RNA–Protein interactions for RNA: ENST00000226328.8

RUFY3-201, Transcript of RUN and FYVE domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene RUFY3, Length 4,233 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY3-201ENST00000226328 RAP1BP61224 184 aa4.8□□□□□ -1.64
RUFY3-201ENST00000226328 RAP1AP62834 184 aa4.8□□□□□ -1.64
RUFY3-201ENST00000226328 PDE7AQ13946 482 aa4.8□□□□□ -1.64
RUFY3-201ENST00000226328 SWI5Q1ZZU3 235 aa4.8□□□□□ -1.64
RUFY3-201ENST00000226328 SYT14P1Q58G82 188 aa4.8□□□□□ -1.64
RUFY3-201ENST00000226328 PRAMEF9Q5VWM5 478 aa4.8□□□□□ -1.64
RUFY3-201ENST00000226328 GCNT2Q8N0V5 402 aa4.8□□□□□ -1.64
RUFY3-201ENST00000226328 FBXL14Q8N1E6 418 aa4.8□□□□□ -1.64
RUFY3-201ENST00000226328 CLEC4FQ8N1N0 589 aa4.8□□□□□ -1.64
RUFY3-201ENST00000226328 OR4C15Q8NGM1 316 aa4.8□□□□□ -1.64
RUFY3-201ENST00000226328 OR2T11Q8NH01 316 aa4.8□□□□□ -1.64
RUFY3-201ENST00000226328 C3orf30Q96M34 536 aa4.8□□□□□ -1.64
RUFY3-201ENST00000226328 SEPHS2Q99611 448 aa4.8□□□□□ -1.64
RUFY3-201ENST00000226328 ULBP2Q9BZM5 246 aa4.8□□□□□ -1.64
RUFY3-201ENST00000226328 SAR1AQ9NR31 198 aa4.8□□□□□ -1.64
RUFY3-201ENST00000226328 CTPS2Q9NRF8 586 aa4.8□□□□□ -1.64
RUFY3-201ENST00000226328 CPSF4LA6NMK7 179 aaKnown RBP4.8□□□□□ -1.64
RUFY3-201ENST00000226328 ENO4A6NNW6 628 aa4.8□□□□□ -1.64
RUFY3-201ENST00000226328 PRKNO60260 465 aaPredicted RBP4.8□□□□□ -1.64
RUFY3-201ENST00000226328 NME6O75414 186 aaPredicted RBP4.8□□□□□ -1.64
RUFY3-201ENST00000226328 H1F0P07305 194 aaKnown RBP4.8□□□□□ -1.64
RUFY3-201ENST00000226328 CHRM4P08173 479 aa4.8□□□□□ -1.64
RUFY3-201ENST00000226328 ARAFP10398 606 aa4.8□□□□□ -1.64
RUFY3-201ENST00000226328 GCH1P30793 250 aa4.8□□□□□ -1.64
RUFY3-201ENST00000226328 PRKAR1BP31321 381 aa4.8□□□□□ -1.64
RUFY3-201ENST00000226328 APLNRP35414 380 aa4.8□□□□□ -1.64
RUFY3-201ENST00000226328 RPS6KA3P51812 740 aa4.8□□□□□ -1.64
RUFY3-201ENST00000226328 PRPS1P60891 318 aa4.8□□□□□ -1.64
RUFY3-201ENST00000226328 PCBD1P61457 104 aa4.8□□□□□ -1.64
RUFY3-201ENST00000226328 TOP3AQ13472 1001 aaPredicted RBP4.8□□□□□ -1.64
RUFY3-201ENST00000226328 MAPK14Q16539 360 aa4.8□□□□□ -1.64
RUFY3-201ENST00000226328 ZNF791Q3KP31 576 aaPredicted RBP4.8□□□□□ -1.64
RUFY3-201ENST00000226328 SPATS1Q496A3 300 aa4.8□□□□□ -1.64
RUFY3-201ENST00000226328 H3F3CQ6NXT2 135 aa4.8□□□□□ -1.64
RUFY3-201ENST00000226328 TMEM108Q6UXF1 575 aa4.8□□□□□ -1.64
RUFY3-201ENST00000226328 TRPM8Q7Z2W7 1104 aa4.8□□□□□ -1.64
RUFY3-201ENST00000226328 CARM1Q86X55 608 aa4.8□□□□□ -1.64
RUFY3-201ENST00000226328 ZNF615Q8N8J6 731 aa4.8□□□□□ -1.64
RUFY3-201ENST00000226328 SMYD1Q8NB12 490 aa4.8□□□□□ -1.64
RUFY3-201ENST00000226328 MDS2Q8NDY4 140 aa4.8□□□□□ -1.64
RUFY3-201ENST00000226328 RNASE6Q93091 150 aaKnown RBP4.8□□□□□ -1.64
RUFY3-201ENST00000226328 SCMH1Q96GD3 660 aa4.8□□□□□ -1.64
RUFY3-201ENST00000226328 AURKBQ96GD4 344 aaPredicted RBP4.8□□□□□ -1.64
RUFY3-201ENST00000226328 BDH2Q9BUT1 245 aa4.8□□□□□ -1.64
RUFY3-201ENST00000226328 OR2B2Q9GZK3 357 aa4.8□□□□□ -1.64
RUFY3-201ENST00000226328 TMEM165Q9HC07 324 aa4.8□□□□□ -1.64
RUFY3-201ENST00000226328 NKIRAS2Q9NYR9 191 aa4.8□□□□□ -1.64
RUFY3-201ENST00000226328 ADAM21Q9UKJ8 722 aa4.8□□□□□ -1.64
RUFY3-201ENST00000226328 CLEC4AQ9UMR7 237 aa4.8□□□□□ -1.64
RUFY3-201ENST00000226328 PRPF19Q9UMS4 504 aaKnown RBP4.8□□□□□ -1.64
RUFY3-201ENST00000226328 TRAV36DV7A0A075B6V5 113 aa4.8□□□□□ -1.64
RUFY3-201ENST00000226328 RIIAD1A6NNX1 92 aa4.8□□□□□ -1.64
RUFY3-201ENST00000226328 EFCAB9A8MZ26 197 aa4.8□□□□□ -1.64
RUFY3-201ENST00000226328 C11orf98E9PRG8 122 aa4.8□□□□□ -1.64
RUFY3-201ENST00000226328 J3KRW8 73 aa4.8□□□□□ -1.64
RUFY3-201ENST00000226328 SYT5O00445 386 aa4.8□□□□□ -1.64
RUFY3-201ENST00000226328 NEURL1O76050 574 aa4.8□□□□□ -1.64
RUFY3-201ENST00000226328 IFI30P13284 250 aa4.8□□□□□ -1.64
RUFY3-201ENST00000226328 ATP6V1B2P21281 511 aa4.8□□□□□ -1.64
RUFY3-201ENST00000226328 TNFSF4P23510 183 aa4.8□□□□□ -1.64
RUFY3-201ENST00000226328 PTPN6P29350 595 aa4.8□□□□□ -1.64
RUFY3-201ENST00000226328 RAC3P60763 192 aa4.8□□□□□ -1.64
RUFY3-201ENST00000226328 CRYZQ08257 329 aaKnown RBP4.8□□□□□ -1.64
RUFY3-201ENST00000226328 FOXF1Q12946 379 aa4.8□□□□□ -1.64
RUFY3-201ENST00000226328 SYPL1Q16563 259 aa4.8□□□□□ -1.64
RUFY3-201ENST00000226328 FAM69AQ5T7M9 428 aa4.8□□□□□ -1.64
RUFY3-201ENST00000226328 SAXO2Q658L1 398 aa4.8□□□□□ -1.64
RUFY3-201ENST00000226328 CCDC80Q76M96 950 aa4.8□□□□□ -1.64
RUFY3-201ENST00000226328 YTHDF3Q7Z739 585 aaKnown RBP4.8□□□□□ -1.64
RUFY3-201ENST00000226328 PEG10Q86TG7 708 aaKnown RBP4.8□□□□□ -1.64
RUFY3-201ENST00000226328 SPNS2Q8IVW8 549 aa4.8□□□□□ -1.64
RUFY3-201ENST00000226328 ZNF321PQ8N8H1 164 aa4.8□□□□□ -1.64
RUFY3-201ENST00000226328 OR10D3Q8NH80 312 aa4.8□□□□□ -1.64
RUFY3-201ENST00000226328 MOSPD2Q8NHP6 518 aa4.8□□□□□ -1.64
RUFY3-201ENST00000226328 FAM222BQ8WU58 562 aa4.8□□□□□ -1.64
RUFY3-201ENST00000226328 ZNF681Q96N22 645 aa4.8□□□□□ -1.64
RUFY3-201ENST00000226328 TREX2Q9BQ50 279 aaPredicted RBP4.8□□□□□ -1.64
RUFY3-201ENST00000226328 EBF4Q9BQW3 602 aa4.8□□□□□ -1.64
RUFY3-201ENST00000226328 TTYH2Q9BSA4 534 aa4.8□□□□□ -1.64
RUFY3-201ENST00000226328 TMEM121BQ9BXQ6 578 aaPredicted RBP4.8□□□□□ -1.64
RUFY3-201ENST00000226328 POLDIP3Q9BY77 421 aaKnown RBP4.8□□□□□ -1.64
RUFY3-201ENST00000226328 POLR2J2Q9GZM3 115 aaKnown RBP4.8□□□□□ -1.64
RUFY3-201ENST00000226328 POLR2J3Q9H1A7 115 aaKnown RBP4.8□□□□□ -1.64
RUFY3-201ENST00000226328 ZNF703Q9H7S9 590 aaPredicted RBP4.8□□□□□ -1.64
RUFY3-201ENST00000226328 GRHPRQ9UBQ7 328 aa4.8□□□□□ -1.64
RUFY3-201ENST00000226328 PLEKHB1Q9UF11 243 aaPredicted RBP4.8□□□□□ -1.64
RUFY3-201ENST00000226328 ZNF292O60281 2723 aa4.8□□□□□ -1.64
RUFY3-201ENST00000226328 TP53BP1Q12888 1972 aaPredicted RBP4.8□□□□□ -1.64
RUFY3-201ENST00000226328 TNFSF11O14788 317 aa4.8□□□□□ -1.64
RUFY3-201ENST00000226328 SNX3O60493 162 aa4.8□□□□□ -1.64
RUFY3-201ENST00000226328 TPPPO94811 219 aa4.8□□□□□ -1.64
RUFY3-201ENST00000226328 EPPINO95925 133 aa4.8□□□□□ -1.64
RUFY3-201ENST00000226328 MT-ATP6P00846 226 aa4.8□□□□□ -1.64
RUFY3-201ENST00000226328 OPN1SWP03999 348 aa4.8□□□□□ -1.64
RUFY3-201ENST00000226328 FABP3P05413 133 aa4.8□□□□□ -1.64
RUFY3-201ENST00000226328 SBK3P0C264 359 aa4.8□□□□□ -1.64
RUFY3-201ENST00000226328 CD79AP11912 226 aa4.8□□□□□ -1.64
RUFY3-201ENST00000226328 SLC6A6P31641 620 aa4.8□□□□□ -1.64
RUFY3-201ENST00000226328 RNF144AP50876 292 aaPredicted RBP4.8□□□□□ -1.64
RUFY3-201ENST00000226328 CEACAM7Q14002 265 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms