RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 ARHGAP9Q9BRR9 750 aa12.05□□□□□ -0.48
VAMP4-201ENST00000236192 TMPRSS13Q9BYE2 586 aa12.05□□□□□ -0.48
VAMP4-201ENST00000236192 GDF2Q9UK05 429 aaPredicted RBP12.05□□□□□ -0.48
VAMP4-201ENST00000236192 CBLCQ9ULV8 474 aa12.05□□□□□ -0.48
VAMP4-201ENST00000236192 SMIM28A0A1B0GU29 152 aa12.04□□□□□ -0.48
VAMP4-201ENST00000236192 XKRYO14609 159 aa12.04□□□□□ -0.48
VAMP4-201ENST00000236192 ZNF623O75123 536 aa12.04□□□□□ -0.48
VAMP4-201ENST00000236192 OR12D1P0DN82 309 aa12.04□□□□□ -0.48
VAMP4-201ENST00000236192 GAAP10253 952 aa12.04□□□□□ -0.48
VAMP4-201ENST00000236192 NAA10P41227 235 aaPredicted RBP12.04□□□□□ -0.48
VAMP4-201ENST00000236192 ZNF41P51814 821 aaPredicted RBP12.04□□□□□ -0.48
VAMP4-201ENST00000236192 HFEQ30201 348 aa12.04□□□□□ -0.48
VAMP4-201ENST00000236192 RPS26P11Q5JNZ5 115 aaPredicted RBP12.04□□□□□ -0.48
VAMP4-201ENST00000236192 ELFN2Q5R3F8 820 aa12.04□□□□□ -0.48
VAMP4-201ENST00000236192 DCST2Q5T1A1 773 aa12.04□□□□□ -0.48
VAMP4-201ENST00000236192 TGIF2LXQ8IUE1 241 aa12.04□□□□□ -0.48
VAMP4-201ENST00000236192 BPIFB2Q8N4F0 458 aa12.04□□□□□ -0.48
VAMP4-201ENST00000236192 CD200R1Q8TD46 325 aa12.04□□□□□ -0.48
VAMP4-201ENST00000236192 TMEM18Q96B42 140 aa12.04□□□□□ -0.48
VAMP4-201ENST00000236192 KLRG1Q96E93 195 aa12.04□□□□□ -0.48
VAMP4-201ENST00000236192 MAP3K3Q99759 626 aa12.04□□□□□ -0.48
VAMP4-201ENST00000236192 TAPBPLQ9BX59 468 aa12.04□□□□□ -0.48
VAMP4-201ENST00000236192 IKZF5Q9H5V7 419 aa12.04□□□□□ -0.48
VAMP4-201ENST00000236192 TLR9Q9NR96 1032 aa12.04□□□□□ -0.48
VAMP4-201ENST00000236192 CHD1O14646 1710 aa12.04□□□□□ -0.48
VAMP4-201ENST00000236192 CICQ96RK0 1608 aaPredicted RBP12.04□□□□□ -0.48
VAMP4-201ENST00000236192 LOC390937A0A1W2PQ73 354 aa12.04□□□□□ -0.48
VAMP4-201ENST00000236192 LIPCP11150 499 aa12.04□□□□□ -0.48
VAMP4-201ENST00000236192 GUCA1AP43080 201 aaPredicted RBP12.04□□□□□ -0.48
VAMP4-201ENST00000236192 ZNF322Q6U7Q0 402 aaPredicted RBP12.04□□□□□ -0.48
VAMP4-201ENST00000236192 SUN3Q8TAQ9 357 aa12.04□□□□□ -0.48
VAMP4-201ENST00000236192 FBLIM1Q8WUP2 373 aa12.04□□□□□ -0.48
VAMP4-201ENST00000236192 SIRT7Q9NRC8 400 aa12.04□□□□□ -0.48
VAMP4-201ENST00000236192 DKKL1Q9UK85 242 aa12.04□□□□□ -0.48
VAMP4-201ENST00000236192 TAAR5O14804 337 aa12.04□□□□□ -0.48
VAMP4-201ENST00000236192 DBIP07108 87 aaKnown RBP12.04□□□□□ -0.48
VAMP4-201ENST00000236192 QDPRP09417 244 aa12.04□□□□□ -0.48
VAMP4-201ENST00000236192 MPPED2Q15777 294 aa12.04□□□□□ -0.48
VAMP4-201ENST00000236192 OR2A2Q6IF42 318 aa12.04□□□□□ -0.48
VAMP4-201ENST00000236192 OR4C5Q8NGB2 326 aa12.04□□□□□ -0.48
VAMP4-201ENST00000236192 OR5M1Q8NGP8 315 aa12.04□□□□□ -0.48
VAMP4-201ENST00000236192 BRI3BPQ8WY22 251 aa12.04□□□□□ -0.48
VAMP4-201ENST00000236192 MKKSQ9NPJ1 570 aaPredicted RBP12.04□□□□□ -0.48
VAMP4-201ENST00000236192 COA4Q9NYJ1 87 aa12.04□□□□□ -0.48
VAMP4-201ENST00000236192 METTL1Q9UBP6 276 aaKnown RBP12.04□□□□□ -0.48
VAMP4-201ENST00000236192 KCPQ6ZWJ8 1503 aa12.04□□□□□ -0.48
VAMP4-201ENST00000236192 DBX1A6NMT0 343 aa12.04□□□□□ -0.48
VAMP4-201ENST00000236192 PPM1DO15297 605 aa12.04□□□□□ -0.48
VAMP4-201ENST00000236192 DPM1O60762 260 aa12.04□□□□□ -0.48
VAMP4-201ENST00000236192 CLDN11O75508 207 aa12.04□□□□□ -0.48
VAMP4-201ENST00000236192 GBAP04062 536 aa12.04□□□□□ -0.48
VAMP4-201ENST00000236192 CDK3Q00526 305 aa12.04□□□□□ -0.48
VAMP4-201ENST00000236192 IRF3Q14653 427 aa12.04□□□□□ -0.48
VAMP4-201ENST00000236192 TEAD2Q15562 447 aa12.04□□□□□ -0.48
VAMP4-201ENST00000236192 LDLRAD3Q86YD5 345 aa12.04□□□□□ -0.48
VAMP4-201ENST00000236192 SDHCQ99643 169 aaPredicted RBP12.04□□□□□ -0.48
VAMP4-201ENST00000236192 CNIH4Q9P003 139 aa12.04□□□□□ -0.48
VAMP4-201ENST00000236192 FBXW2Q9UKT8 454 aa12.04□□□□□ -0.48
VAMP4-201ENST00000236192 ETV7Q9Y603 341 aa12.04□□□□□ -0.48
VAMP4-201ENST00000236192 A0A1W2PPH5 198 aa12.03□□□□□ -0.48
VAMP4-201ENST00000236192 YY2O15391 372 aa12.03□□□□□ -0.48
VAMP4-201ENST00000236192 SLC2A1P11166 492 aa12.03□□□□□ -0.48
VAMP4-201ENST00000236192 RIDAP52758 137 aaKnown RBP12.03□□□□□ -0.48
VAMP4-201ENST00000236192 ETV3LQ6ZN32 361 aa12.03□□□□□ -0.48
VAMP4-201ENST00000236192 CFAP52Q8N1V2 620 aa12.03□□□□□ -0.48
VAMP4-201ENST00000236192 FAM83CQ9BQN1 747 aa12.03□□□□□ -0.48
VAMP4-201ENST00000236192 SMIM3Q9BZL3 60 aa12.03□□□□□ -0.48
VAMP4-201ENST00000236192 LSM5Q9Y4Y9 91 aaKnown RBP12.03□□□□□ -0.48
VAMP4-201ENST00000236192 AGR2O95994 175 aa12.03□□□□□ -0.48
VAMP4-201ENST00000236192 ZNF286BP0CG31 522 aa12.03□□□□□ -0.48
VAMP4-201ENST00000236192 EPXP11678 715 aa12.03□□□□□ -0.48
VAMP4-201ENST00000236192 CSF2RAP15509 400 aa12.03□□□□□ -0.48
VAMP4-201ENST00000236192 CXADRP78310 365 aa12.03□□□□□ -0.48
VAMP4-201ENST00000236192 STEAP1BQ6NZ63 245 aa12.03□□□□□ -0.48
VAMP4-201ENST00000236192 PHYKPLQ8IUZ5 450 aa12.03□□□□□ -0.48
VAMP4-201ENST00000236192 SAMD8Q96LT4 415 aa12.03□□□□□ -0.48
VAMP4-201ENST00000236192 INTS14Q96SY0 518 aa12.03□□□□□ -0.48
VAMP4-201ENST00000236192 OR2AG1Q9H205 316 aa12.03□□□□□ -0.48
VAMP4-201ENST00000236192 ARRDC5A6NEK1 342 aa12.03□□□□□ -0.48
VAMP4-201ENST00000236192 ARL5CA6NH57 179 aa12.03□□□□□ -0.48
VAMP4-201ENST00000236192 GPR37L1O60883 481 aa12.03□□□□□ -0.48
VAMP4-201ENST00000236192 ACP5P13686 325 aa12.03□□□□□ -0.48
VAMP4-201ENST00000236192 ADRA1AP35348 466 aa12.03□□□□□ -0.48
VAMP4-201ENST00000236192 SLC14A2Q15849 920 aa12.03□□□□□ -0.48
VAMP4-201ENST00000236192 ZNF626Q68DY1 528 aa12.03□□□□□ -0.48
VAMP4-201ENST00000236192 LCTLQ6UWM7 567 aa12.03□□□□□ -0.48
VAMP4-201ENST00000236192 RASGEF1AQ8N9B8 481 aa12.03□□□□□ -0.48
VAMP4-201ENST00000236192 OR5AK2Q8NH90 309 aa12.03□□□□□ -0.48
VAMP4-201ENST00000236192 RELTQ969Z4 430 aa12.03□□□□□ -0.48
VAMP4-201ENST00000236192 KIRREL1Q96J84 757 aa12.03□□□□□ -0.48
VAMP4-201ENST00000236192 PCYT2Q99447 389 aa12.03□□□□□ -0.48
VAMP4-201ENST00000236192 GGACTQ9BVM4 153 aa12.03□□□□□ -0.48
VAMP4-201ENST00000236192 ACER3Q9NUN7 267 aa12.03□□□□□ -0.48
VAMP4-201ENST00000236192 NTMQ9P121 344 aa12.03□□□□□ -0.48
VAMP4-201ENST00000236192 IL17BQ9UHF5 180 aa12.03□□□□□ -0.48
VAMP4-201ENST00000236192 HS3ST4Q9Y661 456 aa12.03□□□□□ -0.48
VAMP4-201ENST00000236192 A0A0A6YYH2 397 aa12.03□□□□□ -0.48
VAMP4-201ENST00000236192 A6NJ64 397 aa12.03□□□□□ -0.48
VAMP4-201ENST00000236192 ZNF878C9JN71 531 aa12.03□□□□□ -0.48
VAMP4-201ENST00000236192 RENP00797 406 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms