RNA–Protein interactions for RNA: ENST00000265081.6

MSH3-201, Transcript of mutS homolog 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH3, Length 4,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-201ENST00000265081 LIX1LQ8IVB5 337 aa10.23□□□□□ -0.77
MSH3-201ENST00000265081 ZFP41Q8N8Y5 198 aa10.23□□□□□ -0.77
MSH3-201ENST00000265081 HAVCR2Q8TDQ0 301 aa10.23□□□□□ -0.77
MSH3-201ENST00000265081 SPACA7Q96KW9 195 aa10.23□□□□□ -0.77
MSH3-201ENST00000265081 DGAT2Q96PD7 388 aa10.23□□□□□ -0.77
MSH3-201ENST00000265081 IFT27Q9BW83 186 aa10.23□□□□□ -0.77
MSH3-201ENST00000265081 MOV10Q9HCE1 1003 aaKnown RBP10.23□□□□□ -0.77
MSH3-201ENST00000265081 Q9N2J8 555 aa10.23□□□□□ -0.77
MSH3-201ENST00000265081 RIIAD1A6NNX1 92 aa10.23□□□□□ -0.77
MSH3-201ENST00000265081 E9PI62 339 aa10.23□□□□□ -0.77
MSH3-201ENST00000265081 TO15178 435 aa10.23□□□□□ -0.77
MSH3-201ENST00000265081 NDUFB2O95178 105 aa10.23□□□□□ -0.77
MSH3-201ENST00000265081 TFP02787 698 aa10.23□□□□□ -0.77
MSH3-201ENST00000265081 MST1P26927 711 aa10.23□□□□□ -0.77
MSH3-201ENST00000265081 BTG2P78543 158 aa10.23□□□□□ -0.77
MSH3-201ENST00000265081 CCDC58Q4VC31 144 aa10.23□□□□□ -0.77
MSH3-201ENST00000265081 SSX6Q7RTT6 188 aa10.23□□□□□ -0.77
MSH3-201ENST00000265081 DOK4Q8TEW6 326 aa10.23□□□□□ -0.77
MSH3-201ENST00000265081 SMPDL3BQ92485 455 aa10.23□□□□□ -0.77
MSH3-201ENST00000265081 ST6GAL2Q96JF0 529 aa10.23□□□□□ -0.77
MSH3-201ENST00000265081 TMED9Q9BVK6 235 aa10.23□□□□□ -0.77
MSH3-201ENST00000265081 C11orf54Q9H0W9 315 aaPredicted RBP10.23□□□□□ -0.77
MSH3-201ENST00000265081 HCN3Q9P1Z3 774 aa10.23□□□□□ -0.77
MSH3-201ENST00000265081 FRG2CA6NGY1 282 aa10.23□□□□□ -0.77
MSH3-201ENST00000265081 B4DXG7 233 aa10.23□□□□□ -0.77
MSH3-201ENST00000265081 ADAM10O14672 748 aa10.23□□□□□ -0.77
MSH3-201ENST00000265081 PPP1R3DO95685 299 aa10.23□□□□□ -0.77
MSH3-201ENST00000265081 OR2T7P0C7T2 308 aa10.23□□□□□ -0.77
MSH3-201ENST00000265081 HLA-DMAP28067 261 aa10.23□□□□□ -0.77
MSH3-201ENST00000265081 KCNJ8Q15842 424 aa10.23□□□□□ -0.77
MSH3-201ENST00000265081 CEP78Q5JTW2 689 aa10.23□□□□□ -0.77
MSH3-201ENST00000265081 FAM131AQ6UXB0 335 aa10.23□□□□□ -0.77
MSH3-201ENST00000265081 OR5M3Q8NGP4 307 aa10.23□□□□□ -0.77
MSH3-201ENST00000265081 OR2T27Q8NH04 317 aa10.23□□□□□ -0.77
MSH3-201ENST00000265081 RNF170Q96K19 258 aa10.23□□□□□ -0.77
MSH3-201ENST00000265081 CMTM3Q96MX0 182 aa10.23□□□□□ -0.77
MSH3-201ENST00000265081 NDC1Q9BTX1 674 aa10.23□□□□□ -0.77
MSH3-201ENST00000265081 PHF7Q9BWX1 381 aaPredicted RBP10.23□□□□□ -0.77
MSH3-201ENST00000265081 MIR1-1HGQ9H1L0 117 aa10.23□□□□□ -0.77
MSH3-201ENST00000265081 PRODH2Q9UF12 536 aa10.23□□□□□ -0.77
MSH3-201ENST00000265081 HIF3AQ9Y2N7 669 aa10.23□□□□□ -0.77
MSH3-201ENST00000265081 ZNF337Q9Y3M9 751 aa10.23□□□□□ -0.77
MSH3-201ENST00000265081 IGHV5-51A0A0C4DH38 117 aa10.22□□□□□ -0.77
MSH3-201ENST00000265081 C2orf92A0A1B0GVN3 265 aa10.22□□□□□ -0.77
MSH3-201ENST00000265081 B4DGG1 531 aa10.22□□□□□ -0.77
MSH3-201ENST00000265081 ASAH2BP0C7U1 165 aa10.22□□□□□ -0.77
MSH3-201ENST00000265081 TYRP1P17643 537 aa10.22□□□□□ -0.77
MSH3-201ENST00000265081 EFNA3P52797 238 aa10.22□□□□□ -0.77
MSH3-201ENST00000265081 SLC25A1P53007 311 aa10.22□□□□□ -0.77
MSH3-201ENST00000265081 TPTEP56180 551 aa10.22□□□□□ -0.77
MSH3-201ENST00000265081 NXPH1P58417 271 aa10.22□□□□□ -0.77
MSH3-201ENST00000265081 RACK1P63244 317 aaKnown RBP10.22□□□□□ -0.77
MSH3-201ENST00000265081 CNIH2Q6PI25 160 aa10.22□□□□□ -0.77
MSH3-201ENST00000265081 NCCRP1Q6ZVX7 275 aaPredicted RBP10.22□□□□□ -0.77
MSH3-201ENST00000265081 OAFQ86UD1 273 aa10.22□□□□□ -0.77
MSH3-201ENST00000265081 ZNF441Q8N8Z8 693 aa10.22□□□□□ -0.77
MSH3-201ENST00000265081 HDHD5Q9BXW7 423 aa10.22□□□□□ -0.77
MSH3-201ENST00000265081 ADAM19Q9H013 955 aa10.22□□□□□ -0.77
MSH3-201ENST00000265081 HMX3A6NHT5 357 aa10.22□□□□□ -0.77
MSH3-201ENST00000265081 LMO7DNF2Z398 122 aa10.22□□□□□ -0.77
MSH3-201ENST00000265081 HPGDSO60760 199 aa10.22□□□□□ -0.77
MSH3-201ENST00000265081 CD38P28907 300 aa10.22□□□□□ -0.77
MSH3-201ENST00000265081 PPICP45877 212 aa10.22□□□□□ -0.77
MSH3-201ENST00000265081 DLX5P56178 289 aa10.22□□□□□ -0.77
MSH3-201ENST00000265081 OR2B6P58173 313 aa10.22□□□□□ -0.77
MSH3-201ENST00000265081 SRSF5Q13243 272 aaKnown RBP10.22□□□□□ -0.77
MSH3-201ENST00000265081 LINC01590Q5TEZ4 76 aa10.22□□□□□ -0.77
MSH3-201ENST00000265081 HACD4Q5VWC8 232 aa10.22□□□□□ -0.77
MSH3-201ENST00000265081 MZT2AQ6P582 158 aa10.22□□□□□ -0.77
MSH3-201ENST00000265081 ZNF517Q6ZMY9 492 aaPredicted RBP10.22□□□□□ -0.77
MSH3-201ENST00000265081 OR51Q1Q8NH59 317 aa10.22□□□□□ -0.77
MSH3-201ENST00000265081 OR4C6Q8NH72 309 aa10.22□□□□□ -0.77
MSH3-201ENST00000265081 ZNF721Q8TF20 911 aa10.22□□□□□ -0.77
MSH3-201ENST00000265081 TRIM63Q969Q1 353 aa10.22□□□□□ -0.77
MSH3-201ENST00000265081 DIRAS2Q96HU8 199 aa10.22□□□□□ -0.77
MSH3-201ENST00000265081 TOR4AQ9NXH8 423 aa10.22□□□□□ -0.77
MSH3-201ENST00000265081 LRIT1Q9P2V4 623 aa10.22□□□□□ -0.77
MSH3-201ENST00000265081 PAIP2BQ9ULR5 123 aaKnown RBP10.22□□□□□ -0.77
MSH3-201ENST00000265081 SLC6A5Q9Y345 797 aa10.22□□□□□ -0.77
MSH3-201ENST00000265081 TMEM265A0A087WTH1 108 aa10.22□□□□□ -0.77
MSH3-201ENST00000265081 A0A1W2PQD3 144 aa10.22□□□□□ -0.77
MSH3-201ENST00000265081 DAPL1A0PJW8 107 aa10.22□□□□□ -0.77
MSH3-201ENST00000265081 MCIDASD6RGH6 385 aa10.22□□□□□ -0.77
MSH3-201ENST00000265081 CLDN4O14493 209 aa10.22□□□□□ -0.77
MSH3-201ENST00000265081 CASKO14936 926 aa10.22□□□□□ -0.77
MSH3-201ENST00000265081 CLUP10909 449 aa10.22□□□□□ -0.77
MSH3-201ENST00000265081 HIST1H1CP16403 213 aaKnown RBP10.22□□□□□ -0.77
MSH3-201ENST00000265081 PAICSP22234 425 aaKnown RBP10.22□□□□□ -0.77
MSH3-201ENST00000265081 APEX1P27695 318 aaKnown RBP10.22□□□□□ -0.77
MSH3-201ENST00000265081 RBMS1P29558 406 aaKnown RBP10.22□□□□□ -0.77
MSH3-201ENST00000265081 DIO1P49895 249 aa10.22□□□□□ -0.77
MSH3-201ENST00000265081 ACTA2P62736 377 aa10.22□□□□□ -0.77
MSH3-201ENST00000265081 ACTG2P63267 376 aa10.22□□□□□ -0.77
MSH3-201ENST00000265081 E2F1Q01094 437 aa10.22□□□□□ -0.77
MSH3-201ENST00000265081 HSF2Q03933 536 aa10.22□□□□□ -0.77
MSH3-201ENST00000265081 C1orf61Q13536 156 aa10.22□□□□□ -0.77
MSH3-201ENST00000265081 LRRC28Q86X40 367 aaPredicted RBP10.22□□□□□ -0.77
MSH3-201ENST00000265081 C17orf47Q8NEP4 570 aa10.22□□□□□ -0.77
MSH3-201ENST00000265081 GRHL3Q8TE85 626 aa10.22□□□□□ -0.77
MSH3-201ENST00000265081 SGTBQ96EQ0 304 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms