RNA–Protein interactions for RNA: ENST00000248121.6

SYNGR3-201, Transcript of synaptogyrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR3, Length 2,051 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-201ENST00000248121 CENPOQ9BU64 300 aa21.35■■□□□ 1.01
SYNGR3-201ENST00000248121 COPS7AQ9UBW8 275 aa21.35■■□□□ 1.01
SYNGR3-201ENST00000248121 OSGIN1Q9UJX0 560 aa21.35■■□□□ 1.01
SYNGR3-201ENST00000248121 SOCS6O14544 535 aa21.34■■□□□ 1.01
SYNGR3-201ENST00000248121 REM1O75628 298 aa21.34■■□□□ 1.01
SYNGR3-201ENST00000248121 MST1P26927 711 aa21.34■■□□□ 1.01
SYNGR3-201ENST00000248121 E2F1Q01094 437 aa21.34■■□□□ 1.01
SYNGR3-201ENST00000248121 ZNF362Q5T0B9 420 aaPredicted RBP21.34■■□□□ 1.01
SYNGR3-201ENST00000248121 ZNF517Q6ZMY9 492 aaPredicted RBP21.34■■□□□ 1.01
SYNGR3-201ENST00000248121 DNAJA4Q8WW22 397 aaPredicted RBP21.34■■□□□ 1.01
SYNGR3-201ENST00000248121 STRADBQ9C0K7 418 aa21.34■■□□□ 1.01
SYNGR3-201ENST00000248121 DCSTAMPQ9H295 470 aa21.34■■□□□ 1.01
SYNGR3-201ENST00000248121 ICAM5Q9UMF0 924 aa21.34■■□□□ 1.01
SYNGR3-201ENST00000248121 HCN1O60741 890 aa21.33■■□□□ 1.01
SYNGR3-201ENST00000248121 LRP3O75074 770 aa21.33■■□□□ 1.01
SYNGR3-201ENST00000248121 STK17BO94768 372 aa21.33■■□□□ 1.01
SYNGR3-201ENST00000248121 FOXK2Q01167 660 aa21.33■■□□□ 1.01
SYNGR3-201ENST00000248121 C16orf47Q6ZP98 133 aaPredicted RBP21.33■■□□□ 1.01
SYNGR3-201ENST00000248121 OAFQ86UD1 273 aa21.33■■□□□ 1.01
SYNGR3-201ENST00000248121 CHCHD6Q9BRQ6 235 aa21.33■■□□□ 1.01
SYNGR3-201ENST00000248121 IFT27Q9BW83 186 aa21.33■■□□□ 1.01
SYNGR3-201ENST00000248121 HCAR1Q9BXC0 346 aa21.33■■□□□ 1.01
SYNGR3-201ENST00000248121 SLIRPQ9GZT3 109 aaKnown RBP21.33■■□□□ 1.01
SYNGR3-201ENST00000248121 EXOSC3Q9NQT5 275 aaKnown RBP21.33■■□□□ 1.01
SYNGR3-201ENST00000248121 IGKV1D-42A0A075B6H8 117 aa21.33■■□□□ 1
SYNGR3-201ENST00000248121 LOC100506127A0A0U1RQW1 187 aa21.33■■□□□ 1
SYNGR3-201ENST00000248121 C17orf51A8MQB3 221 aa21.33■■□□□ 1
SYNGR3-201ENST00000248121 C9orf172C9J069 976 aa21.33■■□□□ 1
SYNGR3-201ENST00000248121 LRRN3E7EW58 273 aa21.33■■□□□ 1
SYNGR3-201ENST00000248121 MYL12BO14950 172 aa21.33■■□□□ 1
SYNGR3-201ENST00000248121 NADKO95544 446 aaPredicted RBP21.33■■□□□ 1
SYNGR3-201ENST00000248121 HTR1FP30939 366 aa21.33■■□□□ 1
SYNGR3-201ENST00000248121 UGT2B10P36537 528 aa21.33■■□□□ 1
SYNGR3-201ENST00000248121 COPZ1P61923 177 aa21.33■■□□□ 1
SYNGR3-201ENST00000248121 DCAF12Q5T6F0 453 aa21.33■■□□□ 1
SYNGR3-201ENST00000248121 HLA-DQA1Q5Y7H0 255 aa21.33■■□□□ 1
SYNGR3-201ENST00000248121 PLBD1Q6P4A8 553 aa21.33■■□□□ 1
SYNGR3-201ENST00000248121 CXXC5Q7LFL8 322 aaKnown RBP21.33■■□□□ 1
SYNGR3-201ENST00000248121 TIPARPQ7Z3E1 657 aaKnown RBP21.33■■□□□ 1
SYNGR3-201ENST00000248121 APCDD1LQ8NCL9 501 aa21.33■■□□□ 1
SYNGR3-201ENST00000248121 NFAM1Q8NET5 270 aaPredicted RBP21.33■■□□□ 1
SYNGR3-201ENST00000248121 OR4F15Q8NGB8 312 aa21.33■■□□□ 1
SYNGR3-201ENST00000248121 RFKQ969G6 155 aa21.33■■□□□ 1
SYNGR3-201ENST00000248121 LIN37Q96GY3 246 aaPredicted RBP21.33■■□□□ 1
SYNGR3-201ENST00000248121 LRFN5Q96NI6 719 aa21.33■■□□□ 1
SYNGR3-201ENST00000248121 MED20Q9H944 212 aa21.33■■□□□ 1
SYNGR3-201ENST00000248121 AKAP7Q9P0M2 348 aaPredicted RBP21.33■■□□□ 1
SYNGR3-201ENST00000248121 MRTO4Q9UKD2 239 aaKnown RBP21.33■■□□□ 1
SYNGR3-201ENST00000248121 SPAARA0A1B0GVQ0 90 aa21.32■■□□□ 1
SYNGR3-201ENST00000248121 ZNF264O43296 627 aa21.32■■□□□ 1
SYNGR3-201ENST00000248121 KLF7O75840 302 aaPredicted RBP21.32■■□□□ 1
SYNGR3-201ENST00000248121 KLK3P07288 261 aaPredicted RBP21.32■■□□□ 1
SYNGR3-201ENST00000248121 UMODP07911 640 aa21.32■■□□□ 1
SYNGR3-201ENST00000248121 LIMS3P0CW19 117 aa21.32■■□□□ 1
SYNGR3-201ENST00000248121 LIMS4P0CW20 117 aa21.32■■□□□ 1
SYNGR3-201ENST00000248121 OR2G6Q5TZ20 316 aa21.32■■□□□ 1
SYNGR3-201ENST00000248121 SLC29A4Q7RTT9 530 aa21.32■■□□□ 1
SYNGR3-201ENST00000248121 LRRC17Q8N6Y2 441 aa21.32■■□□□ 1
SYNGR3-201ENST00000248121 ZNF649Q9BS31 505 aa21.32■■□□□ 1
SYNGR3-201ENST00000248121 PLGRKTQ9HBL7 147 aa21.32■■□□□ 1
SYNGR3-201ENST00000248121 CMC2Q9NRP2 79 aa21.32■■□□□ 1
SYNGR3-201ENST00000248121 FOXJ2Q9P0K8 574 aa21.32■■□□□ 1
SYNGR3-201ENST00000248121 EXPH5Q8NEV8 1989 aa21.32■■□□□ 1
SYNGR3-201ENST00000248121 KNTC1P50748 2209 aa21.32■■□□□ 1
SYNGR3-201ENST00000248121 IRGMA1A4Y4 181 aa21.32■■□□□ 1
SYNGR3-201ENST00000248121 SAGE2PA6NJ88 616 aa21.32■■□□□ 1
SYNGR3-201ENST00000248121 OR6C76A6NM76 312 aa21.32■■□□□ 1
SYNGR3-201ENST00000248121 JMJD7P0C870 316 aa21.32■■□□□ 1
SYNGR3-201ENST00000248121 ABCD3P28288 659 aa21.32■■□□□ 1
SYNGR3-201ENST00000248121 CD79BP40259 229 aa21.32■■□□□ 1
SYNGR3-201ENST00000248121 OPRL1P41146 370 aa21.32■■□□□ 1
SYNGR3-201ENST00000248121 RPS3AP61247 264 aaKnown RBP21.32■■□□□ 1
SYNGR3-201ENST00000248121 DGUOKQ16854 277 aa21.32■■□□□ 1
SYNGR3-201ENST00000248121 TMEM44Q2T9K0 475 aa21.32■■□□□ 1
SYNGR3-201ENST00000248121 FCRLBQ6BAA4 426 aa21.32■■□□□ 1
SYNGR3-201ENST00000248121 PAPD4Q6PIY7 484 aaKnown RBP21.32■■□□□ 1
SYNGR3-201ENST00000248121 OMA1Q96E52 524 aa21.32■■□□□ 1
SYNGR3-201ENST00000248121 FN3KQ9H479 309 aa21.32■■□□□ 1
SYNGR3-201ENST00000248121 EXOGQ9Y2C4 368 aaKnown RBP21.32■■□□□ 1
SYNGR3-201ENST00000248121 PCDHGA1Q9Y5H4 931 aa21.32■■□□□ 1
SYNGR3-201ENST00000248121 PCNX3Q9H6A9 2034 aa21.31■■□□□ 1
SYNGR3-201ENST00000248121 GPX5O75715 221 aa21.31■■□□□ 1
SYNGR3-201ENST00000248121 PPP1R3DO95685 299 aa21.31■■□□□ 1
SYNGR3-201ENST00000248121 ENDOUP21128 410 aaKnown RBP21.31■■□□□ 1
SYNGR3-201ENST00000248121 IL12BP29460 328 aa21.31■■□□□ 1
SYNGR3-201ENST00000248121 CCR4P51679 360 aa21.31■■□□□ 1
SYNGR3-201ENST00000248121 PLCXD2Q0VAA5 305 aa21.31■■□□□ 1
SYNGR3-201ENST00000248121 MLLT11Q13015 90 aaPredicted RBP21.31■■□□□ 1
SYNGR3-201ENST00000248121 WBP2NLQ6ICG8 309 aa21.31■■□□□ 1
SYNGR3-201ENST00000248121 NIPAL3Q6P499 406 aa21.31■■□□□ 1
SYNGR3-201ENST00000248121 TMEM205Q6UW68 189 aa21.31■■□□□ 1
SYNGR3-201ENST00000248121 B3GLCTQ6Y288 498 aa21.31■■□□□ 1
SYNGR3-201ENST00000248121 ATG4DQ86TL0 474 aaPredicted RBP21.31■■□□□ 1
SYNGR3-201ENST00000248121 METTL21AQ8WXB1 218 aa21.31■■□□□ 1
SYNGR3-201ENST00000248121 PTP4A1Q93096 173 aa21.31■■□□□ 1
SYNGR3-201ENST00000248121 VMP1Q96GC9 406 aa21.31■■□□□ 1
SYNGR3-201ENST00000248121 ZFHX2Q9C0A1 2572 aaPredicted RBP21.31■■□□□ 1
SYNGR3-201ENST00000248121 CORINQ9Y5Q5 1042 aa21.31■■□□□ 1
SYNGR3-201ENST00000248121 TMEM129A0AVI4 362 aa21.3■■□□□ 1
SYNGR3-201ENST00000248121 ZC3H12DA2A288 527 aaKnown RBP21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms