RNA–Protein interactions for RNA: ENST00000264883.7

NUP54-201, Transcript of nucleoporin 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP54, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-201ENST00000264883 NEDD8-MDP1E9PL57 170 aa12.15□□□□□ -0.46
NUP54-201ENST00000264883 WRBO00258 174 aa12.15□□□□□ -0.46
NUP54-201ENST00000264883 SURF4O15260 269 aa12.15□□□□□ -0.46
NUP54-201ENST00000264883 RAD1O60671 282 aa12.15□□□□□ -0.46
NUP54-201ENST00000264883 CTSAP10619 480 aa12.15□□□□□ -0.46
NUP54-201ENST00000264883 CBR1P16152 277 aa12.15□□□□□ -0.46
NUP54-201ENST00000264883 NOS3P29474 1203 aa12.15□□□□□ -0.46
NUP54-201ENST00000264883 PRKAR1BP31321 381 aa12.15□□□□□ -0.46
NUP54-201ENST00000264883 CTSOP43234 321 aaPredicted RBP12.15□□□□□ -0.46
NUP54-201ENST00000264883 ANXA11P50995 505 aaKnown RBP12.15□□□□□ -0.46
NUP54-201ENST00000264883 ART1P52961 327 aa12.15□□□□□ -0.46
NUP54-201ENST00000264883 MANFP55145 182 aaKnown RBP12.15□□□□□ -0.46
NUP54-201ENST00000264883 MLC1Q15049 377 aa12.15□□□□□ -0.46
NUP54-201ENST00000264883 C2orf68Q2NKX9 166 aa12.15□□□□□ -0.46
NUP54-201ENST00000264883 FAM109BQ6ICB4 259 aaPredicted RBP12.15□□□□□ -0.46
NUP54-201ENST00000264883 CFAP206Q8IYR0 622 aa12.15□□□□□ -0.46
NUP54-201ENST00000264883 BBS10Q8TAM1 723 aa12.15□□□□□ -0.46
NUP54-201ENST00000264883 SMPDL3AQ92484 453 aa12.15□□□□□ -0.46
NUP54-201ENST00000264883 PRRC1Q96M27 445 aa12.15□□□□□ -0.46
NUP54-201ENST00000264883 TBX5Q99593 518 aa12.15□□□□□ -0.46
NUP54-201ENST00000264883 SMAD5Q99717 465 aaKnown RBP12.15□□□□□ -0.46
NUP54-201ENST00000264883 PAPOLGQ9BWT3 736 aaKnown RBP12.15□□□□□ -0.46
NUP54-201ENST00000264883 MRPL17Q9NRX2 175 aaKnown RBP12.15□□□□□ -0.46
NUP54-201ENST00000264883 CLEC4EQ9ULY5 219 aa12.15□□□□□ -0.46
NUP54-201ENST00000264883 OR2W5A6NFC9 320 aa12.15□□□□□ -0.46
NUP54-201ENST00000264883 SOCS6O14544 535 aa12.15□□□□□ -0.46
NUP54-201ENST00000264883 GOSR2O14653 212 aa12.15□□□□□ -0.46
NUP54-201ENST00000264883 BNIP3LO60238 219 aa12.15□□□□□ -0.46
NUP54-201ENST00000264883 EIF4E2O60573 245 aaKnown RBP12.15□□□□□ -0.46
NUP54-201ENST00000264883 CXCL14O95715 111 aa12.15□□□□□ -0.46
NUP54-201ENST00000264883 ATP1B1P05026 303 aa12.15□□□□□ -0.46
NUP54-201ENST00000264883 SELLP14151 372 aa12.15□□□□□ -0.46
NUP54-201ENST00000264883 SPI1P17947 270 aa12.15□□□□□ -0.46
NUP54-201ENST00000264883 ADCYAP1P18509 176 aa12.15□□□□□ -0.46
NUP54-201ENST00000264883 PAICSP22234 425 aaKnown RBP12.15□□□□□ -0.46
NUP54-201ENST00000264883 AKR1C2P52895 323 aa12.15□□□□□ -0.46
NUP54-201ENST00000264883 RAB5BP61020 215 aa12.15□□□□□ -0.46
NUP54-201ENST00000264883 AKR1C1Q04828 323 aa12.15□□□□□ -0.46
NUP54-201ENST00000264883 TMEM240Q5SV17 173 aa12.15□□□□□ -0.46
NUP54-201ENST00000264883 FAAP20Q6NZ36 180 aa12.15□□□□□ -0.46
NUP54-201ENST00000264883 C6orf120Q7Z4R8 191 aa12.15□□□□□ -0.46
NUP54-201ENST00000264883 PXKQ7Z7A4 578 aa12.15□□□□□ -0.46
NUP54-201ENST00000264883 COMTD1Q86VU5 262 aa12.15□□□□□ -0.46
NUP54-201ENST00000264883 TCEAL8Q8IYN2 117 aa12.15□□□□□ -0.46
NUP54-201ENST00000264883 NRSN1Q8IZ57 195 aa12.15□□□□□ -0.46
NUP54-201ENST00000264883 TBC1D19Q8N5T2 526 aa12.15□□□□□ -0.46
NUP54-201ENST00000264883 ACBD7Q8N6N7 88 aa12.15□□□□□ -0.46
NUP54-201ENST00000264883 AUTS2Q8WXX7 1259 aa12.15□□□□□ -0.46
NUP54-201ENST00000264883 CAMK1GQ96NX5 476 aa12.15□□□□□ -0.46
NUP54-201ENST00000264883 UTP23Q9BRU9 249 aaKnown RBP12.15□□□□□ -0.46
NUP54-201ENST00000264883 RIOK2Q9BVS4 552 aaKnown RBP12.15□□□□□ -0.46
NUP54-201ENST00000264883 ZCCHC2Q9C0B9 1178 aaKnown RBP12.15□□□□□ -0.46
NUP54-201ENST00000264883 QRSL1Q9H0R6 528 aaKnown RBP12.15□□□□□ -0.46
NUP54-201ENST00000264883 ZBP1Q9H171 429 aa12.15□□□□□ -0.46
NUP54-201ENST00000264883 CACYBPQ9HB71 228 aaKnown RBP12.15□□□□□ -0.46
NUP54-201ENST00000264883 ACSS1Q9NUB1 689 aaPredicted RBP12.15□□□□□ -0.46
NUP54-201ENST00000264883 DCAF16Q9NXF7 216 aa12.15□□□□□ -0.46
NUP54-201ENST00000264883 KLHL9Q9P2J3 617 aa12.15□□□□□ -0.46
NUP54-201ENST00000264883 OR10H1Q9Y4A9 318 aa12.15□□□□□ -0.46
NUP54-201ENST00000264883 MEX3AA1L020 520 aaKnown RBP12.14□□□□□ -0.47
NUP54-201ENST00000264883 TMEM200CA6NKL6 621 aa12.14□□□□□ -0.47
NUP54-201ENST00000264883 HMGN4O00479 90 aa12.14□□□□□ -0.47
NUP54-201ENST00000264883 STX11O75558 287 aa12.14□□□□□ -0.47
NUP54-201ENST00000264883 POP7O75817 140 aaKnown RBP12.14□□□□□ -0.47
NUP54-201ENST00000264883 KRT33AO76009 404 aa12.14□□□□□ -0.47
NUP54-201ENST00000264883 ASGR2P07307 311 aa12.14□□□□□ -0.47
NUP54-201ENST00000264883 EPXP11678 715 aa12.14□□□□□ -0.47
NUP54-201ENST00000264883 TYRP1P17643 537 aa12.14□□□□□ -0.47
NUP54-201ENST00000264883 CD53P19397 219 aa12.14□□□□□ -0.47
NUP54-201ENST00000264883 SORDQ00796 357 aa12.14□□□□□ -0.47
NUP54-201ENST00000264883 TMEM115Q12893 351 aaPredicted RBP12.14□□□□□ -0.47
NUP54-201ENST00000264883 ECH1Q13011 328 aa12.14□□□□□ -0.47
NUP54-201ENST00000264883 PDZK1IP1Q13113 114 aa12.14□□□□□ -0.47
NUP54-201ENST00000264883 RBMS2Q15434 407 aaKnown RBP12.14□□□□□ -0.47
NUP54-201ENST00000264883 UBE2NLQ5JXB2 153 aa12.14□□□□□ -0.47
NUP54-201ENST00000264883 TXNDC8Q6A555 127 aa12.14□□□□□ -0.47
NUP54-201ENST00000264883 FAM180BQ6P0A1 224 aa12.14□□□□□ -0.47
NUP54-201ENST00000264883 LCTLQ6UWM7 567 aa12.14□□□□□ -0.47
NUP54-201ENST00000264883 Q6ZVL8 140 aa12.14□□□□□ -0.47
NUP54-201ENST00000264883 SKA3Q8IX90 412 aa12.14□□□□□ -0.47
NUP54-201ENST00000264883 CMTM4Q8IZR5 234 aa12.14□□□□□ -0.47
NUP54-201ENST00000264883 OR4Q3Q8NH05 313 aa12.14□□□□□ -0.47
NUP54-201ENST00000264883 ZNF671Q8TAW3 534 aa12.14□□□□□ -0.47
NUP54-201ENST00000264883 PHOSPHO1Q8TCT1 267 aa12.14□□□□□ -0.47
NUP54-201ENST00000264883 SMAP2Q8WU79 429 aaPredicted RBP12.14□□□□□ -0.47
NUP54-201ENST00000264883 PEX11GQ96HA9 241 aa12.14□□□□□ -0.47
NUP54-201ENST00000264883 SLC38A1Q9H2H9 487 aa12.14□□□□□ -0.47
NUP54-201ENST00000264883 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.14□□□□□ -0.47
NUP54-201ENST00000264883 CNIH4Q9P003 139 aa12.14□□□□□ -0.47
NUP54-201ENST00000264883 E9PI62 339 aa12.14□□□□□ -0.47
NUP54-201ENST00000264883 GABARAPH6UMI1 98 aa12.14□□□□□ -0.47
NUP54-201ENST00000264883 J3QRE1 110 aa12.14□□□□□ -0.47
NUP54-201ENST00000264883 SAP18O00422 153 aaKnown RBP12.14□□□□□ -0.47
NUP54-201ENST00000264883 PLPP2O43688 288 aa12.14□□□□□ -0.47
NUP54-201ENST00000264883 PIP5K1CO60331 668 aa12.14□□□□□ -0.47
NUP54-201ENST00000264883 OBSL1O75147 1896 aa12.14□□□□□ -0.47
NUP54-201ENST00000264883 REM1O75628 298 aa12.14□□□□□ -0.47
NUP54-201ENST00000264883 PAK4O96013 591 aaPredicted RBP12.14□□□□□ -0.47
NUP54-201ENST00000264883 GNSP15586 552 aa12.14□□□□□ -0.47
NUP54-201ENST00000264883 MECP2P51608 486 aaKnown RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms