RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 FOXD4Q12950 439 aaPredicted RBP18.73■□□□□ 0.59
RTCA-201ENST00000260563 DGCR6Q14129 220 aa18.73■□□□□ 0.59
RTCA-201ENST00000260563 EXOC3L2Q2M3D2 409 aa18.73■□□□□ 0.59
RTCA-201ENST00000260563 PLPPR5Q32ZL2 321 aa18.73■□□□□ 0.59
RTCA-201ENST00000260563 TRILQ7L0X0 811 aa18.73■□□□□ 0.59
RTCA-201ENST00000260563 GDF7Q7Z4P5 450 aa18.73■□□□□ 0.59
RTCA-201ENST00000260563 HIPK1Q86Z02 1210 aa18.73■□□□□ 0.59
RTCA-201ENST00000260563 GHDCQ8N2G8 530 aa18.73■□□□□ 0.59
RTCA-201ENST00000260563 CADM2Q8N3J6 435 aa18.73■□□□□ 0.59
RTCA-201ENST00000260563 SDCCAG3Q96C92 435 aa18.73■□□□□ 0.59
RTCA-201ENST00000260563 NRBF2Q96F24 287 aa18.73■□□□□ 0.59
RTCA-201ENST00000260563 ALPK1Q96QP1 1244 aa18.73■□□□□ 0.59
RTCA-201ENST00000260563 MAN2C1Q9NTJ4 1040 aa18.73■□□□□ 0.59
RTCA-201ENST00000260563 ZGRF1Q86YA3 2104 aa18.72■□□□□ 0.59
RTCA-201ENST00000260563 A0A0B4J2E0 115 aa18.72■□□□□ 0.59
RTCA-201ENST00000260563 A0A1B0GX12 115 aa18.72■□□□□ 0.59
RTCA-201ENST00000260563 PDLIM1O00151 329 aa18.72■□□□□ 0.59
RTCA-201ENST00000260563 HCN1O60741 890 aa18.72■□□□□ 0.59
RTCA-201ENST00000260563 EDN3P14138 238 aa18.72■□□□□ 0.59
RTCA-201ENST00000260563 IDH2P48735 452 aaKnown RBP18.72■□□□□ 0.59
RTCA-201ENST00000260563 TRAM2Q15035 370 aa18.72■□□□□ 0.59
RTCA-201ENST00000260563 QPRTQ15274 297 aa18.72■□□□□ 0.59
RTCA-201ENST00000260563 TOMM34Q15785 309 aaPredicted RBP18.72■□□□□ 0.59
RTCA-201ENST00000260563 GLYR1Q49A26 553 aaPredicted RBP18.72■□□□□ 0.59
RTCA-201ENST00000260563 FGD3Q5JSP0 725 aa18.72■□□□□ 0.59
RTCA-201ENST00000260563 WBP2NLQ6ICG8 309 aa18.72■□□□□ 0.59
RTCA-201ENST00000260563 NEIL3Q8TAT5 605 aa18.72■□□□□ 0.59
RTCA-201ENST00000260563 TMEM234Q8WY98 164 aa18.72■□□□□ 0.59
RTCA-201ENST00000260563 SFXN2Q96NB2 322 aa18.72■□□□□ 0.59
RTCA-201ENST00000260563 PIGQQ9BRB3 760 aa18.72■□□□□ 0.59
RTCA-201ENST00000260563 VCX3BQ9H321 246 aa18.72■□□□□ 0.59
RTCA-201ENST00000260563 ANKRD19PQ9H560 264 aa18.72■□□□□ 0.59
RTCA-201ENST00000260563 PLSCR2Q9NRY7 297 aa18.72■□□□□ 0.59
RTCA-201ENST00000260563 RPS6KB2Q9UBS0 482 aa18.72■□□□□ 0.59
RTCA-201ENST00000260563 SLC7A7Q9UM01 511 aa18.72■□□□□ 0.59
RTCA-201ENST00000260563 A0A1B0GWA3 101 aa18.71■□□□□ 0.59
RTCA-201ENST00000260563 SUSD5O60279 629 aa18.71■□□□□ 0.59
RTCA-201ENST00000260563 ZIC3O60481 467 aa18.71■□□□□ 0.59
RTCA-201ENST00000260563 ZNF17P17021 662 aa18.71■□□□□ 0.59
RTCA-201ENST00000260563 HSF1Q00613 529 aa18.71■□□□□ 0.59
RTCA-201ENST00000260563 TLE1Q04724 770 aa18.71■□□□□ 0.59
RTCA-201ENST00000260563 FOXF1Q12946 379 aa18.71■□□□□ 0.59
RTCA-201ENST00000260563 LAPTM4AQ15012 233 aa18.71■□□□□ 0.59
RTCA-201ENST00000260563 DCST1Q5T197 706 aa18.71■□□□□ 0.59
RTCA-201ENST00000260563 ARHGAP11AQ6P4F7 1023 aa18.71■□□□□ 0.59
RTCA-201ENST00000260563 ZBTB49Q6ZSB9 765 aa18.71■□□□□ 0.59
RTCA-201ENST00000260563 STK32CQ86UX6 486 aa18.71■□□□□ 0.59
RTCA-201ENST00000260563 HS3ST5Q8IZT8 346 aa18.71■□□□□ 0.59
RTCA-201ENST00000260563 ST8SIA1Q92185 356 aa18.71■□□□□ 0.59
RTCA-201ENST00000260563 KLHL4Q9C0H6 718 aa18.71■□□□□ 0.59
RTCA-201ENST00000260563 COQ10BQ9H8M1 238 aa18.71■□□□□ 0.59
RTCA-201ENST00000260563 PDP1Q9P0J1 537 aaPredicted RBP18.71■□□□□ 0.59
RTCA-201ENST00000260563 TMCC3Q9ULS5 477 aa18.71■□□□□ 0.59
RTCA-201ENST00000260563 SLC6A5Q9Y345 797 aa18.71■□□□□ 0.59
RTCA-201ENST00000260563 MAGED1Q9Y5V3 778 aaPredicted RBP18.71■□□□□ 0.59
RTCA-201ENST00000260563 GTF3C1Q12789 2109 aa18.71■□□□□ 0.59
RTCA-201ENST00000260563 TRBV4-1A0A0J9YWV2 114 aa18.7■□□□□ 0.58
RTCA-201ENST00000260563 WISP2O76076 250 aa18.7■□□□□ 0.58
RTCA-201ENST00000260563 PRKCAP17252 672 aa18.7■□□□□ 0.58
RTCA-201ENST00000260563 VHLP40337 213 aa18.7■□□□□ 0.58
RTCA-201ENST00000260563 EIF1P41567 113 aaKnown RBP18.7■□□□□ 0.58
RTCA-201ENST00000260563 MICAQ29983 383 aa18.7■□□□□ 0.58
RTCA-201ENST00000260563 ALG10BQ5I7T1 473 aa18.7■□□□□ 0.58
RTCA-201ENST00000260563 ULK3Q6PHR2 472 aa18.7■□□□□ 0.58
RTCA-201ENST00000260563 TBPL2Q6SJ96 375 aa18.7■□□□□ 0.58
RTCA-201ENST00000260563 CBR4Q8N4T8 237 aa18.7■□□□□ 0.58
RTCA-201ENST00000260563 SLC7A13Q8TCU3 470 aa18.7■□□□□ 0.58
RTCA-201ENST00000260563 FUZQ9BT04 418 aa18.7■□□□□ 0.58
RTCA-201ENST00000260563 SELENONQ9NZV5 590 aa18.7■□□□□ 0.58
RTCA-201ENST00000260563 PRDM4Q9UKN5 801 aa18.7■□□□□ 0.58
RTCA-201ENST00000260563 MED12Q93074 2177 aa18.7■□□□□ 0.58
RTCA-201ENST00000260563 TNFSF12-TNFSF13A0A0A6YY99 330 aa18.69■□□□□ 0.58
RTCA-201ENST00000260563 A0A1B0GTH9 108 aa18.69■□□□□ 0.58
RTCA-201ENST00000260563 A0A1B0GVC2 190 aa18.69■□□□□ 0.58
RTCA-201ENST00000260563 C7orf72A4D263 438 aa18.69■□□□□ 0.58
RTCA-201ENST00000260563 SHISA8B8ZZ34 492 aa18.69■□□□□ 0.58
RTCA-201ENST00000260563 SOCS2O14508 198 aa18.69■□□□□ 0.58
RTCA-201ENST00000260563 AQP7O14520 342 aa18.69■□□□□ 0.58
RTCA-201ENST00000260563 CHP2O43745 196 aa18.69■□□□□ 0.58
RTCA-201ENST00000260563 CCNB2O95067 398 aa18.69■□□□□ 0.58
RTCA-201ENST00000260563 LYPD3O95274 346 aa18.69■□□□□ 0.58
RTCA-201ENST00000260563 OTUD3Q5T2D3 398 aaPredicted RBP18.69■□□□□ 0.58
RTCA-201ENST00000260563 PODNL1Q6PEZ8 512 aa18.69■□□□□ 0.58
RTCA-201ENST00000260563 GFRALQ6UXV0 394 aa18.69■□□□□ 0.58
RTCA-201ENST00000260563 NKAIN4Q8IVV8 208 aa18.69■□□□□ 0.58
RTCA-201ENST00000260563 GTPBP8Q8N3Z3 284 aaPredicted RBP18.69■□□□□ 0.58
RTCA-201ENST00000260563 ST6GALNAC3Q8NDV1 305 aa18.69■□□□□ 0.58
RTCA-201ENST00000260563 OR5M1Q8NGP8 315 aa18.69■□□□□ 0.58
RTCA-201ENST00000260563 RNF217Q8TC41 542 aa18.69■□□□□ 0.58
RTCA-201ENST00000260563 GIPC3Q8TF64 312 aa18.69■□□□□ 0.58
RTCA-201ENST00000260563 DNAJA4Q8WW22 397 aaPredicted RBP18.69■□□□□ 0.58
RTCA-201ENST00000260563 SLC38A4Q969I6 547 aa18.69■□□□□ 0.58
RTCA-201ENST00000260563 MRGPRX4Q96LA9 322 aa18.69■□□□□ 0.58
RTCA-201ENST00000260563 SLC29A1Q99808 456 aa18.69■□□□□ 0.58
RTCA-201ENST00000260563 PRSS27Q9BQR3 290 aa18.69■□□□□ 0.58
RTCA-201ENST00000260563 GABARAPL1Q9H0R8 117 aa18.69■□□□□ 0.58
RTCA-201ENST00000260563 CFAP46Q8IYW2 2715 aa18.69■□□□□ 0.58
RTCA-201ENST00000260563 OR2M5A3KFT3 312 aa18.69■□□□□ 0.58
RTCA-201ENST00000260563 GP1BBP13224 206 aa18.69■□□□□ 0.58
RTCA-201ENST00000260563 ADH6P28332 368 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms