RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 SLC22A10Q63ZE4 541 aa14.33□□□□□ -0.12
TIMP3-201ENST00000266085 DNAJC22Q8N4W6 341 aa14.33□□□□□ -0.12
TIMP3-201ENST00000266085 HRASLS5Q96KN8 279 aa14.33□□□□□ -0.12
TIMP3-201ENST00000266085 CCNL2Q96S94 520 aaPredicted RBP14.33□□□□□ -0.12
TIMP3-201ENST00000266085 H3BUI4 141 aa14.32□□□□□ -0.12
TIMP3-201ENST00000266085 TMPRSS11DO60235 418 aa14.32□□□□□ -0.12
TIMP3-201ENST00000266085 CREBL2O60519 120 aaPredicted RBP14.32□□□□□ -0.12
TIMP3-201ENST00000266085 PTTG1O95997 202 aa14.32□□□□□ -0.12
TIMP3-201ENST00000266085 CD1CP29017 333 aa14.32□□□□□ -0.12
TIMP3-201ENST00000266085 PRSS3P35030 304 aa14.32□□□□□ -0.12
TIMP3-201ENST00000266085 GAB1Q13480 694 aa14.32□□□□□ -0.12
TIMP3-201ENST00000266085 LRRC37A5PQ49AS3 106 aa14.32□□□□□ -0.12
TIMP3-201ENST00000266085 AWAT2Q6E213 333 aa14.32□□□□□ -0.12
TIMP3-201ENST00000266085 MED25Q71SY5 747 aa14.32□□□□□ -0.12
TIMP3-201ENST00000266085 LAS2Q8IYD9 372 aa14.32□□□□□ -0.12
TIMP3-201ENST00000266085 ZNF683Q8IZ20 524 aa14.32□□□□□ -0.12
TIMP3-201ENST00000266085 LRRC46Q96FV0 321 aa14.32□□□□□ -0.12
TIMP3-201ENST00000266085 MRI1Q9BV20 369 aa14.32□□□□□ -0.12
TIMP3-201ENST00000266085 OR10A4Q9H209 315 aa14.32□□□□□ -0.12
TIMP3-201ENST00000266085 C12orf4Q9NQ89 552 aa14.32□□□□□ -0.12
TIMP3-201ENST00000266085 MED17Q9NVC6 651 aa14.32□□□□□ -0.12
TIMP3-201ENST00000266085 MRPL15Q9P015 296 aaKnown RBP14.32□□□□□ -0.12
TIMP3-201ENST00000266085 NDUFAF4Q9P032 175 aa14.32□□□□□ -0.12
TIMP3-201ENST00000266085 NXT1Q9UKK6 140 aaKnown RBP14.32□□□□□ -0.12
TIMP3-201ENST00000266085 A0A1W2PR48 441 aa14.32□□□□□ -0.12
TIMP3-201ENST00000266085 ARRB2P32121 409 aa14.32□□□□□ -0.12
TIMP3-201ENST00000266085 EPHA5P54756 1037 aa14.32□□□□□ -0.12
TIMP3-201ENST00000266085 EEF1A1P68104 462 aaKnown RBP14.32□□□□□ -0.12
TIMP3-201ENST00000266085 RSU1Q15404 277 aa14.32□□□□□ -0.12
TIMP3-201ENST00000266085 ZNF611Q8N823 705 aa14.32□□□□□ -0.12
TIMP3-201ENST00000266085 ALG14Q96F25 216 aa14.32□□□□□ -0.12
TIMP3-201ENST00000266085 KATNB1Q9BVA0 655 aa14.32□□□□□ -0.12
TIMP3-201ENST00000266085 WDR37Q9Y2I8 494 aa14.32□□□□□ -0.12
TIMP3-201ENST00000266085 hCG_1807616A0A1W2PRN6 198 aa14.32□□□□□ -0.12
TIMP3-201ENST00000266085 ZNF850A8MQ14 1090 aa14.32□□□□□ -0.12
TIMP3-201ENST00000266085 LCMT2O60294 686 aaKnown RBP14.32□□□□□ -0.12
TIMP3-201ENST00000266085 GABRG2P18507 467 aa14.32□□□□□ -0.12
TIMP3-201ENST00000266085 TACR3P29371 465 aa14.32□□□□□ -0.12
TIMP3-201ENST00000266085 KCNAB1Q14722 419 aa14.32□□□□□ -0.12
TIMP3-201ENST00000266085 TMEM244Q5VVB8 128 aa14.32□□□□□ -0.12
TIMP3-201ENST00000266085 CNIH2Q6PI25 160 aa14.32□□□□□ -0.12
TIMP3-201ENST00000266085 TBPL2Q6SJ96 375 aa14.32□□□□□ -0.12
TIMP3-201ENST00000266085 SLC25A44Q96H78 314 aaPredicted RBP14.32□□□□□ -0.12
TIMP3-201ENST00000266085 NRSN2Q9GZP1 204 aa14.32□□□□□ -0.12
TIMP3-201ENST00000266085 SYT4Q9H2B2 425 aa14.32□□□□□ -0.12
TIMP3-201ENST00000266085 CHRDQ9H2X0 955 aa14.32□□□□□ -0.12
TIMP3-201ENST00000266085 LYRM4Q9HD34 91 aa14.32□□□□□ -0.12
TIMP3-201ENST00000266085 HHLA2Q9UM44 414 aa14.32□□□□□ -0.12
TIMP3-201ENST00000266085 DNASE1P24855 282 aa14.32□□□□□ -0.12
TIMP3-201ENST00000266085 AKR1D1P51857 326 aa14.32□□□□□ -0.12
TIMP3-201ENST00000266085 HSD17B7P56937 341 aa14.32□□□□□ -0.12
TIMP3-201ENST00000266085 SFRP4Q6FHJ7 346 aaPredicted RBP14.32□□□□□ -0.12
TIMP3-201ENST00000266085 MBOAT2Q6ZWT7 520 aa14.32□□□□□ -0.12
TIMP3-201ENST00000266085 RCBTB1Q8NDN9 531 aa14.32□□□□□ -0.12
TIMP3-201ENST00000266085 B3GNT3Q9Y2A9 372 aa14.32□□□□□ -0.12
TIMP3-201ENST00000266085 HIF3AQ9Y2N7 669 aa14.32□□□□□ -0.12
TIMP3-201ENST00000266085 A0A1B0GWA3 101 aa14.31□□□□□ -0.12
TIMP3-201ENST00000266085 A0A1B0GX78 115 aa14.31□□□□□ -0.12
TIMP3-201ENST00000266085 SNAPC5O75971 98 aa14.31□□□□□ -0.12
TIMP3-201ENST00000266085 CDK10Q15131 360 aa14.31□□□□□ -0.12
TIMP3-201ENST00000266085 NKAIN1Q4KMZ8 207 aa14.31□□□□□ -0.12
TIMP3-201ENST00000266085 TMEM215Q68D42 235 aa14.31□□□□□ -0.12
TIMP3-201ENST00000266085 TMEM150AQ86TG1 271 aa14.31□□□□□ -0.12
TIMP3-201ENST00000266085 ZNF587Q96SQ5 575 aaPredicted RBP14.31□□□□□ -0.12
TIMP3-201ENST00000266085 ZNF700Q9H0M5 742 aa14.31□□□□□ -0.12
TIMP3-201ENST00000266085 FN3KQ9H479 309 aa14.31□□□□□ -0.12
TIMP3-201ENST00000266085 CEPT1Q9Y6K0 416 aa14.31□□□□□ -0.12
TIMP3-201ENST00000266085 A0A1B0GTL3 188 aa14.31□□□□□ -0.12
TIMP3-201ENST00000266085 CXorf51AA0A1B0GTR3 108 aa14.31□□□□□ -0.12
TIMP3-201ENST00000266085 M0R233 179 aa14.31□□□□□ -0.12
TIMP3-201ENST00000266085 ZNF195O14628 629 aa14.31□□□□□ -0.12
TIMP3-201ENST00000266085 GNRHRP30968 328 aa14.31□□□□□ -0.12
TIMP3-201ENST00000266085 TRMT12Q53H54 448 aaKnown RBP14.31□□□□□ -0.12
TIMP3-201ENST00000266085 NHSL2Q5HYW2 709 aa14.31□□□□□ -0.12
TIMP3-201ENST00000266085 OR2G6Q5TZ20 316 aa14.31□□□□□ -0.12
TIMP3-201ENST00000266085 LIX1LQ8IVB5 337 aa14.31□□□□□ -0.12
TIMP3-201ENST00000266085 PLA2G2FQ9BZM2 168 aa14.31□□□□□ -0.12
TIMP3-201ENST00000266085 LTB4R2Q9NPC1 389 aa14.31□□□□□ -0.12
TIMP3-201ENST00000266085 PRDM9Q9NQV7 894 aa14.31□□□□□ -0.12
TIMP3-201ENST00000266085 OLAHQ9NV23 265 aa14.31□□□□□ -0.12
TIMP3-201ENST00000266085 SLC6A14Q9UN76 642 aa14.31□□□□□ -0.12
TIMP3-201ENST00000266085 RP1P56715 2156 aa14.31□□□□□ -0.12
TIMP3-201ENST00000266085 HRGP04196 525 aa14.31□□□□□ -0.12
TIMP3-201ENST00000266085 PET100P0DJ07 73 aa14.31□□□□□ -0.12
TIMP3-201ENST00000266085 UBALD2Q8IYN6 164 aa14.31□□□□□ -0.12
TIMP3-201ENST00000266085 CCDC74AQ96AQ1 378 aa14.31□□□□□ -0.12
TIMP3-201ENST00000266085 TEX101Q9BY14 249 aa14.31□□□□□ -0.12
TIMP3-201ENST00000266085 CDH20Q9HBT6 801 aa14.31□□□□□ -0.12
TIMP3-201ENST00000266085 SERGEFQ9UGK8 458 aa14.31□□□□□ -0.12
TIMP3-201ENST00000266085 DIRAS3O95661 229 aa14.3□□□□□ -0.12
TIMP3-201ENST00000266085 IGHG1P01857 330 aa14.3□□□□□ -0.12
TIMP3-201ENST00000266085 POU3F2P20265 443 aaPredicted RBP14.3□□□□□ -0.12
TIMP3-201ENST00000266085 ELAVL4P26378 380 aaKnown RBP14.3□□□□□ -0.12
TIMP3-201ENST00000266085 TMEM176BQ3YBM2 270 aaPredicted RBP14.3□□□□□ -0.12
TIMP3-201ENST00000266085 TSSK4Q6SA08 328 aa14.3□□□□□ -0.12
TIMP3-201ENST00000266085 MFSD8Q8NHS3 518 aa14.3□□□□□ -0.12
TIMP3-201ENST00000266085 RADILQ96JH8 1075 aa14.3□□□□□ -0.12
TIMP3-201ENST00000266085 TNFRSF13CQ96RJ3 184 aa14.3□□□□□ -0.12
TIMP3-201ENST00000266085 PRR14Q9BWN1 585 aa14.3□□□□□ -0.12
TIMP3-201ENST00000266085 CPNE5Q9HCH3 593 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms