa22.38■■□□□ 1.17
SSBP4-201ENST00000270061 UBE2FQ969M7 185 aa22.38■■□□□ 1.17
SSBP4-201ENST00000270061 A0A0B4J2E0 115 aa22.37■■□□□ 1.17
SSBP4-201ENST00000270061 SMIM31A0A1B0GVY4 71 aa22.37■■□□□ 1.17
SSBP4-201ENST00000270061 A0A1B0GX12 115 aa22.37■■□□□ 1.17
SSBP4-201ENST00000270061 ABCB7O75027 752 aa22.37■■□□□ 1.17
SSBP4-201ENST00000270061 WBP4O75554 376 aaKnown RBP22.37■■□□□ 1.17
SSBP4-201ENST00000270061 ITGA10O75578 1167 aa22.37■■□□□ 1.17
SSBP4-201ENST00000270061 SLC25A12O75746 678 aa22.37■■□□□ 1.17
SSBP4-201ENST00000270061 NGFRP08138 427 aa22.37■■□□□ 1.17
SSBP4-201ENST00000270061 GABRB1P18505 474 aa22.37■■□□□ 1.17
SSBP4-201ENST00000270061 PNLIPRP2P54317 469 aa22.37■■□□□ 1.17
SSBP4-201ENST00000270061 CDC42P60953 191 aa22.37■■□□□ 1.17
SSBP4-201ENST00000270061 PMP22Q01453 160 aa22.37■■□□□ 1.17
SSBP4-201ENST00000270061 SLX4IPQ5VYV7 408 aa22.37■■□□□ 1.17
SSBP4-201ENST00000270061 HSDL2Q6YN16 418 aa22.37■■□□□ 1.17
SSBP4-201ENST00000270061 OR8K3Q8NH51 312 aa22.37■■□□□ 1.17
SSBP4-201ENST00000270061 NUBPLQ8TB37 319 aa22.37■■□□□ 1.17
SSBP4-201ENST00000270061 TMEM255BQ8WV15 326 aa22.37■■□□□ 1.17
SSBP4-201ENST00000270061 APH1BQ8WW43 257 aa22.37■■□□□ 1.17
SSBP4-201ENST00000270061 KRCC1Q9NPI7 259 aaPredicted RBP22.37■■□□□ 1.17
SSBP4-201ENST00000270061 SCDO00767 359 aa22.36■■□□□ 1.17
SSBP4-201ENST00000270061 KLF4O43474 513 aa22.36■■□□□ 1.17
SSBP4-201ENST00000270061 MPZL2O60487 215 aa22.36■■□□□ 1.17
SSBP4-201ENST00000270061 ADAM11O75078 769 aa22.36■■□□□ 1.17
SSBP4-201ENST00000270061 SP1P08047 785 aa22.36■■□□□ 1.17
SSBP4-201ENST00000270061 LINGO3P0C6S8 592 aa22.36■■□□□ 1.17
SSBP4-201ENST00000270061 FPR3P25089 353 aa22.36■■□□□ 1.17
SSBP4-201ENST00000270061 SLC25A25Q6KCM7 469 aa22.36■■□□□ 1.17
SSBP4-201ENST00000270061 GALNTL5Q7Z4T8 443 aa22.36■■□□□ 1.17
SSBP4-201ENST00000270061 SATL1Q86VE3 508 aa22.36■■□□□ 1.17
SSBP4-201ENST00000270061 TMEM156Q8N614 296 aa22.36■■□□□ 1.17
SSBP4-201ENST00000270061 BPIFB6Q8NFQ5 453 aa22.36■■□□□ 1.17
SSBP4-201ENST00000270061 HS6ST2Q96MM7 605 aa22.36■■□□□ 1.17
SSBP4-201ENST00000270061 EXOSC3Q9NQT5 275 aaKnown RBP22.36■■□□□ 1.17
SSBP4-201ENST00000270061 ZNF226Q9NYT6 803 aa22.36■■□□□ 1.17
SSBP4-201ENST00000270061 TPRKBQ9Y3C4 175 aa22.36■■□□□ 1.17
SSBP4-201ENST00000270061 EML6Q6ZMW3 1958 aa22.36■■□□□ 1.17
SSBP4-201ENST00000270061 MYO7BQ6PIF6 2116 aa22.36■■□□□ 1.17
SSBP4-201ENST00000270061 DOPEY1Q5JWR5 2465 aa22.35■■□□□ 1.17
SSBP4-201ENST00000270061 CHP2O43745 196 aa22.35■■□□□ 1.17
SSBP4-201ENST00000270061 REM1O75628 298 aa22.35■■□□□ 1.17
SSBP4-201ENST00000270061 HPGDP15428 266 aa22.35■■□□□ 1.17
SSBP4-201ENST00000270061 EEF1B2P24534 225 aaKnown RBP22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms