RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 LIM2P55344 173 aa13.01□□□□□ -0.33
CDH3-201ENST00000264012 EEF1A1P68104 462 aaKnown RBP13.01□□□□□ -0.33
CDH3-201ENST00000264012 FOXK1P85037 733 aa13.01□□□□□ -0.33
CDH3-201ENST00000264012 ARL6IP1Q15041 203 aa13.01□□□□□ -0.33
CDH3-201ENST00000264012 PCGF3Q3KNV8 242 aa13.01□□□□□ -0.33
CDH3-201ENST00000264012 B3GLCTQ6Y288 498 aa13.01□□□□□ -0.33
CDH3-201ENST00000264012 ENTHD1Q8IYW4 607 aa13.01□□□□□ -0.33
CDH3-201ENST00000264012 BEST3Q8N1M1 668 aa13.01□□□□□ -0.33
CDH3-201ENST00000264012 CLEC1AQ8NC01 280 aa13.01□□□□□ -0.33
CDH3-201ENST00000264012 OR6Q1Q8NGQ2 317 aa13.01□□□□□ -0.33
CDH3-201ENST00000264012 LCORQ96JN0 433 aaPredicted RBP13.01□□□□□ -0.33
CDH3-201ENST00000264012 OR6C1Q96RD1 312 aa13.01□□□□□ -0.33
CDH3-201ENST00000264012 ZNF587Q96SQ5 575 aaPredicted RBP13.01□□□□□ -0.33
CDH3-201ENST00000264012 MEN1O00255 615 aa13.01□□□□□ -0.33
CDH3-201ENST00000264012 DIRAS3O95661 229 aa13.01□□□□□ -0.33
CDH3-201ENST00000264012 IL1AP01583 271 aa13.01□□□□□ -0.33
CDH3-201ENST00000264012 CTSLP07711 333 aa13.01□□□□□ -0.33
CDH3-201ENST00000264012 AKR1C4P17516 323 aa13.01□□□□□ -0.33
CDH3-201ENST00000264012 DCDP81605 110 aaKnown RBP13.01□□□□□ -0.33
CDH3-201ENST00000264012 VASNQ6EMK4 673 aa13.01□□□□□ -0.33
CDH3-201ENST00000264012 BHLHA9Q7RTU4 235 aa13.01□□□□□ -0.33
CDH3-201ENST00000264012 ZNF578Q96N58 590 aaPredicted RBP13.01□□□□□ -0.33
CDH3-201ENST00000264012 SGPP1Q9BX95 441 aa13.01□□□□□ -0.33
CDH3-201ENST00000264012 GDF1P27539 372 aa13□□□□□ -0.33
CDH3-201ENST00000264012 PIGAP37287 484 aa13□□□□□ -0.33
CDH3-201ENST00000264012 MMP21Q8N119 569 aa13□□□□□ -0.33
CDH3-201ENST00000264012 NANOS1Q8WY41 292 aaKnown RBP13□□□□□ -0.33
CDH3-201ENST00000264012 SLC46A1Q96NT5 459 aa13□□□□□ -0.33
CDH3-201ENST00000264012 CHRDQ9H2X0 955 aa13□□□□□ -0.33
CDH3-201ENST00000264012 ICKQ9UPZ9 632 aa13□□□□□ -0.33
CDH3-201ENST00000264012 ARHGAP33O14559 1287 aa13□□□□□ -0.33
CDH3-201ENST00000264012 SIGLEC6O43699 453 aa13□□□□□ -0.33
CDH3-201ENST00000264012 PTHP01270 115 aa13□□□□□ -0.33
CDH3-201ENST00000264012 OR7E24Q6IFN5 339 aa13□□□□□ -0.33
CDH3-201ENST00000264012 BEND4Q6ZU67 534 aa13□□□□□ -0.33
CDH3-201ENST00000264012 SERPINA12Q8IW75 414 aa13□□□□□ -0.33
CDH3-201ENST00000264012 TDHQ8IZJ6 230 aa13□□□□□ -0.33
CDH3-201ENST00000264012 PRR14Q9BWN1 585 aa13□□□□□ -0.33
CDH3-201ENST00000264012 MKRN2Q9H000 416 aaKnown RBP13□□□□□ -0.33
CDH3-201ENST00000264012 ARL6Q9H0F7 186 aa13□□□□□ -0.33
CDH3-201ENST00000264012 POLHQ9Y253 713 aa13□□□□□ -0.33
CDH3-201ENST00000264012 MMACHCQ9Y4U1 282 aa13□□□□□ -0.33
CDH3-201ENST00000264012 V9GY05 133 aa13□□□□□ -0.33
CDH3-201ENST00000264012 DOCK1Q14185 1865 aa13□□□□□ -0.33
CDH3-201ENST00000264012 PTPRZ1P23471 2315 aaPredicted RBP13□□□□□ -0.33
CDH3-201ENST00000264012 KDM4EB2RXH2 506 aaPredicted RBP13□□□□□ -0.33
CDH3-201ENST00000264012 CTDSP2O14595 271 aa13□□□□□ -0.33
CDH3-201ENST00000264012 CRTAPO75718 401 aaPredicted RBP13□□□□□ -0.33
CDH3-201ENST00000264012 HTR3BO95264 441 aa13□□□□□ -0.33
CDH3-201ENST00000264012 TSPAN12O95859 305 aa13□□□□□ -0.33
CDH3-201ENST00000264012 POU3F2P20265 443 aaPredicted RBP13□□□□□ -0.33
CDH3-201ENST00000264012 MAOAP21397 527 aa13□□□□□ -0.33
CDH3-201ENST00000264012 GPR50Q13585 617 aa13□□□□□ -0.33
CDH3-201ENST00000264012 DUSP7Q16829 419 aa13□□□□□ -0.33
CDH3-201ENST00000264012 CHPT1Q8WUD6 406 aa13□□□□□ -0.33
CDH3-201ENST00000264012 RSC1A1Q92681 617 aa13□□□□□ -0.33
CDH3-201ENST00000264012 C19orf43Q9BQ61 176 aa13□□□□□ -0.33
CDH3-201ENST00000264012 OR52A5Q9H2C5 316 aa13□□□□□ -0.33
CDH3-201ENST00000264012 MLXQ9UH92 298 aa13□□□□□ -0.33
CDH3-201ENST00000264012 ACAD8Q9UKU7 415 aa13□□□□□ -0.33
CDH3-201ENST00000264012 MCTS1Q9ULC4 181 aaKnown RBP13□□□□□ -0.33
CDH3-201ENST00000264012 IGHG1P01857 330 aa13□□□□□ -0.33
CDH3-201ENST00000264012 RAB3AP20336 220 aa13□□□□□ -0.33
CDH3-201ENST00000264012 TNFSF8P32971 234 aa13□□□□□ -0.33
CDH3-201ENST00000264012 AQP2P41181 271 aa13□□□□□ -0.33
CDH3-201ENST00000264012 SLC1A3P43003 542 aa13□□□□□ -0.33
CDH3-201ENST00000264012 PAPD4Q6PIY7 484 aaKnown RBP13□□□□□ -0.33
CDH3-201ENST00000264012 GDF7Q7Z4P5 450 aa13□□□□□ -0.33
CDH3-201ENST00000264012 OR5H2Q8NGV7 314 aa13□□□□□ -0.33
CDH3-201ENST00000264012 TMEM255BQ8WV15 326 aa13□□□□□ -0.33
CDH3-201ENST00000264012 PATE1Q8WXA2 126 aa13□□□□□ -0.33
CDH3-201ENST00000264012 PHF7Q9BWX1 381 aaPredicted RBP13□□□□□ -0.33
CDH3-201ENST00000264012 ELOVL3Q9HB03 270 aa13□□□□□ -0.33
CDH3-201ENST00000264012 LYRM4Q9HD34 91 aa13□□□□□ -0.33
CDH3-201ENST00000264012 SLC6A20Q9NP91 592 aa13□□□□□ -0.33
CDH3-201ENST00000264012 PCDH10Q9P2E7 1040 aa13□□□□□ -0.33
CDH3-201ENST00000264012 DAPP1Q9UN19 280 aa13□□□□□ -0.33
CDH3-201ENST00000264012 NARSO43776 548 aaKnown RBP12.99□□□□□ -0.33
CDH3-201ENST00000264012 HPGDSO60760 199 aa12.99□□□□□ -0.33
CDH3-201ENST00000264012 UTS2O95399 124 aa12.99□□□□□ -0.33
CDH3-201ENST00000264012 CPNE6O95741 557 aa12.99□□□□□ -0.33
CDH3-201ENST00000264012 HRGP04196 525 aa12.99□□□□□ -0.33
CDH3-201ENST00000264012 EPHA5P54756 1037 aa12.99□□□□□ -0.33
CDH3-201ENST00000264012 ARG2P78540 354 aa12.99□□□□□ -0.33
CDH3-201ENST00000264012 FGL2Q14314 439 aa12.99□□□□□ -0.33
CDH3-201ENST00000264012 C3orf38Q5JPI3 329 aa12.99□□□□□ -0.33
CDH3-201ENST00000264012 ASTLQ6HA08 431 aaPredicted RBP12.99□□□□□ -0.33
CDH3-201ENST00000264012 ABHD12BQ7Z5M8 362 aaPredicted RBP12.99□□□□□ -0.33
CDH3-201ENST00000264012 TMEM150AQ86TG1 271 aa12.99□□□□□ -0.33
CDH3-201ENST00000264012 ARL14Q8N4G2 192 aa12.99□□□□□ -0.33
CDH3-201ENST00000264012 ZNF582Q96NG8 517 aaPredicted RBP12.99□□□□□ -0.33
CDH3-201ENST00000264012 CDH20Q9HBT6 801 aa12.99□□□□□ -0.33
CDH3-201ENST00000264012 SLC25A37Q9NYZ2 338 aa12.99□□□□□ -0.33
CDH3-201ENST00000264012 SLC23A2Q9UGH3 650 aa12.99□□□□□ -0.33
CDH3-201ENST00000264012 POU2F3Q9UKI9 436 aa12.99□□□□□ -0.33
CDH3-201ENST00000264012 TMEM269A0A1B0GVZ9 245 aa12.99□□□□□ -0.33
CDH3-201ENST00000264012 A0A1W2PR48 441 aa12.99□□□□□ -0.33
CDH3-201ENST00000264012 GABRPO00591 440 aa12.99□□□□□ -0.33
CDH3-201ENST00000264012 TMPRSS11DO60235 418 aa12.99□□□□□ -0.33
CDH3-201ENST00000264012 SUSD5O60279 629 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms