RNA–Protein interactions for RNA: ENST00000269138.9

SS18-202, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-202ENST00000269138 C3orf33Q6P1S2 294 aa11.45□□□□□ -0.58
SS18-202ENST00000269138 ESPNLQ6ZVH7 1005 aa11.45□□□□□ -0.58
SS18-202ENST00000269138 CBLL1Q75N03 491 aa11.45□□□□□ -0.58
SS18-202ENST00000269138 CHMP1BQ7LBR1 199 aa11.45□□□□□ -0.58
SS18-202ENST00000269138 ATG4DQ86TL0 474 aaPredicted RBP11.45□□□□□ -0.58
SS18-202ENST00000269138 FAM26EQ8N5C1 309 aa11.45□□□□□ -0.58
SS18-202ENST00000269138 LSMEM1Q8N8F7 131 aa11.45□□□□□ -0.58
SS18-202ENST00000269138 C9orf106Q8NAJ2 232 aa11.45□□□□□ -0.58
SS18-202ENST00000269138 OSTF1Q92882 214 aa11.45□□□□□ -0.58
SS18-202ENST00000269138 ARL5BQ96KC2 179 aa11.45□□□□□ -0.58
SS18-202ENST00000269138 OR5B2Q96R09 309 aa11.45□□□□□ -0.58
SS18-202ENST00000269138 THTPAQ9BU02 230 aa11.45□□□□□ -0.58
SS18-202ENST00000269138 SRXN1Q9BYN0 137 aa11.45□□□□□ -0.58
SS18-202ENST00000269138 TRIM2Q9C040 744 aa11.45□□□□□ -0.58
SS18-202ENST00000269138 CALHM2Q9HA72 323 aa11.45□□□□□ -0.58
SS18-202ENST00000269138 ADPRHL2Q9NX46 363 aa11.45□□□□□ -0.58
SS18-202ENST00000269138 TESQ9UGI8 421 aaKnown RBP11.45□□□□□ -0.58
SS18-202ENST00000269138 KIAA1549Q9HCM3 1950 aa11.45□□□□□ -0.58
SS18-202ENST00000269138 CD8B2A6NJW9 211 aa11.45□□□□□ -0.58
SS18-202ENST00000269138 CPSF4LA6NMK7 179 aaKnown RBP11.45□□□□□ -0.58
SS18-202ENST00000269138 ARPC2O15144 300 aa11.45□□□□□ -0.58
SS18-202ENST00000269138 GYG2O15488 501 aa11.45□□□□□ -0.58
SS18-202ENST00000269138 KLK2P20151 261 aa11.45□□□□□ -0.58
SS18-202ENST00000269138 CXCR1P25024 350 aa11.45□□□□□ -0.58
SS18-202ENST00000269138 SLC7A1P30825 629 aa11.45□□□□□ -0.58
SS18-202ENST00000269138 CARD18P57730 90 aa11.45□□□□□ -0.58
SS18-202ENST00000269138 RPS3AP61247 264 aaKnown RBP11.45□□□□□ -0.58
SS18-202ENST00000269138 NCALDP61601 193 aa11.45□□□□□ -0.58
SS18-202ENST00000269138 SGCBQ16585 318 aa11.45□□□□□ -0.58
SS18-202ENST00000269138 SPATS1Q496A3 300 aa11.45□□□□□ -0.58
SS18-202ENST00000269138 SYT14P1Q58G82 188 aa11.45□□□□□ -0.58
SS18-202ENST00000269138 ENTPD8Q5MY95 495 aa11.45□□□□□ -0.58
SS18-202ENST00000269138 TMEM211Q6ICI0 200 aa11.45□□□□□ -0.58
SS18-202ENST00000269138 RANBP3LQ86VV4 465 aaPredicted RBP11.45□□□□□ -0.58
SS18-202ENST00000269138 CCDC71Q8IV32 467 aaPredicted RBP11.45□□□□□ -0.58
SS18-202ENST00000269138 EID3Q8N140 333 aa11.45□□□□□ -0.58
SS18-202ENST00000269138 FAM86B1Q8N7N1 296 aa11.45□□□□□ -0.58
SS18-202ENST00000269138 FNDC9Q8TBE3 224 aa11.45□□□□□ -0.58
SS18-202ENST00000269138 PHF10Q8WUB8 498 aaKnown RBP11.45□□□□□ -0.58
SS18-202ENST00000269138 UCN2Q96RP3 112 aa11.45□□□□□ -0.58
SS18-202ENST00000269138 EVA1AQ9H8M9 152 aa11.45□□□□□ -0.58
SS18-202ENST00000269138 TMEM27Q9HBJ8 222 aa11.45□□□□□ -0.58
SS18-202ENST00000269138 DCAF13Q9NV06 445 aaKnown RBP11.45□□□□□ -0.58
SS18-202ENST00000269138 RPS6KB2Q9UBS0 482 aa11.45□□□□□ -0.58
SS18-202ENST00000269138 PRDM4Q9UKN5 801 aa11.45□□□□□ -0.58
SS18-202ENST00000269138 PRPF19Q9UMS4 504 aaKnown RBP11.45□□□□□ -0.58
SS18-202ENST00000269138 SLC9A8Q9Y2E8 581 aa11.45□□□□□ -0.58
SS18-202ENST00000269138 SNX13Q9Y5W8 968 aa11.45□□□□□ -0.58
SS18-202ENST00000269138 USP9XQ93008 2570 aaPredicted RBP11.44□□□□□ -0.58
SS18-202ENST00000269138 A0A0B4J2E0 115 aa11.44□□□□□ -0.58
SS18-202ENST00000269138 A0A0G2JNJ9 132 aa11.44□□□□□ -0.58
SS18-202ENST00000269138 A0A1B0GX12 115 aa11.44□□□□□ -0.58
SS18-202ENST00000269138 WIPF3A6NGB9 483 aa11.44□□□□□ -0.58
SS18-202ENST00000269138 GJE1A6NN92 205 aa11.44□□□□□ -0.58
SS18-202ENST00000269138 FMO6PO60774 539 aa11.44□□□□□ -0.58
SS18-202ENST00000269138 GMNNO75496 209 aa11.44□□□□□ -0.58
SS18-202ENST00000269138 AQP8O94778 261 aa11.44□□□□□ -0.58
SS18-202ENST00000269138 LYPD3O95274 346 aa11.44□□□□□ -0.58
SS18-202ENST00000269138 THY1P04216 161 aa11.44□□□□□ -0.58
SS18-202ENST00000269138 PTNP21246 168 aa11.44□□□□□ -0.58
SS18-202ENST00000269138 CDH12P55289 794 aa11.44□□□□□ -0.58
SS18-202ENST00000269138 MS4A2Q01362 244 aa11.44□□□□□ -0.58
SS18-202ENST00000269138 PON3Q15166 354 aa11.44□□□□□ -0.58
SS18-202ENST00000269138 SF3B4Q15427 424 aaKnown RBP eCLIP11.44□□□□□ -0.584e-8■■■□□ 18.5
SS18-202ENST00000269138 CDSNQ15517 529 aa11.44□□□□□ -0.58
SS18-202ENST00000269138 PPP4R4Q6NUP7 873 aa11.44□□□□□ -0.58
SS18-202ENST00000269138 DEF8Q6ZN54 512 aa11.44□□□□□ -0.58
SS18-202ENST00000269138 P3H2Q8IVL5 708 aa11.44□□□□□ -0.58
SS18-202ENST00000269138 ARHGAP24Q8N264 748 aa11.44□□□□□ -0.58
SS18-202ENST00000269138 NAXEQ8NCW5 288 aa11.44□□□□□ -0.58
SS18-202ENST00000269138 RNF217Q8TC41 542 aa11.44□□□□□ -0.58
SS18-202ENST00000269138 SLC25A43Q8WUT9 341 aaPredicted RBP11.44□□□□□ -0.58
SS18-202ENST00000269138 ITLN2Q8WWU7 325 aaPredicted RBP11.44□□□□□ -0.58
SS18-202ENST00000269138 ROBO4Q8WZ75 1007 aa11.44□□□□□ -0.58
SS18-202ENST00000269138 LZICQ8WZA0 190 aa11.44□□□□□ -0.58
SS18-202ENST00000269138 RND1Q92730 232 aa11.44□□□□□ -0.58
SS18-202ENST00000269138 WNT2BQ93097 391 aa11.44□□□□□ -0.58
SS18-202ENST00000269138 HSH2DQ96JZ2 352 aa11.44□□□□□ -0.58
SS18-202ENST00000269138 BTBD10Q9BSF8 475 aa11.44□□□□□ -0.58
SS18-202ENST00000269138 GORASP2Q9H8Y8 452 aa11.44□□□□□ -0.58
SS18-202ENST00000269138 Q9UFV3 132 aa11.44□□□□□ -0.58
SS18-202ENST00000269138 MAGEL2Q9UJ55 1249 aa11.44□□□□□ -0.58
SS18-202ENST00000269138 RNF6Q9Y252 685 aa11.44□□□□□ -0.58
SS18-202ENST00000269138 V9GYQ6 96 aa11.44□□□□□ -0.58
SS18-202ENST00000269138 DIDO1Q9BTC0 2240 aaKnown RBP11.43□□□□□ -0.58
SS18-202ENST00000269138 IGKV1D-42A0A075B6H8 117 aa11.43□□□□□ -0.58
SS18-202ENST00000269138 MBD3L4A6NDZ8 208 aaPredicted RBP11.43□□□□□ -0.58
SS18-202ENST00000269138 MBD3L3A6NE82 208 aaPredicted RBP11.43□□□□□ -0.58
SS18-202ENST00000269138 MBD3L5A6NJ08 208 aaPredicted RBP11.43□□□□□ -0.58
SS18-202ENST00000269138 SLC22A20A6NK97 555 aa11.43□□□□□ -0.58
SS18-202ENST00000269138 ELOA3DA6NLF2 546 aaPredicted RBP11.43□□□□□ -0.58
SS18-202ENST00000269138 ZNF208O43345 1280 aa11.43□□□□□ -0.58
SS18-202ENST00000269138 PRKD3O94806 890 aa11.43□□□□□ -0.58
SS18-202ENST00000269138 ATP6V1B2P21281 511 aa11.43□□□□□ -0.58
SS18-202ENST00000269138 CEACAM8P31997 349 aaPredicted RBP11.43□□□□□ -0.58
SS18-202ENST00000269138 TIMP3P35625 211 aa11.43□□□□□ -0.58
SS18-202ENST00000269138 YAP1P46937 504 aaKnown RBP11.43□□□□□ -0.58
SS18-202ENST00000269138 DIO1P49895 249 aa11.43□□□□□ -0.58
SS18-202ENST00000269138 PER3P56645 1201 aa11.43□□□□□ -0.58
SS18-202ENST00000269138 MYBPHQ13203 477 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms