RNA–Protein interactions for RNA: ENST00000241704.7

COPA-201, Transcript of coatomer protein complex subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPA, Length 4,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-201ENST00000241704 PTNP21246 168 aa10.24□□□□□ -0.77
COPA-201ENST00000241704 HYAL1Q12794 435 aa10.24□□□□□ -0.77
COPA-201ENST00000241704 NLRC3Q7RTR2 1065 aa10.24□□□□□ -0.77
COPA-201ENST00000241704 SNIP1Q8TAD8 396 aaKnown RBP10.24□□□□□ -0.77
COPA-201ENST00000241704 GIMAP5Q96F15 307 aa10.24□□□□□ -0.77
COPA-201ENST00000241704 MS4A4EQ96PG1 132 aa10.24□□□□□ -0.77
COPA-201ENST00000241704 MACROD1Q9BQ69 325 aa10.24□□□□□ -0.77
COPA-201ENST00000241704 SEC22CQ9BRL7 303 aa10.24□□□□□ -0.77
COPA-201ENST00000241704 C1QTNF3Q9BXJ4 246 aa10.24□□□□□ -0.77
COPA-201ENST00000241704 LTBP1Q14766 1721 aa10.24□□□□□ -0.77
COPA-201ENST00000241704 NSG1A0A0A6YYJ2 146 aa10.23□□□□□ -0.77
COPA-201ENST00000241704 GFYI3L273 518 aa10.23□□□□□ -0.77
COPA-201ENST00000241704 SGK494L7N484 410 aa10.23□□□□□ -0.77
COPA-201ENST00000241704 LGALS8O00214 317 aa10.23□□□□□ -0.77
COPA-201ENST00000241704 LCMT2O60294 686 aaKnown RBP10.23□□□□□ -0.77
COPA-201ENST00000241704 SCRG1O75711 98 aa10.23□□□□□ -0.77
COPA-201ENST00000241704 SPDEFO95238 335 aa10.23□□□□□ -0.77
COPA-201ENST00000241704 OSMP13725 252 aa10.23□□□□□ -0.77
COPA-201ENST00000241704 PGAP1Q75T13 922 aa10.23□□□□□ -0.77
COPA-201ENST00000241704 LRRC28Q86X40 367 aaPredicted RBP10.23□□□□□ -0.77
COPA-201ENST00000241704 CDRT4Q8N9R6 151 aa10.23□□□□□ -0.77
COPA-201ENST00000241704 OR4D10Q8NGI6 311 aa10.23□□□□□ -0.77
COPA-201ENST00000241704 OR56B4Q8NH76 319 aa10.23□□□□□ -0.77
COPA-201ENST00000241704 TBC1D20Q96BZ9 403 aa10.23□□□□□ -0.77
COPA-201ENST00000241704 DNAJA3Q96EY1 480 aa10.23□□□□□ -0.77
COPA-201ENST00000241704 HS6ST2Q96MM7 605 aa10.23□□□□□ -0.77
COPA-201ENST00000241704 SECISBP2Q96T21 854 aaKnown RBP10.23□□□□□ -0.77
COPA-201ENST00000241704 PFDN5Q99471 154 aa10.23□□□□□ -0.77
COPA-201ENST00000241704 METTL21EPA6NDL7 271 aa10.23□□□□□ -0.77
COPA-201ENST00000241704 HMGN2P05204 90 aaKnown RBP10.23□□□□□ -0.77
COPA-201ENST00000241704 PPP3CBP16298 524 aa10.23□□□□□ -0.77
COPA-201ENST00000241704 RAP2BP61225 183 aa10.23□□□□□ -0.77
COPA-201ENST00000241704 ZNF79Q15937 498 aa10.23□□□□□ -0.77
COPA-201ENST00000241704 Q7L0L9 218 aa10.23□□□□□ -0.77
COPA-201ENST00000241704 GPR155Q7Z3F1 870 aa10.23□□□□□ -0.77
COPA-201ENST00000241704 NANPQ8TBE9 248 aa10.23□□□□□ -0.77
COPA-201ENST00000241704 FBLIM1Q8WUP2 373 aa10.23□□□□□ -0.77
COPA-201ENST00000241704 ADAD1Q96M93 576 aaKnown RBP10.23□□□□□ -0.77
COPA-201ENST00000241704 ZNF768Q9H5H4 540 aaKnown RBP10.23□□□□□ -0.77
COPA-201ENST00000241704 IKZF5Q9H5V7 419 aa10.23□□□□□ -0.77
COPA-201ENST00000241704 C6orf106Q9H6K1 298 aaPredicted RBP10.23□□□□□ -0.77
COPA-201ENST00000241704 NDUFB11Q9NX14 153 aa10.23□□□□□ -0.77
COPA-201ENST00000241704 ZFC3H1O60293 1989 aaKnown RBP10.23□□□□□ -0.77
COPA-201ENST00000241704 C17orf105B2RV13 164 aa10.23□□□□□ -0.77
COPA-201ENST00000241704 NPPBP16860 134 aa10.23□□□□□ -0.77
COPA-201ENST00000241704 ZNF14P17017 642 aaPredicted RBP10.23□□□□□ -0.77
COPA-201ENST00000241704 HK1P19367 917 aa10.23□□□□□ -0.77
COPA-201ENST00000241704 TNFRSF1BP20333 461 aa10.23□□□□□ -0.77
COPA-201ENST00000241704 MC3RP41968 323 aa10.23□□□□□ -0.77
COPA-201ENST00000241704 RNF144AP50876 292 aaPredicted RBP10.23□□□□□ -0.77
COPA-201ENST00000241704 YBX1P67809 324 aaKnown RBP10.23□□□□□ -0.77
COPA-201ENST00000241704 ZNF91Q05481 1191 aa10.23□□□□□ -0.77
COPA-201ENST00000241704 CHAF1BQ13112 559 aa10.23□□□□□ -0.77
COPA-201ENST00000241704 OR2T33Q8NG76 320 aa10.23□□□□□ -0.77
COPA-201ENST00000241704 OR1M1Q8NGA1 313 aa10.23□□□□□ -0.77
COPA-201ENST00000241704 OR8D4Q8NGM9 314 aa10.23□□□□□ -0.77
COPA-201ENST00000241704 TCTEX1D2Q8WW35 142 aa10.23□□□□□ -0.77
COPA-201ENST00000241704 UPRTQ96BW1 309 aa10.23□□□□□ -0.77
COPA-201ENST00000241704 LRR1Q96L50 414 aa10.23□□□□□ -0.77
COPA-201ENST00000241704 OR10A4Q9H209 315 aa10.23□□□□□ -0.77
COPA-201ENST00000241704 TCF7L1Q9HCS4 588 aa10.23□□□□□ -0.77
COPA-201ENST00000241704 ACSS1Q9NUB1 689 aaPredicted RBP10.23□□□□□ -0.77
COPA-201ENST00000241704 PLEKHA6Q9Y2H5 1048 aa10.23□□□□□ -0.77
COPA-201ENST00000241704 ANXA2P2A6NMY6 339 aa10.23□□□□□ -0.77
COPA-201ENST00000241704 OR2AT4A6NND4 320 aa10.23□□□□□ -0.77
COPA-201ENST00000241704 CHP2O43745 196 aa10.23□□□□□ -0.77
COPA-201ENST00000241704 FABP1P07148 127 aa10.23□□□□□ -0.77
COPA-201ENST00000241704 ANXA2P07355 339 aaKnown RBP10.23□□□□□ -0.77
COPA-201ENST00000241704 PRR35P0CG20 571 aa10.23□□□□□ -0.77
COPA-201ENST00000241704 PIPP12273 146 aaPredicted RBP10.23□□□□□ -0.77
COPA-201ENST00000241704 CDKN2CP42773 168 aa10.23□□□□□ -0.77
COPA-201ENST00000241704 HBA1P69905 142 aa10.23□□□□□ -0.77
COPA-201ENST00000241704 SRYQ05066 204 aa10.23□□□□□ -0.77
COPA-201ENST00000241704 CCSMST1Q4G0I0 132 aa10.23□□□□□ -0.77
COPA-201ENST00000241704 AVPI1Q5T686 147 aa10.23□□□□□ -0.77
COPA-201ENST00000241704 RPL13AP3Q6NVV1 102 aa10.23□□□□□ -0.77
COPA-201ENST00000241704 FAM160A2Q8N612 972 aaPredicted RBP10.23□□□□□ -0.77
COPA-201ENST00000241704 SYT14Q8NB59 555 aa10.23□□□□□ -0.77
COPA-201ENST00000241704 OR9A2Q8NGT5 310 aa10.23□□□□□ -0.77
COPA-201ENST00000241704 CCNL2Q96S94 520 aaPredicted RBP10.23□□□□□ -0.77
COPA-201ENST00000241704 WDR77Q9BQA1 342 aaPredicted RBP10.23□□□□□ -0.77
COPA-201ENST00000241704 POLDIP3Q9BY77 421 aaKnown RBP10.23□□□□□ -0.77
COPA-201ENST00000241704 NMNAT1Q9HAN9 279 aaPredicted RBP10.23□□□□□ -0.77
COPA-201ENST00000241704 NANSQ9NR45 359 aa10.23□□□□□ -0.77
COPA-201ENST00000241704 CYB5R1Q9UHQ9 305 aa10.23□□□□□ -0.77
COPA-201ENST00000241704 YBX2Q9Y2T7 364 aaKnown RBP10.23□□□□□ -0.77
COPA-201ENST00000241704 HS3ST3A1Q9Y663 406 aa10.23□□□□□ -0.77
COPA-201ENST00000241704 COL11A1P12107 1806 aaPredicted RBP10.22□□□□□ -0.77
COPA-201ENST00000241704 ASCC3Q8N3C0 2202 aaKnown RBP10.22□□□□□ -0.77
COPA-201ENST00000241704 C2orf92A0A1B0GVN3 265 aa10.22□□□□□ -0.77
COPA-201ENST00000241704 TMEM202A6NGA9 273 aa10.22□□□□□ -0.77
COPA-201ENST00000241704 D6RAR5 112 aa10.22□□□□□ -0.77
COPA-201ENST00000241704 PSMD9O00233 223 aa10.22□□□□□ -0.77
COPA-201ENST00000241704 DEFA6Q01524 100 aa10.22□□□□□ -0.77
COPA-201ENST00000241704 MRPL49Q13405 166 aaKnown RBP10.22□□□□□ -0.77
COPA-201ENST00000241704 METRNLQ641Q3 311 aa10.22□□□□□ -0.77
COPA-201ENST00000241704 SFRP4Q6FHJ7 346 aaPredicted RBP10.22□□□□□ -0.77
COPA-201ENST00000241704 BAIAP2L2Q6UXY1 529 aa10.22□□□□□ -0.77
COPA-201ENST00000241704 ZNF740Q8NDX6 193 aa10.22□□□□□ -0.77
COPA-201ENST00000241704 TMEM185AQ8NFB2 350 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms