RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 ABRACLQ9P1F3 81 aa25.38■■□□□ 1.65
CBX4-201ENST00000269397 SCML1Q9UN30 329 aa25.38■■□□□ 1.65
CBX4-201ENST00000269397 MED31Q9Y3C7 131 aa25.38■■□□□ 1.65
CBX4-201ENST00000269397 C1QTNF3-AMACRE9PGA6 284 aa25.37■■□□□ 1.65
CBX4-201ENST00000269397 GNB5O14775 395 aa25.37■■□□□ 1.65
CBX4-201ENST00000269397 RRASP10301 218 aa25.37■■□□□ 1.65
CBX4-201ENST00000269397 UGT2B7P16662 529 aa25.37■■□□□ 1.65
CBX4-201ENST00000269397 MRPL43Q8N983 215 aaKnown RBP25.37■■□□□ 1.65
CBX4-201ENST00000269397 MFSD9Q8NBP5 474 aa25.37■■□□□ 1.65
CBX4-201ENST00000269397 WDR89Q96FK6 387 aaPredicted RBP25.37■■□□□ 1.65
CBX4-201ENST00000269397 SPTBP11277 2137 aa25.37■■□□□ 1.65
CBX4-201ENST00000269397 PSMD9O00233 223 aa25.37■■□□□ 1.65
CBX4-201ENST00000269397 ALDOBP05062 364 aa25.37■■□□□ 1.65
CBX4-201ENST00000269397 OR52E2Q8NGJ4 325 aa25.37■■□□□ 1.65
CBX4-201ENST00000269397 OR4K13Q8NH42 304 aa25.37■■□□□ 1.65
CBX4-201ENST00000269397 TEX101Q9BY14 249 aa25.37■■□□□ 1.65
CBX4-201ENST00000269397 KLK11Q9UBX7 282 aa25.37■■□□□ 1.65
CBX4-201ENST00000269397 MAB21L2Q9Y586 359 aa25.37■■□□□ 1.65
CBX4-201ENST00000269397 A0A1W2PPL8 197 aa25.36■■□□□ 1.65
CBX4-201ENST00000269397 RGS11O94810 467 aa25.36■■□□□ 1.65
CBX4-201ENST00000269397 NOGQ13253 232 aa25.36■■□□□ 1.65
CBX4-201ENST00000269397 AMZ1Q400G9 498 aa25.36■■□□□ 1.65
CBX4-201ENST00000269397 TCTE1Q5JU00 501 aa25.36■■□□□ 1.65
CBX4-201ENST00000269397 DCST2Q5T1A1 773 aa25.36■■□□□ 1.65
CBX4-201ENST00000269397 OR2L13Q8N349 312 aa25.36■■□□□ 1.65
CBX4-201ENST00000269397 HDDC3Q8N4P3 179 aa25.36■■□□□ 1.65
CBX4-201ENST00000269397 OR52I2Q8NH67 350 aa25.36■■□□□ 1.65
CBX4-201ENST00000269397 PTCHD1Q96NR3 888 aa25.36■■□□□ 1.65
CBX4-201ENST00000269397 HRASLSQ9HDD0 168 aa25.36■■□□□ 1.65
CBX4-201ENST00000269397 GNG8Q9UK08 70 aa25.36■■□□□ 1.65
CBX4-201ENST00000269397 TRAV1-2A0A0B4J238 106 aa25.36■■□□□ 1.65
CBX4-201ENST00000269397 CCR9P51686 369 aa25.36■■□□□ 1.65
CBX4-201ENST00000269397 RPS11P62280 158 aaKnown RBP eCLIP25.36■■□□□ 1.65
CBX4-201ENST00000269397 FGL2Q14314 439 aa25.36■■□□□ 1.65
CBX4-201ENST00000269397 GAB4Q2WGN9 574 aa25.36■■□□□ 1.65
CBX4-201ENST00000269397 SLC25A25Q6KCM7 469 aa25.36■■□□□ 1.65
CBX4-201ENST00000269397 RNF113BQ8IZP6 322 aaKnown RBP25.36■■□□□ 1.65
CBX4-201ENST00000269397 ZNF619Q8N2I2 560 aa25.36■■□□□ 1.65
CBX4-201ENST00000269397 ZNF433Q8N7K0 673 aaPredicted RBP25.36■■□□□ 1.65
CBX4-201ENST00000269397 OR4K14Q8NGD5 310 aa25.36■■□□□ 1.65
CBX4-201ENST00000269397 IL21RQ9HBE5 538 aa25.36■■□□□ 1.65
CBX4-201ENST00000269397 RNF215Q9Y6U7 377 aa25.36■■□□□ 1.65
CBX4-201ENST00000269397 TRBV2A0A0J9YWF9 115 aa25.35■■□□□ 1.65
CBX4-201ENST00000269397 ARPC1BO15143 372 aaKnown RBP25.35■■□□□ 1.65
CBX4-201ENST00000269397 STX11O75558 287 aa25.35■■□□□ 1.65
CBX4-201ENST00000269397 RPE65Q16518 533 aa25.35■■□□□ 1.65
CBX4-201ENST00000269397 TMPRSS11FQ6ZWK6 438 aa25.35■■□□□ 1.65
CBX4-201ENST00000269397 SMIM19Q96E16 107 aa25.35■■□□□ 1.65
CBX4-201ENST00000269397 GSX2Q9BZM3 304 aa25.35■■□□□ 1.65
CBX4-201ENST00000269397 ZNF350Q9GZX5 532 aa25.35■■□□□ 1.65
CBX4-201ENST00000269397 LDB3O75112 727 aa25.35■■□□□ 1.65
CBX4-201ENST00000269397 NID1P14543 1247 aa25.35■■□□□ 1.65
CBX4-201ENST00000269397 RAD52P43351 418 aa25.35■■□□□ 1.65
CBX4-201ENST00000269397 IKZF1Q13422 519 aa25.35■■□□□ 1.65
CBX4-201ENST00000269397 CDK5R1Q15078 307 aa25.35■■□□□ 1.65
CBX4-201ENST00000269397 UBE2Q1Q7Z7E8 422 aa25.35■■□□□ 1.65
CBX4-201ENST00000269397 TEX19Q8NA77 164 aa25.35■■□□□ 1.65
CBX4-201ENST00000269397 ERMAPQ96PL5 475 aaPredicted RBP25.35■■□□□ 1.65
CBX4-201ENST00000269397 HDAC8Q9BY41 377 aa25.35■■□□□ 1.65
CBX4-201ENST00000269397 CA10Q9NS85 328 aa25.35■■□□□ 1.65
CBX4-201ENST00000269397 LYARQ9NX58 379 aaKnown RBP25.35■■□□□ 1.65
CBX4-201ENST00000269397 HCN3Q9P1Z3 774 aa25.35■■□□□ 1.65
CBX4-201ENST00000269397 PCDHGA9Q9Y5G4 932 aaKnown RBP25.35■■□□□ 1.65
CBX4-201ENST00000269397 TBC1D3EA0A087X179 549 aa25.34■■□□□ 1.65
CBX4-201ENST00000269397 IDSB3KWA1 339 aa25.34■■□□□ 1.65
CBX4-201ENST00000269397 IMPA2O14732 288 aa25.34■■□□□ 1.65
CBX4-201ENST00000269397 CMPK1P30085 196 aa25.34■■□□□ 1.65
CBX4-201ENST00000269397 PTGS2P35354 604 aa25.34■■□□□ 1.65
CBX4-201ENST00000269397 RAG2P55895 527 aa25.34■■□□□ 1.65
CBX4-201ENST00000269397 PLAURQ03405 335 aa25.34■■□□□ 1.65
CBX4-201ENST00000269397 ZC3H14Q6PJT7 736 aaKnown RBP25.34■■□□□ 1.65
CBX4-201ENST00000269397 ZAR1Q86SH2 424 aa25.34■■□□□ 1.65
CBX4-201ENST00000269397 CMIPQ8IY22 773 aa25.34■■□□□ 1.65
CBX4-201ENST00000269397 ACTR6Q9GZN1 396 aa25.34■■□□□ 1.65
CBX4-201ENST00000269397 POT1Q9NUX5 634 aa25.34■■□□□ 1.65
CBX4-201ENST00000269397 LRRC72A6NJI9 287 aa25.34■■□□□ 1.65
CBX4-201ENST00000269397 ACOD1A6NK06 481 aa25.34■■□□□ 1.65
CBX4-201ENST00000269397 GATBO75879 557 aaKnown RBP25.34■■□□□ 1.65
CBX4-201ENST00000269397 DYRK1AQ13627 763 aa25.34■■□□□ 1.65
CBX4-201ENST00000269397 STPG1Q5TH74 334 aa25.34■■□□□ 1.65
CBX4-201ENST00000269397 COX18Q8N8Q8 333 aa25.34■■□□□ 1.65
CBX4-201ENST00000269397 FAM98AQ8NCA5 519 aaKnown RBP25.34■■□□□ 1.65
CBX4-201ENST00000269397 NOX4Q9NPH5 578 aa25.34■■□□□ 1.65
CBX4-201ENST00000269397 PTP4A3O75365 173 aa25.33■■□□□ 1.65
CBX4-201ENST00000269397 ARL6IP5O75915 188 aa25.33■■□□□ 1.65
CBX4-201ENST00000269397 AGR2O95994 175 aa25.33■■□□□ 1.65
CBX4-201ENST00000269397 THBS1P07996 1170 aa25.33■■□□□ 1.65
CBX4-201ENST00000269397 EDNRAP25101 427 aa25.33■■□□□ 1.65
CBX4-201ENST00000269397 SIRPAP78324 504 aa25.33■■□□□ 1.65
CBX4-201ENST00000269397 TNFRSF17Q02223 184 aa25.33■■□□□ 1.65
CBX4-201ENST00000269397 EXOSC7Q15024 291 aaKnown RBP25.33■■□□□ 1.65
CBX4-201ENST00000269397 SNX33Q8WV41 574 aa25.33■■□□□ 1.65
CBX4-201ENST00000269397 ZNRF4Q8WWF5 429 aa25.33■■□□□ 1.65
CBX4-201ENST00000269397 RBPMSQ93062 196 aaKnown RBP25.33■■□□□ 1.65
CBX4-201ENST00000269397 ZNF559Q9BR84 538 aa25.33■■□□□ 1.65
CBX4-201ENST00000269397 RNF208Q9H0X6 261 aa25.33■■□□□ 1.65
CBX4-201ENST00000269397 MGAT4CQ9UBM8 478 aa25.33■■□□□ 1.65
CBX4-201ENST00000269397 NPTNQ9Y639 398 aa25.33■■□□□ 1.65
CBX4-201ENST00000269397 TRBV23OR9-2A0A075B6M9 112 aa25.33■■□□□ 1.65
CBX4-201ENST00000269397 A0A087WV48 116 aa25.33■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms