RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 OR2M2Q96R28 347 aa11.28□□□□□ -0.6
SMG6-201ENST00000263073 C1GALT1Q9NS00 363 aa11.28□□□□□ -0.6
SMG6-201ENST00000263073 KCNIP1Q9NZI2 227 aa11.28□□□□□ -0.6
SMG6-201ENST00000263073 URGCP-MRPS24S4R325 110 aa11.28□□□□□ -0.6
SMG6-201ENST00000263073 ANKRD28O15084 1053 aa11.27□□□□□ -0.6
SMG6-201ENST00000263073 HMGB3O15347 200 aaKnown RBP11.27□□□□□ -0.6
SMG6-201ENST00000263073 SERPINE2P07093 398 aa11.27□□□□□ -0.6
SMG6-201ENST00000263073 DLX5P56178 289 aa11.27□□□□□ -0.6
SMG6-201ENST00000263073 CHRNEQ04844 493 aa11.27□□□□□ -0.6
SMG6-201ENST00000263073 PEA15Q15121 130 aa11.27□□□□□ -0.6
SMG6-201ENST00000263073 CCDC71LQ8N9Z2 235 aa11.27□□□□□ -0.6
SMG6-201ENST00000263073 HPSE2Q8WWQ2 592 aa11.27□□□□□ -0.6
SMG6-201ENST00000263073 LINC01599Q8WXQ3 324 aa11.27□□□□□ -0.6
SMG6-201ENST00000263073 CPPED1Q9BRF8 314 aaPredicted RBP11.27□□□□□ -0.6
SMG6-201ENST00000263073 RETREG1Q9H6L5 497 aa11.27□□□□□ -0.6
SMG6-201ENST00000263073 CDHR4A6H8M9 788 aa11.27□□□□□ -0.61
SMG6-201ENST00000263073 METTL15A6NJ78 407 aa11.27□□□□□ -0.61
SMG6-201ENST00000263073 ACOT8O14734 319 aa11.27□□□□□ -0.61
SMG6-201ENST00000263073 RPA2P15927 270 aa11.27□□□□□ -0.61
SMG6-201ENST00000263073 ANXA7P20073 488 aaKnown RBP11.27□□□□□ -0.61
SMG6-201ENST00000263073 NFYAP23511 347 aaPredicted RBP11.27□□□□□ -0.61
SMG6-201ENST00000263073 BATF2Q8N1L9 274 aa11.27□□□□□ -0.61
SMG6-201ENST00000263073 RLIMQ9NVW2 624 aa11.27□□□□□ -0.61
SMG6-201ENST00000263073 POLHQ9Y253 713 aa11.27□□□□□ -0.61
SMG6-201ENST00000263073 ARFGEF2Q9Y6D5 1785 aa11.27□□□□□ -0.61
SMG6-201ENST00000263073 CICQ96RK0 1608 aaPredicted RBP11.27□□□□□ -0.61
SMG6-201ENST00000263073 MDFIC2A0A1B0GVS7 189 aa11.27□□□□□ -0.61
SMG6-201ENST00000263073 TNFRSF10AO00220 468 aa11.27□□□□□ -0.61
SMG6-201ENST00000263073 GAPDHSO14556 408 aaPredicted RBP11.27□□□□□ -0.61
SMG6-201ENST00000263073 PPP3CBP16298 524 aa11.27□□□□□ -0.61
SMG6-201ENST00000263073 UBE2KP61086 200 aa11.27□□□□□ -0.61
SMG6-201ENST00000263073 MRPS34P82930 218 aaKnown RBP11.27□□□□□ -0.61
SMG6-201ENST00000263073 MLC1Q15049 377 aa11.27□□□□□ -0.61
SMG6-201ENST00000263073 Q6ZNX1 250 aa11.27□□□□□ -0.61
SMG6-201ENST00000263073 SERINC2Q96SA4 455 aa11.27□□□□□ -0.61
SMG6-201ENST00000263073 ADOQ96SZ5 270 aa11.27□□□□□ -0.61
SMG6-201ENST00000263073 SLC17A9Q9BYT1 436 aa11.27□□□□□ -0.61
SMG6-201ENST00000263073 PHRF1Q9P1Y6 1649 aaKnown RBP11.27□□□□□ -0.61
SMG6-201ENST00000263073 IMPA2O14732 288 aa11.27□□□□□ -0.61
SMG6-201ENST00000263073 B3GALT4O96024 378 aa11.27□□□□□ -0.61
SMG6-201ENST00000263073 RAB5CP51148 216 aa11.27□□□□□ -0.61
SMG6-201ENST00000263073 LTB4RQ15722 352 aa11.27□□□□□ -0.61
SMG6-201ENST00000263073 CLLU1OSQ5K130 101 aa11.27□□□□□ -0.61
SMG6-201ENST00000263073 CST9LP1Q5W188 147 aa11.27□□□□□ -0.61
SMG6-201ENST00000263073 HEPHL1Q6MZM0 1159 aa11.27□□□□□ -0.61
SMG6-201ENST00000263073 TMEM151BQ8IW70 566 aa11.27□□□□□ -0.61
SMG6-201ENST00000263073 OR52E1Q8NGJ3 308 aa11.27□□□□□ -0.61
SMG6-201ENST00000263073 ZFYVE21Q9BQ24 234 aa11.27□□□□□ -0.61
SMG6-201ENST00000263073 TMEM100Q9NV29 134 aa11.27□□□□□ -0.61
SMG6-201ENST00000263073 CA5BQ9Y2D0 317 aa11.27□□□□□ -0.61
SMG6-201ENST00000263073 Q9Y3F1 56 aa11.27□□□□□ -0.61
SMG6-201ENST00000263073 ANKRD34BA5PLL1 514 aa11.26□□□□□ -0.61
SMG6-201ENST00000263073 MRPS14O60783 128 aaKnown RBP11.26□□□□□ -0.61
SMG6-201ENST00000263073 PEX14O75381 377 aa11.26□□□□□ -0.61
SMG6-201ENST00000263073 UBL4AP11441 157 aa11.26□□□□□ -0.61
SMG6-201ENST00000263073 ERVFC1P60507 584 aa11.26□□□□□ -0.61
SMG6-201ENST00000263073 MRPL49Q13405 166 aaKnown RBP11.26□□□□□ -0.61
SMG6-201ENST00000263073 SFRP5Q5T4F7 317 aa11.26□□□□□ -0.61
SMG6-201ENST00000263073 UNC5DQ6UXZ4 953 aa11.26□□□□□ -0.61
SMG6-201ENST00000263073 GHSRQ92847 366 aa11.26□□□□□ -0.61
SMG6-201ENST00000263073 RBPMSQ93062 196 aaKnown RBP11.26□□□□□ -0.61
SMG6-201ENST00000263073 ARSGQ96EG1 525 aa11.26□□□□□ -0.61
SMG6-201ENST00000263073 GPR78Q96P69 363 aa11.26□□□□□ -0.61
SMG6-201ENST00000263073 PRRT1Q99946 306 aa11.26□□□□□ -0.61
SMG6-201ENST00000263073 NAA11Q9BSU3 229 aaPredicted RBP11.26□□□□□ -0.61
SMG6-201ENST00000263073 PELI2Q9HAT8 420 aa11.26□□□□□ -0.61
SMG6-201ENST00000263073 PDLIM7Q9NR12 457 aa11.26□□□□□ -0.61
SMG6-201ENST00000263073 CD300LBA8K4G0 201 aa11.26□□□□□ -0.61
SMG6-201ENST00000263073 PMP2P02689 132 aa11.26□□□□□ -0.61
SMG6-201ENST00000263073 FAM213BQ8TBF2 198 aa11.26□□□□□ -0.61
SMG6-201ENST00000263073 ZNF480Q8WV37 535 aa11.26□□□□□ -0.61
SMG6-201ENST00000263073 SNX18Q96RF0 628 aa11.26□□□□□ -0.61
SMG6-201ENST00000263073 TMEM82A0PJX8 343 aa11.26□□□□□ -0.61
SMG6-201ENST00000263073 TMEM72A0PK05 275 aa11.26□□□□□ -0.61
SMG6-201ENST00000263073 HSBP1L1C9JCN9 74 aa11.26□□□□□ -0.61
SMG6-201ENST00000263073 AK1P00568 194 aa11.26□□□□□ -0.61
SMG6-201ENST00000263073 PDGFAP04085 211 aa11.26□□□□□ -0.61
SMG6-201ENST00000263073 IGFBP1P08833 259 aaPredicted RBP11.26□□□□□ -0.61
SMG6-201ENST00000263073 MAKP20794 623 aa11.26□□□□□ -0.61
SMG6-201ENST00000263073 IL32P24001 234 aa11.26□□□□□ -0.61
SMG6-201ENST00000263073 MAT1AQ00266 395 aaKnown RBP11.26□□□□□ -0.61
SMG6-201ENST00000263073 FAPQ12884 760 aa11.26□□□□□ -0.61
SMG6-201ENST00000263073 SFXN4Q6P4A7 337 aa11.26□□□□□ -0.61
SMG6-201ENST00000263073 SBSNQ6UWP8 590 aa11.26□□□□□ -0.61
SMG6-201ENST00000263073 ZNF705AQ6ZN79 300 aaPredicted RBP11.26□□□□□ -0.61
SMG6-201ENST00000263073 NLRP8Q86W28 1048 aa11.26□□□□□ -0.61
SMG6-201ENST00000263073 OR52I1Q8NGK6 324 aa11.26□□□□□ -0.61
SMG6-201ENST00000263073 CA14Q9ULX7 337 aa11.26□□□□□ -0.61
SMG6-201ENST00000263073 MYH1P12882 1939 aa11.26□□□□□ -0.61
SMG6-201ENST00000263073 MYH4Q9Y623 1939 aa11.26□□□□□ -0.61
SMG6-201ENST00000263073 GABRA5P31644 462 aa11.26□□□□□ -0.61
SMG6-201ENST00000263073 TAS2R31P59538 309 aa11.26□□□□□ -0.61
SMG6-201ENST00000263073 FAM57BQ71RH2 274 aa11.26□□□□□ -0.61
SMG6-201ENST00000263073 LRRC46Q96FV0 321 aa11.26□□□□□ -0.61
SMG6-201ENST00000263073 ZNF416Q9BWM5 594 aa11.26□□□□□ -0.61
SMG6-201ENST00000263073 WWTR1Q9GZV5 400 aa11.26□□□□□ -0.61
SMG6-201ENST00000263073 GFOD1Q9NXC2 390 aa11.26□□□□□ -0.61
SMG6-201ENST00000263073 PLEK2Q9NYT0 353 aa11.26□□□□□ -0.61
SMG6-201ENST00000263073 TMEM269A0A1B0GVZ9 245 aa11.26□□□□□ -0.61
SMG6-201ENST00000263073 BHLHE40O14503 412 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms