RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 RAB15P59190 212 aa21.29■■□□□ 1
MSX2-201ENST00000239243 INAQ16352 499 aa21.29■■□□□ 1
MSX2-201ENST00000239243 CBLN3Q6UW01 205 aa21.29■■□□□ 1
MSX2-201ENST00000239243 ACBD7Q8N6N7 88 aa21.29■■□□□ 1
MSX2-201ENST00000239243 SLC38A9Q8NBW4 561 aa21.29■■□□□ 1
MSX2-201ENST00000239243 ZNF485Q8NCK3 441 aa21.29■■□□□ 1
MSX2-201ENST00000239243 OMA1Q96E52 524 aa21.29■■□□□ 1
MSX2-201ENST00000239243 CDADC1Q9BWV3 514 aa21.29■■□□□ 1
MSX2-201ENST00000239243 C6orf62Q9GZU0 229 aaPredicted RBP21.29■■□□□ 1
MSX2-201ENST00000239243 KLHL21Q9UJP4 597 aa21.29■■□□□ 1
MSX2-201ENST00000239243 FBXO4Q9UKT5 387 aa21.29■■□□□ 1
MSX2-201ENST00000239243 LAMA1P25391 3075 aa21.28■■□□□ 1
MSX2-201ENST00000239243 CDC14CA4D256 554 aa21.28■■□□□ 1
MSX2-201ENST00000239243 IDSB3KWA1 339 aa21.28■■□□□ 1
MSX2-201ENST00000239243 ZNF670-ZNF695F2Z2N8 137 aa21.28■■□□□ 1
MSX2-201ENST00000239243 EIF4E2O60573 245 aaKnown RBP21.28■■□□□ 1
MSX2-201ENST00000239243 ABCD3P28288 659 aa21.28■■□□□ 1
MSX2-201ENST00000239243 PRPS1P60891 318 aa21.28■■□□□ 1
MSX2-201ENST00000239243 KLHL12Q53G59 568 aa21.28■■□□□ 1
MSX2-201ENST00000239243 TMPRSS11AQ6ZMR5 421 aa21.28■■□□□ 1
MSX2-201ENST00000239243 MFSD4AQ8N468 514 aa21.28■■□□□ 1
MSX2-201ENST00000239243 SIRT6Q8N6T7 355 aa21.28■■□□□ 1
MSX2-201ENST00000239243 ZNF563Q8TA94 476 aa21.28■■□□□ 1
MSX2-201ENST00000239243 METTL21AQ8WXB1 218 aa21.28■■□□□ 1
MSX2-201ENST00000239243 TM9SF4Q92544 642 aa21.28■■□□□ 1
MSX2-201ENST00000239243 PTP4A1Q93096 173 aa21.28■■□□□ 1
MSX2-201ENST00000239243 TP53INP1Q96A56 240 aa21.28■■□□□ 1
MSX2-201ENST00000239243 ERMAPQ96PL5 475 aaPredicted RBP21.28■■□□□ 1
MSX2-201ENST00000239243 GFM1Q96RP9 751 aaKnown RBP21.28■■□□□ 1
MSX2-201ENST00000239243 ASPNQ9BXN1 380 aa21.28■■□□□ 1
MSX2-201ENST00000239243 TBL1XR1Q9BZK7 514 aa21.28■■□□□ 1
MSX2-201ENST00000239243 MED20Q9H944 212 aa21.28■■□□□ 1
MSX2-201ENST00000239243 CAB39Q9Y376 341 aaPredicted RBP21.28■■□□□ 1
MSX2-201ENST00000239243 HEATR5AQ86XA9 2040 aa21.28■■□□□ 1
MSX2-201ENST00000239243 OIP5O43482 229 aa21.28■■□□□ 1
MSX2-201ENST00000239243 TIAF1O95411 115 aa21.28■■□□□ 1
MSX2-201ENST00000239243 BMP4P12644 408 aa21.28■■□□□ 1
MSX2-201ENST00000239243 RPS7P62081 194 aaKnown RBP21.28■■□□□ 1
MSX2-201ENST00000239243 CRMP1Q14194 572 aa21.28■■□□□ 1
MSX2-201ENST00000239243 ZNF362Q5T0B9 420 aaPredicted RBP21.28■■□□□ 1
MSX2-201ENST00000239243 FAAH2Q6GMR7 532 aa21.28■■□□□ 1
MSX2-201ENST00000239243 TUBA3EQ6PEY2 450 aa21.28■■□□□ 1
MSX2-201ENST00000239243 DPY19L2P2Q6ZN68 376 aa21.28■■□□□ 1
MSX2-201ENST00000239243 SHISA6Q6ZSJ9 500 aa21.28■■□□□ 1
MSX2-201ENST00000239243 OVCH1Q7RTY7 1134 aa21.28■■□□□ 1
MSX2-201ENST00000239243 ANKRD37Q7Z713 158 aa21.28■■□□□ 1
MSX2-201ENST00000239243 CHRNA9Q9UGM1 479 aa21.28■■□□□ 1
MSX2-201ENST00000239243 SLC30A4O14863 429 aa21.27■■□□□ 1
MSX2-201ENST00000239243 NDUFB5O43674 189 aa21.27■■□□□ 1
MSX2-201ENST00000239243 SYPP08247 313 aa21.27■■□□□ 1
MSX2-201ENST00000239243 GABRA5P31644 462 aa21.27■■□□□ 1
MSX2-201ENST00000239243 GRK6P43250 576 aa21.27■■□□□ 1
MSX2-201ENST00000239243 NRG3P56975 720 aa21.27■■□□□ 1
MSX2-201ENST00000239243 POU4F2Q12837 409 aa21.27■■□□□ 1
MSX2-201ENST00000239243 TRIM61Q5EBN2 209 aa21.27■■□□□ 1
MSX2-201ENST00000239243 SLC23A3Q6PIS1 610 aa21.27■■□□□ 1
MSX2-201ENST00000239243 LIPHQ8WWY8 451 aa21.27■■□□□ 1
MSX2-201ENST00000239243 TEAD3Q99594 435 aa21.27■■□□□ 1
MSX2-201ENST00000239243 ZNF649Q9BS31 505 aa21.27■■□□□ 1
MSX2-201ENST00000239243 SEMA4CQ9C0C4 833 aa21.27■■□□□ 1
MSX2-201ENST00000239243 HAO2Q9NYQ3 351 aa21.27■■□□□ 1
MSX2-201ENST00000239243 PEX16Q9Y5Y5 336 aa21.27■■□□□ 1
MSX2-201ENST00000239243 SAGE2PA6NJ88 616 aa21.27■□□□□ 0.99
MSX2-201ENST00000239243 WWP2O00308 870 aa21.27■□□□□ 0.99
MSX2-201ENST00000239243 ALOX12BO75342 701 aa21.27■□□□□ 0.99
MSX2-201ENST00000239243 PHF19Q5T6S3 580 aa21.27■□□□□ 0.99
MSX2-201ENST00000239243 NUP54Q7Z3B4 507 aa21.27■□□□□ 0.99
MSX2-201ENST00000239243 OR5M3Q8NGP4 307 aa21.27■□□□□ 0.99
MSX2-201ENST00000239243 KISS1RQ969F8 398 aaPredicted RBP21.27■□□□□ 0.99
MSX2-201ENST00000239243 HCAR1Q9BXC0 346 aa21.27■□□□□ 0.99
MSX2-201ENST00000239243 ADAMTS9Q9P2N4 1935 aa21.26■□□□□ 0.99
MSX2-201ENST00000239243 IGKV1D-42A0A075B6H8 117 aa21.26■□□□□ 0.99
MSX2-201ENST00000239243 HCRTR2O43614 444 aa21.26■□□□□ 0.99
MSX2-201ENST00000239243 RPS4XP62701 263 aaKnown RBP21.26■□□□□ 0.99
MSX2-201ENST00000239243 RNF4P78317 190 aa21.26■□□□□ 0.99
MSX2-201ENST00000239243 BDH1Q02338 343 aa21.26■□□□□ 0.99
MSX2-201ENST00000239243 ZNF117Q03924 483 aa21.26■□□□□ 0.99
MSX2-201ENST00000239243 ISXQ2M1V0 245 aa21.26■□□□□ 0.99
MSX2-201ENST00000239243 OR51V1Q9H2C8 321 aa21.26■□□□□ 0.99
MSX2-201ENST00000239243 C12orf71A8MTZ7 269 aa21.25■□□□□ 0.99
MSX2-201ENST00000239243 PATE3B3GLJ2 98 aa21.25■□□□□ 0.99
MSX2-201ENST00000239243 TAF4O00268 1085 aa21.25■□□□□ 0.99
MSX2-201ENST00000239243 IDH3BO43837 385 aa21.25■□□□□ 0.99
MSX2-201ENST00000239243 SLC2A5P22732 501 aa21.25■□□□□ 0.99
MSX2-201ENST00000239243 RPL4P36578 427 aaKnown RBP21.25■□□□□ 0.99
MSX2-201ENST00000239243 SLC16A1P53985 500 aa21.25■□□□□ 0.99
MSX2-201ENST00000239243 ZNF385CQ66K41 422 aaPredicted RBP21.25■□□□□ 0.99
MSX2-201ENST00000239243 FCRLBQ6BAA4 426 aa21.25■□□□□ 0.99
MSX2-201ENST00000239243 LSRQ86X29 649 aaPredicted RBP21.25■□□□□ 0.99
MSX2-201ENST00000239243 COQ7Q99807 217 aa21.25■□□□□ 0.99
MSX2-201ENST00000239243 NUAK2Q9H093 628 aa21.25■□□□□ 0.99
MSX2-201ENST00000239243 TXNL4BQ9NX01 149 aaKnown RBP21.25■□□□□ 0.99
MSX2-201ENST00000239243 LOC105378220A0A1B0GUY1 285 aaPredicted RBP21.25■□□□□ 0.99
MSX2-201ENST00000239243 CCDC182A6NF36 153 aa21.25■□□□□ 0.99
MSX2-201ENST00000239243 OR6C70A6NIJ9 312 aa21.25■□□□□ 0.99
MSX2-201ENST00000239243 ARPC3O15145 178 aa21.25■□□□□ 0.99
MSX2-201ENST00000239243 CYC1P08574 325 aa21.25■□□□□ 0.99
MSX2-201ENST00000239243 CD40LGP29965 261 aa21.25■□□□□ 0.99
MSX2-201ENST00000239243 TRA2AQ13595 282 aaKnown RBP eCLIP21.25■□□□□ 0.99
MSX2-201ENST00000239243 IL11RAQ14626 422 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms