RNA–Protein interactions for RNA: ENST00000257909.7

TROAP-201, Transcript of trophinin associated protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TROAP, Length 2,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-201ENST00000257909 ART1P52961 327 aa10.64□□□□□ -0.71
TROAP-201ENST00000257909 H2BFSP57053 126 aa10.64□□□□□ -0.71
TROAP-201ENST00000257909 FOXK2Q01167 660 aa10.64□□□□□ -0.71
TROAP-201ENST00000257909 ILF3Q12906 894 aaKnown RBP eCLIP10.64□□□□□ -0.71
TROAP-201ENST00000257909 CDK5R1Q15078 307 aa10.64□□□□□ -0.71
TROAP-201ENST00000257909 FAM46CQ5VWP2 391 aa10.64□□□□□ -0.71
TROAP-201ENST00000257909 CCDC36Q8IYA8 594 aa10.64□□□□□ -0.71
TROAP-201ENST00000257909 C2orf73Q8N5S3 287 aaPredicted RBP10.64□□□□□ -0.71
TROAP-201ENST00000257909 OR5M1Q8NGP8 315 aa10.64□□□□□ -0.71
TROAP-201ENST00000257909 HMGB4Q8WW32 186 aa10.64□□□□□ -0.71
TROAP-201ENST00000257909 RAB40AQ8WXH6 277 aa10.64□□□□□ -0.71
TROAP-201ENST00000257909 C16orf58Q96GQ5 468 aa10.64□□□□□ -0.71
TROAP-201ENST00000257909 DERL3Q96Q80 235 aa10.64□□□□□ -0.71
TROAP-201ENST00000257909 OR1F2PQ96R84 312 aa10.64□□□□□ -0.71
TROAP-201ENST00000257909 SMAD5Q99717 465 aaKnown RBP10.64□□□□□ -0.71
TROAP-201ENST00000257909 DPH1Q9BZG8 443 aa10.64□□□□□ -0.71
TROAP-201ENST00000257909 TAC3Q9UHF0 121 aa10.64□□□□□ -0.71
TROAP-201ENST00000257909 MRTO4Q9UKD2 239 aaKnown RBP10.64□□□□□ -0.71
TROAP-201ENST00000257909 SLC35A3Q9Y2D2 325 aa10.64□□□□□ -0.71
TROAP-201ENST00000257909 THSD7BQ9C0I4 1608 aa10.64□□□□□ -0.71
TROAP-201ENST00000257909 C17orf113A0A1B0GUU1 675 aa10.63□□□□□ -0.71
TROAP-201ENST00000257909 IFITM5A6NNB3 132 aa10.63□□□□□ -0.71
TROAP-201ENST00000257909 RIIAD1A6NNX1 92 aa10.63□□□□□ -0.71
TROAP-201ENST00000257909 LILRB5O75023 590 aa10.63□□□□□ -0.71
TROAP-201ENST00000257909 ADAM11O75078 769 aa10.63□□□□□ -0.71
TROAP-201ENST00000257909 PCDH8O95206 1070 aa10.63□□□□□ -0.71
TROAP-201ENST00000257909 RLN2P04090 185 aa10.63□□□□□ -0.71
TROAP-201ENST00000257909 ZNF35P13682 527 aa10.63□□□□□ -0.71
TROAP-201ENST00000257909 TIMP2P16035 220 aa10.63□□□□□ -0.71
TROAP-201ENST00000257909 MGMTP16455 207 aa10.63□□□□□ -0.71
TROAP-201ENST00000257909 FXYD6P3P58550 94 aa10.63□□□□□ -0.71
TROAP-201ENST00000257909 ACTA2P62736 377 aa10.63□□□□□ -0.71
TROAP-201ENST00000257909 ACTG2P63267 376 aa10.63□□□□□ -0.71
TROAP-201ENST00000257909 REEP5Q00765 189 aa10.63□□□□□ -0.71
TROAP-201ENST00000257909 RBMS2Q15434 407 aaKnown RBP10.63□□□□□ -0.71
TROAP-201ENST00000257909 IGSF11Q5DX21 431 aa10.63□□□□□ -0.71
TROAP-201ENST00000257909 TMEM69Q5SWH9 247 aa10.63□□□□□ -0.71
TROAP-201ENST00000257909 LRRN1Q6UXK5 716 aa10.63□□□□□ -0.71
TROAP-201ENST00000257909 DPPA4Q7L190 304 aa10.63□□□□□ -0.71
TROAP-201ENST00000257909 UBE3DQ7Z6J8 389 aa10.63□□□□□ -0.71
TROAP-201ENST00000257909 NRSN1Q8IZ57 195 aa10.63□□□□□ -0.71
TROAP-201ENST00000257909 RNF113BQ8IZP6 322 aaKnown RBP10.63□□□□□ -0.71
TROAP-201ENST00000257909 SYS1Q8N2H4 156 aa10.63□□□□□ -0.71
TROAP-201ENST00000257909 OR2AK2Q8NG84 335 aa10.63□□□□□ -0.71
TROAP-201ENST00000257909 C1orf216Q8TAB5 229 aa10.63□□□□□ -0.71
TROAP-201ENST00000257909 NSMAFQ92636 917 aa10.63□□□□□ -0.71
TROAP-201ENST00000257909 SLC25A38Q96DW6 304 aa10.63□□□□□ -0.71
TROAP-201ENST00000257909 RSPH9Q9H1X1 276 aaPredicted RBP10.63□□□□□ -0.71
TROAP-201ENST00000257909 CACYBPQ9HB71 228 aaKnown RBP10.63□□□□□ -0.71
TROAP-201ENST00000257909 RASL12Q9NYN1 266 aa10.63□□□□□ -0.71
TROAP-201ENST00000257909 ASF1AQ9Y294 204 aa10.63□□□□□ -0.71
TROAP-201ENST00000257909 EMC8O43402 210 aa10.63□□□□□ -0.71
TROAP-201ENST00000257909 ERAL1O75616 437 aaKnown RBP10.63□□□□□ -0.71
TROAP-201ENST00000257909 SRMP19623 302 aa10.63□□□□□ -0.71
TROAP-201ENST00000257909 SLC2A5P22732 501 aa10.63□□□□□ -0.71
TROAP-201ENST00000257909 DPP4P27487 766 aa10.63□□□□□ -0.71
TROAP-201ENST00000257909 MNDAP41218 407 aa10.63□□□□□ -0.71
TROAP-201ENST00000257909 SSR2P43308 183 aa10.63□□□□□ -0.71
TROAP-201ENST00000257909 P2RX1P51575 399 aa10.63□□□□□ -0.71
TROAP-201ENST00000257909 RAB11FIP2Q7L804 512 aa10.63□□□□□ -0.71
TROAP-201ENST00000257909 SLC36A1Q7Z2H8 476 aa10.63□□□□□ -0.71
TROAP-201ENST00000257909 CMTM8Q8IZV2 173 aa10.63□□□□□ -0.71
TROAP-201ENST00000257909 BPIFCQ8NFQ6 507 aa10.63□□□□□ -0.71
TROAP-201ENST00000257909 OR52B4Q8NGK2 314 aa10.63□□□□□ -0.71
TROAP-201ENST00000257909 OR8K3Q8NH51 312 aa10.63□□□□□ -0.71
TROAP-201ENST00000257909 OR14A2Q96R54 314 aa10.63□□□□□ -0.71
TROAP-201ENST00000257909 ZDHHC5Q9C0B5 715 aa10.63□□□□□ -0.71
TROAP-201ENST00000257909 FANCFQ9NPI8 374 aa10.63□□□□□ -0.71
TROAP-201ENST00000257909 COA4Q9NYJ1 87 aa10.63□□□□□ -0.71
TROAP-201ENST00000257909 FOXJ3Q9UPW0 622 aa10.63□□□□□ -0.71
TROAP-201ENST00000257909 FEZF1A0PJY2 475 aa10.62□□□□□ -0.71
TROAP-201ENST00000257909 TSPAN11A1L157 253 aa10.62□□□□□ -0.71
TROAP-201ENST00000257909 PYCARD-AS1I3L0S3 204 aa10.62□□□□□ -0.71
TROAP-201ENST00000257909 LEFTY1O75610 366 aa10.62□□□□□ -0.71
TROAP-201ENST00000257909 ELFN1P0C7U0 828 aa10.62□□□□□ -0.71
TROAP-201ENST00000257909 MST1P26927 711 aa10.62□□□□□ -0.71
TROAP-201ENST00000257909 DCTDP32321 178 aa10.62□□□□□ -0.71
TROAP-201ENST00000257909 RAB13P51153 203 aa10.62□□□□□ -0.71
TROAP-201ENST00000257909 RPS11P62280 158 aaKnown RBP eCLIP10.62□□□□□ -0.71
TROAP-201ENST00000257909 ERVK-25P63136 954 aa10.62□□□□□ -0.71
TROAP-201ENST00000257909 SIRPAP78324 504 aa10.62□□□□□ -0.71
TROAP-201ENST00000257909 ZNF805Q5CZA5 627 aa10.62□□□□□ -0.71
TROAP-201ENST00000257909 C9orf64Q5T6V5 341 aa10.62□□□□□ -0.71
TROAP-201ENST00000257909 HES5Q5TA89 166 aa10.62□□□□□ -0.71
TROAP-201ENST00000257909 FAAP20Q6NZ36 180 aa10.62□□□□□ -0.71
TROAP-201ENST00000257909 RPL22L1Q6P5R6 122 aaKnown RBP10.62□□□□□ -0.71
TROAP-201ENST00000257909 TSSK4Q6SA08 328 aa10.62□□□□□ -0.71
TROAP-201ENST00000257909 UQCC3Q6UW78 93 aa10.62□□□□□ -0.71
TROAP-201ENST00000257909 UNQ9370/PRO34162Q6UXP9 181 aa10.62□□□□□ -0.71
TROAP-201ENST00000257909 FCRLAQ7L513 359 aa10.62□□□□□ -0.71
TROAP-201ENST00000257909 IFNL1Q8IU54 200 aa10.62□□□□□ -0.71
TROAP-201ENST00000257909 AMER3Q8N944 861 aa10.62□□□□□ -0.71
TROAP-201ENST00000257909 PCBD2Q9H0N5 130 aa10.62□□□□□ -0.71
TROAP-201ENST00000257909 BIN3Q9NQY0 253 aa10.62□□□□□ -0.71
TROAP-201ENST00000257909 SPG21Q9NZD8 308 aa10.62□□□□□ -0.71
TROAP-201ENST00000257909 LRFN2Q9ULH4 789 aa10.62□□□□□ -0.71
TROAP-201ENST00000257909 PLAGL1Q9UM63 463 aa10.62□□□□□ -0.71
TROAP-201ENST00000257909 COL4A3Q01955 1670 aa10.62□□□□□ -0.71
TROAP-201ENST00000257909 DENND4CQ5VZ89 1909 aa10.62□□□□□ -0.71
TROAP-201ENST00000257909 KIAA1549LQ6ZVL6 1849 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms