RNA–Protein interactions for RNA: ENST00000249064.8

CCDC117-201, Transcript of coiled-coil domain containing 117, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC117, Length 3,985 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC117-201ENST00000249064 PLA2G12AQ9BZM1 189 aa12.38□□□□□ -0.43
CCDC117-201ENST00000249064 KIF25Q9UIL4 384 aa12.38□□□□□ -0.43
CCDC117-201ENST00000249064 ATXN7L1Q9ULK2 861 aaPredicted RBP12.38□□□□□ -0.43
CCDC117-201ENST00000249064 UBL3O95164 117 aa12.37□□□□□ -0.43
CCDC117-201ENST00000249064 NDUFV2P19404 249 aa12.37□□□□□ -0.43
CCDC117-201ENST00000249064 CSF2RBP32927 897 aa12.37□□□□□ -0.43
CCDC117-201ENST00000249064 POLR2GP62487 172 aaKnown RBP eCLIP12.37□□□□□ -0.43
CCDC117-201ENST00000249064 SP140Q13342 867 aa12.37□□□□□ -0.43
CCDC117-201ENST00000249064 ZXDCQ2QGD7 858 aaPredicted RBP12.37□□□□□ -0.43
CCDC117-201ENST00000249064 TCEAL5Q5H9L2 206 aa12.37□□□□□ -0.43
CCDC117-201ENST00000249064 OR8J2Q8NGG1 315 aa12.37□□□□□ -0.43
CCDC117-201ENST00000249064 ZNF296Q8WUU4 475 aaPredicted RBP12.37□□□□□ -0.43
CCDC117-201ENST00000249064 CCDC107Q8WV48 283 aa12.37□□□□□ -0.43
CCDC117-201ENST00000249064 MRPL48Q96GC5 212 aaKnown RBP12.37□□□□□ -0.43
CCDC117-201ENST00000249064 LURAP1Q96LR2 239 aa12.37□□□□□ -0.43
CCDC117-201ENST00000249064 S100A13Q99584 98 aa12.37□□□□□ -0.43
CCDC117-201ENST00000249064 VRK1Q99986 396 aaPredicted RBP12.37□□□□□ -0.43
CCDC117-201ENST00000249064 MEPEQ9NQ76 525 aaPredicted RBP12.37□□□□□ -0.43
CCDC117-201ENST00000249064 TSC2P49815 1807 aa12.37□□□□□ -0.43
CCDC117-201ENST00000249064 NTN1O95631 604 aa12.37□□□□□ -0.43
CCDC117-201ENST00000249064 PPM1AP35813 382 aa12.37□□□□□ -0.43
CCDC117-201ENST00000249064 ID2Q02363 134 aa12.37□□□□□ -0.43
CCDC117-201ENST00000249064 GSG1Q2KHT4 349 aa12.37□□□□□ -0.43
CCDC117-201ENST00000249064 ARTNQ5T4W7 220 aa12.37□□□□□ -0.43
CCDC117-201ENST00000249064 CYB5R2Q6BCY4 276 aa12.37□□□□□ -0.43
CCDC117-201ENST00000249064 PSRC1Q6PGN9 363 aaPredicted RBP12.37□□□□□ -0.43
CCDC117-201ENST00000249064 FAM122BQ7Z309 247 aa12.37□□□□□ -0.43
CCDC117-201ENST00000249064 TMEM150AQ86TG1 271 aa12.37□□□□□ -0.43
CCDC117-201ENST00000249064 CD163Q86VB7 1156 aa12.37□□□□□ -0.43
CCDC117-201ENST00000249064 BVESQ8NE79 360 aa12.37□□□□□ -0.43
CCDC117-201ENST00000249064 NSMAFQ92636 917 aa12.37□□□□□ -0.43
CCDC117-201ENST00000249064 ATOH1Q92858 354 aaPredicted RBP12.37□□□□□ -0.43
CCDC117-201ENST00000249064 NKX3-1Q99801 234 aaPredicted RBP12.37□□□□□ -0.43
CCDC117-201ENST00000249064 MED18Q9BUE0 208 aa12.37□□□□□ -0.43
CCDC117-201ENST00000249064 POLDIP3Q9BY77 421 aaKnown RBP12.37□□□□□ -0.43
CCDC117-201ENST00000249064 PPP1R3EQ9H7J1 279 aa12.37□□□□□ -0.43
CCDC117-201ENST00000249064 METTL8Q9H825 291 aaKnown RBP12.37□□□□□ -0.43
CCDC117-201ENST00000249064 HCFC2Q9Y5Z7 792 aa12.37□□□□□ -0.43
CCDC117-201ENST00000249064 MEIKINA0A087WXM9 373 aa12.37□□□□□ -0.43
CCDC117-201ENST00000249064 RPS10-NUDT3A0A1W2PQS6 291 aa12.37□□□□□ -0.43
CCDC117-201ENST00000249064 HIDE1A8MVS5 230 aa12.37□□□□□ -0.43
CCDC117-201ENST00000249064 CACNB4O00305 520 aaPredicted RBP12.37□□□□□ -0.43
CCDC117-201ENST00000249064 ERI3O43414 337 aaKnown RBP12.37□□□□□ -0.43
CCDC117-201ENST00000249064 OR6A2O95222 327 aa12.37□□□□□ -0.43
CCDC117-201ENST00000249064 C6P13671 934 aa12.37□□□□□ -0.43
CCDC117-201ENST00000249064 IL1RNP18510 177 aa12.37□□□□□ -0.43
CCDC117-201ENST00000249064 RPS10P46783 165 aaKnown RBP12.37□□□□□ -0.43
CCDC117-201ENST00000249064 PNLIPRP1P54315 467 aa12.37□□□□□ -0.43
CCDC117-201ENST00000249064 SNRPGP62308 76 aaKnown RBP12.37□□□□□ -0.43
CCDC117-201ENST00000249064 PARS2Q7L3T8 475 aaKnown RBP12.37□□□□□ -0.43
CCDC117-201ENST00000249064 OAFQ86UD1 273 aa12.37□□□□□ -0.43
CCDC117-201ENST00000249064 TRAM1L1Q8N609 369 aa12.37□□□□□ -0.43
CCDC117-201ENST00000249064 OR4Q3Q8NH05 313 aa12.37□□□□□ -0.43
CCDC117-201ENST00000249064 OR10G6Q8NH81 332 aa12.37□□□□□ -0.43
CCDC117-201ENST00000249064 BRIX1Q8TDN6 353 aaKnown RBP12.37□□□□□ -0.43
CCDC117-201ENST00000249064 SMPDL3AQ92484 453 aa12.37□□□□□ -0.43
CCDC117-201ENST00000249064 MS4A3Q96HJ5 214 aa12.37□□□□□ -0.43
CCDC117-201ENST00000249064 DERL3Q96Q80 235 aa12.37□□□□□ -0.43
CCDC117-201ENST00000249064 IL21Q9HBE4 155 aa12.37□□□□□ -0.43
CCDC117-201ENST00000249064 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.37□□□□□ -0.43
CCDC117-201ENST00000249064 TM7SF3Q9NS93 570 aa12.37□□□□□ -0.43
CCDC117-201ENST00000249064 USP36Q9P275 1121 aaKnown RBP12.37□□□□□ -0.43
CCDC117-201ENST00000249064 DPP7Q9UHL4 492 aa12.37□□□□□ -0.43
CCDC117-201ENST00000249064 NTNG1Q9Y2I2 539 aa12.37□□□□□ -0.43
CCDC117-201ENST00000249064 OR1A2Q9Y585 309 aa12.37□□□□□ -0.43
CCDC117-201ENST00000249064 PRAF2O60831 178 aa12.37□□□□□ -0.43
CCDC117-201ENST00000249064 UBXN7O94888 489 aa12.37□□□□□ -0.43
CCDC117-201ENST00000249064 SCGB1D2O95969 90 aa12.37□□□□□ -0.43
CCDC117-201ENST00000249064 DBIP07108 87 aaKnown RBP12.37□□□□□ -0.43
CCDC117-201ENST00000249064 ATP5A1P25705 553 aaKnown RBP12.37□□□□□ -0.43
CCDC117-201ENST00000249064 SGCGQ13326 291 aa12.37□□□□□ -0.43
CCDC117-201ENST00000249064 RBMS2Q15434 407 aaKnown RBP12.37□□□□□ -0.43
CCDC117-201ENST00000249064 HTR3DQ70Z44 454 aa12.37□□□□□ -0.43
CCDC117-201ENST00000249064 SFT2D1Q8WV19 159 aa12.37□□□□□ -0.43
CCDC117-201ENST00000249064 ZNF649Q9BS31 505 aa12.37□□□□□ -0.43
CCDC117-201ENST00000249064 PTDSS2Q9BVG9 487 aa12.37□□□□□ -0.43
CCDC117-201ENST00000249064 ATG5Q9H1Y0 275 aa12.37□□□□□ -0.43
CCDC117-201ENST00000249064 SYT4Q9H2B2 425 aa12.37□□□□□ -0.43
CCDC117-201ENST00000249064 CXorf36Q9H7Y0 433 aa12.37□□□□□ -0.43
CCDC117-201ENST00000249064 CA5BQ9Y2D0 317 aa12.37□□□□□ -0.43
CCDC117-201ENST00000249064 BET1O15155 118 aa12.36□□□□□ -0.43
CCDC117-201ENST00000249064 NMBP08949 121 aa12.36□□□□□ -0.43
CCDC117-201ENST00000249064 UBBP0CG47 229 aa12.36□□□□□ -0.43
CCDC117-201ENST00000249064 UBCP0CG48 685 aaKnown RBP12.36□□□□□ -0.43
CCDC117-201ENST00000249064 ZNF8P17098 575 aaPredicted RBP12.36□□□□□ -0.43
CCDC117-201ENST00000249064 CPT2P23786 658 aa12.36□□□□□ -0.43
CCDC117-201ENST00000249064 CCR2P41597 374 aa12.36□□□□□ -0.43
CCDC117-201ENST00000249064 HAAOP46952 286 aa12.36□□□□□ -0.43
CCDC117-201ENST00000249064 MINDY4Q4G0A6 757 aa12.36□□□□□ -0.43
CCDC117-201ENST00000249064 LHX8Q68G74 356 aa12.36□□□□□ -0.43
CCDC117-201ENST00000249064 ZNF529Q6P280 563 aa12.36□□□□□ -0.43
CCDC117-201ENST00000249064 OR4D9Q8NGE8 314 aa12.36□□□□□ -0.43
CCDC117-201ENST00000249064 ZNF559Q9BR84 538 aa12.36□□□□□ -0.43
CCDC117-201ENST00000249064 TANC1Q9C0D5 1861 aa12.36□□□□□ -0.43
CCDC117-201ENST00000249064 SEC16AO15027 2179 aa12.36□□□□□ -0.43
CCDC117-201ENST00000249064 SGK494L7N484 410 aa12.36□□□□□ -0.43
CCDC117-201ENST00000249064 ADRA2AP08913 450 aa12.36□□□□□ -0.43
CCDC117-201ENST00000249064 NME1P15531 152 aaKnown RBP12.36□□□□□ -0.43
CCDC117-201ENST00000249064 RBM34P42696 430 aaKnown RBP12.36□□□□□ -0.43
CCDC117-201ENST00000249064 SLC6A12P48065 614 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms