RNA–Protein interactions for RNA: ENST00000243056.4

HOXC13-201, Transcript of homeobox C13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC13, Length 2,423 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13-201ENST00000243056 ATP1B2P14415 290 aaPredicted RBP18.4■□□□□ 0.54
HOXC13-201ENST00000243056 MPGP29372 298 aa18.4■□□□□ 0.54
HOXC13-201ENST00000243056 GCGRP47871 477 aa18.4■□□□□ 0.54
HOXC13-201ENST00000243056 PPP2CBP62714 309 aa18.4■□□□□ 0.54
HOXC13-201ENST00000243056 PPP2CAP67775 309 aa18.4■□□□□ 0.54
HOXC13-201ENST00000243056 SMCO1Q147U7 214 aa18.4■□□□□ 0.54
HOXC13-201ENST00000243056 MLF2Q15773 248 aaPredicted RBP18.4■□□□□ 0.54
HOXC13-201ENST00000243056 CPSF6Q16630 551 aaKnown RBP eCLIP18.4■□□□□ 0.54
HOXC13-201ENST00000243056 RNF212Q495C1 297 aa18.4■□□□□ 0.54
HOXC13-201ENST00000243056 TBC1D3GQ6DHY5 549 aa18.4■□□□□ 0.54
HOXC13-201ENST00000243056 TBC1D3CQ6IPX1 549 aa18.4■□□□□ 0.54
HOXC13-201ENST00000243056 PGAP1Q75T13 922 aa18.4■□□□□ 0.54
HOXC13-201ENST00000243056 TBC1D3Q8IZP1 549 aaPredicted RBP18.4■□□□□ 0.54
HOXC13-201ENST00000243056 KLHL36Q8N4N3 616 aa18.4■□□□□ 0.54
HOXC13-201ENST00000243056 TRAM1L1Q8N609 369 aa18.4■□□□□ 0.54
HOXC13-201ENST00000243056 FAM71CQ8NEG0 241 aa18.4■□□□□ 0.54
HOXC13-201ENST00000243056 APOLD1Q96LR9 279 aa18.4■□□□□ 0.54
HOXC13-201ENST00000243056 ZFP3Q96NJ6 502 aa18.4■□□□□ 0.54
HOXC13-201ENST00000243056 FUZQ9BT04 418 aa18.4■□□□□ 0.54
HOXC13-201ENST00000243056 POLDIP3Q9BY77 421 aaKnown RBP18.4■□□□□ 0.54
HOXC13-201ENST00000243056 OR2AG1Q9H205 316 aa18.4■□□□□ 0.54
HOXC13-201ENST00000243056 MRPL15Q9P015 296 aaKnown RBP18.4■□□□□ 0.54
HOXC13-201ENST00000243056 DUX4Q9UBX2 424 aa18.4■□□□□ 0.54
HOXC13-201ENST00000243056 TRPS1Q9UHF7 1281 aa18.4■□□□□ 0.54
HOXC13-201ENST00000243056 CLEC4AQ9UMR7 237 aa18.4■□□□□ 0.54
HOXC13-201ENST00000243056 OR10H1Q9Y4A9 318 aa18.4■□□□□ 0.54
HOXC13-201ENST00000243056 ZNF106Q9H2Y7 1883 aaKnown RBP18.4■□□□□ 0.54
HOXC13-201ENST00000243056 A0A1B0GUH1 482 aa18.4■□□□□ 0.54
HOXC13-201ENST00000243056 ARRDC5A6NEK1 342 aa18.4■□□□□ 0.54
HOXC13-201ENST00000243056 CSF2RBP32927 897 aa18.4■□□□□ 0.54
HOXC13-201ENST00000243056 OR1F2PQ96R84 312 aa18.4■□□□□ 0.54
HOXC13-201ENST00000243056 DHRS7Q9Y394 339 aa18.4■□□□□ 0.54
HOXC13-201ENST00000243056 A0A1W2PPE3 182 aa18.39■□□□□ 0.53
HOXC13-201ENST00000243056 TERTO14746 1132 aaKnown RBP18.39■□□□□ 0.53
HOXC13-201ENST00000243056 ARPC1BO15143 372 aaKnown RBP18.39■□□□□ 0.53
HOXC13-201ENST00000243056 PIP5K1CO60331 668 aa18.39■□□□□ 0.53
HOXC13-201ENST00000243056 PRAF2O60831 178 aa18.39■□□□□ 0.53
HOXC13-201ENST00000243056 ADAP00813 363 aa18.39■□□□□ 0.53
HOXC13-201ENST00000243056 GP1BAP07359 652 aa18.39■□□□□ 0.53
HOXC13-201ENST00000243056 CNR1P21554 472 aa18.39■□□□□ 0.53
HOXC13-201ENST00000243056 OR10A3P58181 314 aa18.39■□□□□ 0.53
HOXC13-201ENST00000243056 OC90Q02509 493 aaPredicted RBP18.39■□□□□ 0.53
HOXC13-201ENST00000243056 TMEM115Q12893 351 aaPredicted RBP18.39■□□□□ 0.53
HOXC13-201ENST00000243056 TMEM52BQ4KMG9 183 aa18.39■□□□□ 0.53
HOXC13-201ENST00000243056 EOGTQ5NDL2 527 aa18.39■□□□□ 0.53
HOXC13-201ENST00000243056 MOB3CQ70IA8 216 aa18.39■□□□□ 0.53
HOXC13-201ENST00000243056 LHFPL3Q86UP9 236 aa18.39■□□□□ 0.53
HOXC13-201ENST00000243056 FAM26EQ8N5C1 309 aa18.39■□□□□ 0.53
HOXC13-201ENST00000243056 SKA2Q8WVK7 121 aaPredicted RBP18.39■□□□□ 0.53
HOXC13-201ENST00000243056 RNFT2Q96EX2 444 aa18.39■□□□□ 0.53
HOXC13-201ENST00000243056 LMAN1LQ9HAT1 526 aa18.39■□□□□ 0.53
HOXC13-201ENST00000243056 PPP1R14DQ9NXH3 145 aa18.39■□□□□ 0.53
HOXC13-201ENST00000243056 A0A1W2PQU0 124 aa18.39■□□□□ 0.53
HOXC13-201ENST00000243056 TSPAN6O43657 245 aa18.39■□□□□ 0.53
HOXC13-201ENST00000243056 SNAPC5O75971 98 aa18.39■□□□□ 0.53
HOXC13-201ENST00000243056 ADH1BP00325 375 aa18.39■□□□□ 0.53
HOXC13-201ENST00000243056 HPGDP15428 266 aa18.39■□□□□ 0.53
HOXC13-201ENST00000243056 GABRG2P18507 467 aa18.39■□□□□ 0.53
HOXC13-201ENST00000243056 ADPRHP54922 357 aa18.39■□□□□ 0.53
HOXC13-201ENST00000243056 COX20Q5RI15 118 aa18.39■□□□□ 0.53
HOXC13-201ENST00000243056 ZCCHC12Q6PEW1 402 aa18.39■□□□□ 0.53
HOXC13-201ENST00000243056 MBOAT1Q6ZNC8 495 aa18.39■□□□□ 0.53
HOXC13-201ENST00000243056 PRICKLE2Q7Z3G6 844 aa18.39■□□□□ 0.53
HOXC13-201ENST00000243056 RLN3Q8WXF3 142 aa18.39■□□□□ 0.53
HOXC13-201ENST00000243056 TCEAL7Q9BRU2 100 aa18.39■□□□□ 0.53
HOXC13-201ENST00000243056 AUNIPQ9H7T9 357 aa18.39■□□□□ 0.53
HOXC13-201ENST00000243056 ENPP4Q9Y6X5 453 aa18.39■□□□□ 0.53
HOXC13-201ENST00000243056 IGLV3-16A0A075B6K0 115 aa18.38■□□□□ 0.53
HOXC13-201ENST00000243056 C1orf226A1L170 272 aa18.38■□□□□ 0.53
HOXC13-201ENST00000243056 FFAR1O14842 300 aa18.38■□□□□ 0.53
HOXC13-201ENST00000243056 RAD1O60671 282 aa18.38■□□□□ 0.53
HOXC13-201ENST00000243056 ACHEP22303 614 aa18.38■□□□□ 0.53
HOXC13-201ENST00000243056 NOS3P29474 1203 aa18.38■□□□□ 0.53
HOXC13-201ENST00000243056 ZP2Q05996 745 aa18.38■□□□□ 0.53
HOXC13-201ENST00000243056 FABP9Q0Z7S8 132 aa18.38■□□□□ 0.53
HOXC13-201ENST00000243056 SSX9Q7RTT3 188 aa18.38■□□□□ 0.53
HOXC13-201ENST00000243056 NKAIN4Q8IVV8 208 aa18.38■□□□□ 0.53
HOXC13-201ENST00000243056 FAM160A2Q8N612 972 aaPredicted RBP18.38■□□□□ 0.53
HOXC13-201ENST00000243056 OR6K3Q8NGY3 331 aa18.38■□□□□ 0.53
HOXC13-201ENST00000243056 TRMT10AQ8TBZ6 339 aaKnown RBP18.38■□□□□ 0.53
HOXC13-201ENST00000243056 GSDMCQ9BYG8 508 aa18.38■□□□□ 0.53
HOXC13-201ENST00000243056 FGF20Q9NP95 211 aaPredicted RBP18.38■□□□□ 0.53
HOXC13-201ENST00000243056 NANSQ9NR45 359 aa18.38■□□□□ 0.53
HOXC13-201ENST00000243056 SLC2A4RGQ9NR83 387 aa18.38■□□□□ 0.53
HOXC13-201ENST00000243056 TM7SF3Q9NS93 570 aa18.38■□□□□ 0.53
HOXC13-201ENST00000243056 PCDHB1Q9Y5F3 818 aa18.38■□□□□ 0.53
HOXC13-201ENST00000243056 AP1M2Q9Y6Q5 423 aa18.38■□□□□ 0.53
HOXC13-201ENST00000243056 BDP1A6H8Y1 2624 aa18.38■□□□□ 0.53
HOXC13-201ENST00000243056 LAMP1P11279 417 aa18.38■□□□□ 0.53
HOXC13-201ENST00000243056 ETFAP13804 333 aa18.38■□□□□ 0.53
HOXC13-201ENST00000243056 NFYBP25208 207 aa18.38■□□□□ 0.53
HOXC13-201ENST00000243056 TEX30Q5JUR7 227 aa18.38■□□□□ 0.53
HOXC13-201ENST00000243056 SLC22A10Q63ZE4 541 aa18.38■□□□□ 0.53
HOXC13-201ENST00000243056 TMEM220Q6QAJ8 160 aa18.38■□□□□ 0.53
HOXC13-201ENST00000243056 GLDNQ6ZMI3 551 aaPredicted RBP18.38■□□□□ 0.53
HOXC13-201ENST00000243056 SKA3Q8IX90 412 aa18.38■□□□□ 0.53
HOXC13-201ENST00000243056 GEMIN6Q8WXD5 167 aaKnown RBP18.38■□□□□ 0.53
HOXC13-201ENST00000243056 RHOVQ96L33 236 aa18.38■□□□□ 0.53
HOXC13-201ENST00000243056 BBS4Q96RK4 519 aa18.38■□□□□ 0.53
HOXC13-201ENST00000243056 IFT27Q9BW83 186 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms