RNA–Protein interactions for RNA: ENST00000267935.12

COMMD4-201, Transcript of COMM domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COMMD4, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-201ENST00000267935 SKP2Q13309 424 aa12.52□□□□□ -0.41
COMMD4-201ENST00000267935 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.52□□□□□ -0.41
COMMD4-201ENST00000267935 OR5D16Q8NGK9 328 aa12.52□□□□□ -0.41
COMMD4-201ENST00000267935 OR5AK3PQ8NH89 298 aa12.52□□□□□ -0.41
COMMD4-201ENST00000267935 AGR3Q8TD06 166 aa12.52□□□□□ -0.41
COMMD4-201ENST00000267935 SLC35G5Q96KT7 338 aa12.52□□□□□ -0.41
COMMD4-201ENST00000267935 MUS81Q96NY9 551 aa12.52□□□□□ -0.41
COMMD4-201ENST00000267935 NAA11Q9BSU3 229 aaPredicted RBP12.52□□□□□ -0.41
COMMD4-201ENST00000267935 INPP5KQ9BT40 448 aa12.52□□□□□ -0.41
COMMD4-201ENST00000267935 C1orf50Q9BV19 199 aa12.52□□□□□ -0.41
COMMD4-201ENST00000267935 POLE3Q9NRF9 147 aa12.52□□□□□ -0.41
COMMD4-201ENST00000267935 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.52□□□□□ -0.41
COMMD4-201ENST00000267935 NPAP1Q9NZP6 1156 aa12.52□□□□□ -0.41
COMMD4-201ENST00000267935 CHRNA9Q9UGM1 479 aa12.52□□□□□ -0.41
COMMD4-201ENST00000267935 MKLN1Q9UL63 735 aa12.52□□□□□ -0.41
COMMD4-201ENST00000267935 TRAPPC4Q9Y296 219 aa12.52□□□□□ -0.41
COMMD4-201ENST00000267935 SLC25A15Q9Y619 301 aa12.52□□□□□ -0.41
COMMD4-201ENST00000267935 CR1P17927 2039 aa12.52□□□□□ -0.41
COMMD4-201ENST00000267935 HEATR1Q9H583 2144 aaKnown RBP12.52□□□□□ -0.41
COMMD4-201ENST00000267935 TMEM233B4DJY2 109 aa12.51□□□□□ -0.41
COMMD4-201ENST00000267935 PHF1O43189 567 aaPredicted RBP12.51□□□□□ -0.41
COMMD4-201ENST00000267935 FCMRO60667 390 aa12.51□□□□□ -0.41
COMMD4-201ENST00000267935 EIF1BO60739 113 aaKnown RBP12.51□□□□□ -0.41
COMMD4-201ENST00000267935 GUSBP08236 651 aa12.51□□□□□ -0.41
COMMD4-201ENST00000267935 USF1P22415 310 aaPredicted RBP12.51□□□□□ -0.41
COMMD4-201ENST00000267935 APOBEC3AP31941 199 aaPredicted RBP12.51□□□□□ -0.41
COMMD4-201ENST00000267935 THBS2P35442 1172 aa12.51□□□□□ -0.41
COMMD4-201ENST00000267935 EFNA4P52798 201 aa12.51□□□□□ -0.41
COMMD4-201ENST00000267935 CASP9P55211 416 aa12.51□□□□□ -0.41
COMMD4-201ENST00000267935 CLDN8P56748 225 aa12.51□□□□□ -0.41
COMMD4-201ENST00000267935 OR2B6P58173 313 aa12.51□□□□□ -0.41
COMMD4-201ENST00000267935 XKR7Q5GH72 579 aa12.51□□□□□ -0.41
COMMD4-201ENST00000267935 GRINAQ7Z429 371 aa12.51□□□□□ -0.41
COMMD4-201ENST00000267935 KRTCAP2Q8N6L1 136 aa12.51□□□□□ -0.41
COMMD4-201ENST00000267935 XAGE5Q8WWM1 108 aa12.51□□□□□ -0.41
COMMD4-201ENST00000267935 AMDHD2Q9Y303 409 aa12.51□□□□□ -0.41
COMMD4-201ENST00000267935 WDR45Q9Y484 360 aa12.51□□□□□ -0.41
COMMD4-201ENST00000267935 H7C417 338 aa12.5□□□□□ -0.41
COMMD4-201ENST00000267935 UGT2B17O75795 530 aa12.5□□□□□ -0.41
COMMD4-201ENST00000267935 WNT11O96014 354 aa12.5□□□□□ -0.41
COMMD4-201ENST00000267935 F12P00748 615 aaPredicted RBP12.5□□□□□ -0.41
COMMD4-201ENST00000267935 PAX7P23759 505 aa12.5□□□□□ -0.41
COMMD4-201ENST00000267935 RYKP34925 604 aa12.5□□□□□ -0.41
COMMD4-201ENST00000267935 GZMKP49863 264 aa12.5□□□□□ -0.41
COMMD4-201ENST00000267935 MAP2K6P52564 334 aa12.5□□□□□ -0.41
COMMD4-201ENST00000267935 SLC16A1P53985 500 aa12.5□□□□□ -0.41
COMMD4-201ENST00000267935 PRPS1P60891 318 aa12.5□□□□□ -0.41
COMMD4-201ENST00000267935 SLC35A1P78382 337 aa12.5□□□□□ -0.41
COMMD4-201ENST00000267935 LSM11P83369 360 aaKnown RBP eCLIP12.5□□□□□ -0.41
COMMD4-201ENST00000267935 HPCAP84074 193 aa12.5□□□□□ -0.41
COMMD4-201ENST00000267935 EMX2Q04743 252 aa12.5□□□□□ -0.41
COMMD4-201ENST00000267935 GABRA6Q16445 453 aa12.5□□□□□ -0.41
COMMD4-201ENST00000267935 SMU1Q2TAY7 513 aa12.5□□□□□ -0.41
COMMD4-201ENST00000267935 ANXA8L1Q5VT79 327 aa12.5□□□□□ -0.41
COMMD4-201ENST00000267935 ABLIM2Q6H8Q1 611 aa12.5□□□□□ -0.41
COMMD4-201ENST00000267935 C11orf71Q6IPW1 123 aa12.5□□□□□ -0.41
COMMD4-201ENST00000267935 KLHL24Q6TFL4 600 aa12.5□□□□□ -0.41
COMMD4-201ENST00000267935 RIMKLAQ8IXN7 391 aa12.5□□□□□ -0.41
COMMD4-201ENST00000267935 C17orf78Q8N4C9 275 aa12.5□□□□□ -0.41
COMMD4-201ENST00000267935 ARFGAP2Q8N6H7 521 aa12.5□□□□□ -0.41
COMMD4-201ENST00000267935 C1orf162Q8NEQ5 155 aaPredicted RBP12.5□□□□□ -0.41
COMMD4-201ENST00000267935 EPS8L3Q8TE67 593 aaKnown RBP12.5□□□□□ -0.41
COMMD4-201ENST00000267935 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.5□□□□□ -0.41
COMMD4-201ENST00000267935 ZNF524Q96C55 264 aa12.5□□□□□ -0.41
COMMD4-201ENST00000267935 DDIT4LQ96D03 193 aa12.5□□□□□ -0.41
COMMD4-201ENST00000267935 APOPT1Q96IL0 206 aa12.5□□□□□ -0.41
COMMD4-201ENST00000267935 CCDC106Q9BWC9 280 aa12.5□□□□□ -0.41
COMMD4-201ENST00000267935 C1QTNF6Q9BXI9 259 aa12.5□□□□□ -0.41
COMMD4-201ENST00000267935 ZNF350Q9GZX5 532 aa12.5□□□□□ -0.41
COMMD4-201ENST00000267935 CTPS2Q9NRF8 586 aa12.5□□□□□ -0.41
COMMD4-201ENST00000267935 MKS1Q9NXB0 559 aa12.5□□□□□ -0.41
COMMD4-201ENST00000267935 NOP53Q9NZM5 478 aaKnown RBP12.5□□□□□ -0.41
COMMD4-201ENST00000267935 TMEM181Q9P2C4 612 aa12.5□□□□□ -0.41
COMMD4-201ENST00000267935 MALT1Q9UDY8 824 aa12.5□□□□□ -0.41
COMMD4-201ENST00000267935 GIMAP2Q9UG22 337 aa12.5□□□□□ -0.41
COMMD4-201ENST00000267935 DCTN4Q9UJW0 460 aa12.5□□□□□ -0.41
COMMD4-201ENST00000267935 RNF103-CHMP3A0A140T963 221 aa12.49□□□□□ -0.41
COMMD4-201ENST00000267935 ZNF716A6NP11 495 aa12.49□□□□□ -0.41
COMMD4-201ENST00000267935 RNASET2O00584 256 aaKnown RBP12.49□□□□□ -0.41
COMMD4-201ENST00000267935 LMX1BO60663 402 aa12.49□□□□□ -0.41
COMMD4-201ENST00000267935 G6PDP11413 515 aa12.49□□□□□ -0.41
COMMD4-201ENST00000267935 UQCRBP14927 111 aa12.49□□□□□ -0.41
COMMD4-201ENST00000267935 UQCRC2P22695 453 aa12.49□□□□□ -0.41
COMMD4-201ENST00000267935 EDNRAP25101 427 aa12.49□□□□□ -0.41
COMMD4-201ENST00000267935 PGM1P36871 562 aa12.49□□□□□ -0.41
COMMD4-201ENST00000267935 RPS26P62854 115 aaKnown RBP12.49□□□□□ -0.41
COMMD4-201ENST00000267935 KCNJ10P78508 379 aa12.49□□□□□ -0.41
COMMD4-201ENST00000267935 GNA13Q14344 377 aa12.49□□□□□ -0.41
COMMD4-201ENST00000267935 CASP12Q6UXS9 341 aa12.49□□□□□ -0.41
COMMD4-201ENST00000267935 ABHD12BQ7Z5M8 362 aaPredicted RBP12.49□□□□□ -0.41
COMMD4-201ENST00000267935 RIBC1Q8N443 379 aaPredicted RBP12.49□□□□□ -0.41
COMMD4-201ENST00000267935 ZNF525Q8N782 197 aa12.49□□□□□ -0.41
COMMD4-201ENST00000267935 OR4A15Q8NGL6 344 aa12.49□□□□□ -0.41
COMMD4-201ENST00000267935 MIPOL1Q8TD10 442 aa12.49□□□□□ -0.41
COMMD4-201ENST00000267935 C3orf30Q96M34 536 aa12.49□□□□□ -0.41
COMMD4-201ENST00000267935 ZIM3Q96PE6 472 aa12.49□□□□□ -0.41
COMMD4-201ENST00000267935 KCNS3Q9BQ31 491 aa12.49□□□□□ -0.41
COMMD4-201ENST00000267935 OR51I1Q9H343 314 aa12.49□□□□□ -0.41
COMMD4-201ENST00000267935 EXOSC3Q9NQT5 275 aaKnown RBP12.49□□□□□ -0.41
COMMD4-201ENST00000267935 SLC9A8Q9Y2E8 581 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms