RNA–Protein interactions for RNA: ENST00000263274.11

LIG1-201, Transcript of DNA ligase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIG1, Length 3,384 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-201ENST00000263274 IGHA1P01876 353 aa11.7□□□□□ -0.54
LIG1-201ENST00000263274 HNRNPA1P09651 372 aaKnown RBP eCLIP11.7□□□□□ -0.54
LIG1-201ENST00000263274 CPMP14384 443 aa11.7□□□□□ -0.54
LIG1-201ENST00000263274 HK1P19367 917 aa11.7□□□□□ -0.54
LIG1-201ENST00000263274 CTAG1AP78358 180 aa11.7□□□□□ -0.54
LIG1-201ENST00000263274 ZNF767PQ75MW2 155 aa11.7□□□□□ -0.54
LIG1-201ENST00000263274 MFSD9Q8NBP5 474 aa11.7□□□□□ -0.54
LIG1-201ENST00000263274 OR11H7Q8NGC8 314 aa11.7□□□□□ -0.54
LIG1-201ENST00000263274 OR8K3Q8NH51 312 aa11.7□□□□□ -0.54
LIG1-201ENST00000263274 PATE1Q8WXA2 126 aa11.7□□□□□ -0.54
LIG1-201ENST00000263274 RERGQ96A58 199 aaPredicted RBP11.7□□□□□ -0.54
LIG1-201ENST00000263274 APOOQ9BUR5 198 aa11.7□□□□□ -0.54
LIG1-201ENST00000263274 MED17Q9NVC6 651 aa11.7□□□□□ -0.54
LIG1-201ENST00000263274 LYARQ9NX58 379 aaKnown RBP11.7□□□□□ -0.54
LIG1-201ENST00000263274 GTF2A1LQ9UNN4 478 aa11.7□□□□□ -0.54
LIG1-201ENST00000263274 IER3IP1Q9Y5U9 82 aa11.7□□□□□ -0.54
LIG1-201ENST00000263274 SPACA6W5XKT8 324 aa11.7□□□□□ -0.54
LIG1-201ENST00000263274 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.7□□□□□ -0.54
LIG1-201ENST00000263274 OR2W5A6NFC9 320 aa11.7□□□□□ -0.54
LIG1-201ENST00000263274 IFNGP01579 166 aa11.7□□□□□ -0.54
LIG1-201ENST00000263274 SLC6A1P30531 599 aa11.7□□□□□ -0.54
LIG1-201ENST00000263274 GDI1P31150 447 aa11.7□□□□□ -0.54
LIG1-201ENST00000263274 GDI2P50395 445 aaKnown RBP11.7□□□□□ -0.54
LIG1-201ENST00000263274 SNTA1Q13424 505 aa11.7□□□□□ -0.54
LIG1-201ENST00000263274 ALG10BQ5I7T1 473 aa11.7□□□□□ -0.54
LIG1-201ENST00000263274 FAAP20Q6NZ36 180 aa11.7□□□□□ -0.54
LIG1-201ENST00000263274 FAM122CQ6P4D5 195 aa11.7□□□□□ -0.54
LIG1-201ENST00000263274 ZAR1Q86SH2 424 aa11.7□□□□□ -0.54
LIG1-201ENST00000263274 ZNF619Q8N2I2 560 aa11.7□□□□□ -0.54
LIG1-201ENST00000263274 FRMD1Q8N878 549 aa11.7□□□□□ -0.54
LIG1-201ENST00000263274 NR4A3Q92570 626 aa11.7□□□□□ -0.54
LIG1-201ENST00000263274 BADQ92934 168 aa11.7□□□□□ -0.54
LIG1-201ENST00000263274 GIMAP5Q96F15 307 aa11.7□□□□□ -0.54
LIG1-201ENST00000263274 TEX101Q9BY14 249 aa11.7□□□□□ -0.54
LIG1-201ENST00000263274 DIABLOQ9NR28 239 aa11.7□□□□□ -0.54
LIG1-201ENST00000263274 EVA1BQ9NVM1 165 aa11.7□□□□□ -0.54
LIG1-201ENST00000263274 MRPS2Q9Y399 296 aaKnown RBP11.7□□□□□ -0.54
LIG1-201ENST00000263274 ADAM18Q9Y3Q7 739 aa11.7□□□□□ -0.54
LIG1-201ENST00000263274 LEUTXA8MZ59 168 aa11.69□□□□□ -0.54
LIG1-201ENST00000263274 P2RX6O15547 441 aa11.69□□□□□ -0.54
LIG1-201ENST00000263274 HRGP04196 525 aa11.69□□□□□ -0.54
LIG1-201ENST00000263274 APODP05090 189 aa11.69□□□□□ -0.54
LIG1-201ENST00000263274 NUDT1P36639 197 aa11.69□□□□□ -0.54
LIG1-201ENST00000263274 ZNF136P52737 540 aa11.69□□□□□ -0.54
LIG1-201ENST00000263274 GBX2P52951 348 aaPredicted RBP11.69□□□□□ -0.54
LIG1-201ENST00000263274 AP2S1P53680 142 aaPredicted RBP11.69□□□□□ -0.54
LIG1-201ENST00000263274 RAB14P61106 215 aa11.69□□□□□ -0.54
LIG1-201ENST00000263274 ANGPT1Q15389 498 aa11.69□□□□□ -0.54
LIG1-201ENST00000263274 NDUFAF6Q330K2 333 aa11.69□□□□□ -0.54
LIG1-201ENST00000263274 SLC25A25Q6KCM7 469 aa11.69□□□□□ -0.54
LIG1-201ENST00000263274 POMZP3Q6PJE2 187 aa11.69□□□□□ -0.54
LIG1-201ENST00000263274 CHMP1BQ7LBR1 199 aa11.69□□□□□ -0.54
LIG1-201ENST00000263274 GAL3ST3Q96A11 431 aa11.69□□□□□ -0.54
LIG1-201ENST00000263274 ASB16Q96NS5 453 aa11.69□□□□□ -0.54
LIG1-201ENST00000263274 DERL3Q96Q80 235 aa11.69□□□□□ -0.54
LIG1-201ENST00000263274 IMPA2O14732 288 aa11.69□□□□□ -0.54
LIG1-201ENST00000263274 DBIP07108 87 aaKnown RBP11.69□□□□□ -0.54
LIG1-201ENST00000263274 ZNF250P15622 560 aa11.69□□□□□ -0.54
LIG1-201ENST00000263274 ATF1P18846 271 aa11.69□□□□□ -0.54
LIG1-201ENST00000263274 TNFRSF17Q02223 184 aa11.69□□□□□ -0.54
LIG1-201ENST00000263274 ZMYND11Q15326 602 aa11.69□□□□□ -0.54
LIG1-201ENST00000263274 FIP1L1Q6UN15 594 aaKnown RBP11.69□□□□□ -0.54
LIG1-201ENST00000263274 NUDT18Q6ZVK8 323 aa11.69□□□□□ -0.54
LIG1-201ENST00000263274 CREB3L2Q70SY1 520 aa11.69□□□□□ -0.54
LIG1-201ENST00000263274 GPALPP1Q8IXQ4 340 aa11.69□□□□□ -0.54
LIG1-201ENST00000263274 RPLP0P6Q8NHW5 317 aa11.69□□□□□ -0.54
LIG1-201ENST00000263274 CEP76Q8TAP6 659 aa11.69□□□□□ -0.54
LIG1-201ENST00000263274 C11orf49Q9H6J7 331 aa11.69□□□□□ -0.54
LIG1-201ENST00000263274 IL21RQ9HBE5 538 aa11.69□□□□□ -0.54
LIG1-201ENST00000263274 PHF11Q9UIL8 331 aa11.69□□□□□ -0.54
LIG1-201ENST00000263274 NUP50Q9UKX7 468 aa11.69□□□□□ -0.54
LIG1-201ENST00000263274 SLC35A3Q9Y2D2 325 aa11.69□□□□□ -0.54
LIG1-201ENST00000263274 IDSB3KWA1 339 aa11.68□□□□□ -0.54
LIG1-201ENST00000263274 BLOC1S5-TXNDC5H3BN57 136 aa11.68□□□□□ -0.54
LIG1-201ENST00000263274 FGF17O60258 216 aa11.68□□□□□ -0.54
LIG1-201ENST00000263274 TYRP1P17643 537 aa11.68□□□□□ -0.54
LIG1-201ENST00000263274 CENPAP49450 140 aa11.68□□□□□ -0.54
LIG1-201ENST00000263274 PGDP52209 483 aa11.68□□□□□ -0.54
LIG1-201ENST00000263274 FXYD6P3P58550 94 aa11.68□□□□□ -0.54
LIG1-201ENST00000263274 RPS21P63220 83 aaKnown RBP11.68□□□□□ -0.54
LIG1-201ENST00000263274 OTPQ5XKR4 325 aa11.68□□□□□ -0.54
LIG1-201ENST00000263274 TIGD3Q6B0B8 471 aa11.68□□□□□ -0.54
LIG1-201ENST00000263274 KCTD20Q7Z5Y7 419 aa11.68□□□□□ -0.54
LIG1-201ENST00000263274 ZNF527Q8NB42 609 aa11.68□□□□□ -0.54
LIG1-201ENST00000263274 LGALS14Q8TCE9 139 aa11.68□□□□□ -0.54
LIG1-201ENST00000263274 ZC3HAV1LQ96H79 300 aaKnown RBP11.68□□□□□ -0.54
LIG1-201ENST00000263274 HSPA12BQ96MM6 686 aa11.68□□□□□ -0.54
LIG1-201ENST00000263274 KCNJ15Q99712 375 aa11.68□□□□□ -0.54
LIG1-201ENST00000263274 GDF15Q99988 308 aa11.68□□□□□ -0.54
LIG1-201ENST00000263274 SOSTQ9BQB4 213 aa11.68□□□□□ -0.54
LIG1-201ENST00000263274 PRSS27Q9BQR3 290 aa11.68□□□□□ -0.54
LIG1-201ENST00000263274 ZNF649Q9BS31 505 aa11.68□□□□□ -0.54
LIG1-201ENST00000263274 TMEM168Q9H0V1 697 aa11.68□□□□□ -0.54
LIG1-201ENST00000263274 PIGUQ9H490 435 aa11.68□□□□□ -0.54
LIG1-201ENST00000263274 THAP10Q9P2Z0 257 aaPredicted RBP11.68□□□□□ -0.54
LIG1-201ENST00000263274 RCE1Q9Y256 329 aa11.68□□□□□ -0.54
LIG1-201ENST00000263274 KIAA1671Q9BY89 1806 aa11.68□□□□□ -0.54
LIG1-201ENST00000263274 ASCC3Q8N3C0 2202 aaKnown RBP11.68□□□□□ -0.54
LIG1-201ENST00000263274 CTSVO60911 334 aa11.68□□□□□ -0.54
LIG1-201ENST00000263274 TRIM3O75382 744 aaPredicted RBP11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms