RNA–Protein interactions for RNA: ENST00000225696.8

NUP88-201, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 2,194 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-201ENST00000225696 ARHGAP11BQ3KRB8 267 aa11.44□□□□□ -0.58
NUP88-201ENST00000225696 SFRP5Q5T4F7 317 aa11.44□□□□□ -0.58
NUP88-201ENST00000225696 HACD4Q5VWC8 232 aa11.44□□□□□ -0.58
NUP88-201ENST00000225696 FIGNL1Q6PIW4 674 aa11.44□□□□□ -0.58
NUP88-201ENST00000225696 LINGO2Q7L985 606 aa11.44□□□□□ -0.58
NUP88-201ENST00000225696 FGD2Q7Z6J4 655 aa11.44□□□□□ -0.58
NUP88-201ENST00000225696 TTLQ8NG68 377 aa11.44□□□□□ -0.58
NUP88-201ENST00000225696 RBPMSQ93062 196 aaKnown RBP11.44□□□□□ -0.58
NUP88-201ENST00000225696 MS4A4EQ96PG1 132 aa11.44□□□□□ -0.58
NUP88-201ENST00000225696 ARPC5LQ9BPX5 153 aa11.44□□□□□ -0.58
NUP88-201ENST00000225696 ZNF559Q9BR84 538 aa11.44□□□□□ -0.58
NUP88-201ENST00000225696 POT1Q9NUX5 634 aa11.44□□□□□ -0.58
NUP88-201ENST00000225696 RDH8Q9NYR8 311 aa11.44□□□□□ -0.58
NUP88-201ENST00000225696 PTTG3PQ9NZH4 202 aa11.44□□□□□ -0.58
NUP88-201ENST00000225696 COPZ2Q9P299 210 aa11.44□□□□□ -0.58
NUP88-201ENST00000225696 CAMK2AQ9UQM7 478 aa11.44□□□□□ -0.58
NUP88-201ENST00000225696 SLC35A3Q9Y2D2 325 aa11.44□□□□□ -0.58
NUP88-201ENST00000225696 ALPK2Q86TB3 2170 aa11.44□□□□□ -0.58
NUP88-201ENST00000225696 CARNS1A5YM72 827 aa11.44□□□□□ -0.58
NUP88-201ENST00000225696 FAM86C2PA6NEL3 165 aa11.44□□□□□ -0.58
NUP88-201ENST00000225696 POM121CA8CG34 1229 aa11.44□□□□□ -0.58
NUP88-201ENST00000225696 TSPAN4O14817 238 aa11.44□□□□□ -0.58
NUP88-201ENST00000225696 ARPC1BO15143 372 aaKnown RBP11.44□□□□□ -0.58
NUP88-201ENST00000225696 PTP4A3O75365 173 aa11.44□□□□□ -0.58
NUP88-201ENST00000225696 HOXD4P09016 255 aaPredicted RBP11.44□□□□□ -0.58
NUP88-201ENST00000225696 ACSM4P0C7M7 580 aa11.44□□□□□ -0.58
NUP88-201ENST00000225696 PTGS2P35354 604 aa11.44□□□□□ -0.58
NUP88-201ENST00000225696 DRD3P35462 400 aa11.44□□□□□ -0.58
NUP88-201ENST00000225696 TAGLNQ01995 201 aaKnown RBP11.44□□□□□ -0.58
NUP88-201ENST00000225696 DUSP8Q13202 625 aa11.44□□□□□ -0.58
NUP88-201ENST00000225696 KRT33BQ14525 404 aa11.44□□□□□ -0.58
NUP88-201ENST00000225696 FAM199XQ6PEV8 388 aaPredicted RBP11.44□□□□□ -0.58
NUP88-201ENST00000225696 NHLRC1Q6VVB1 395 aa11.44□□□□□ -0.58
NUP88-201ENST00000225696 SPRED2Q7Z698 418 aa11.44□□□□□ -0.58
NUP88-201ENST00000225696 GPAT4Q86UL3 456 aa11.44□□□□□ -0.58
NUP88-201ENST00000225696 NRROSQ86YC3 692 aa11.44□□□□□ -0.58
NUP88-201ENST00000225696 GRAMD2AQ8IUY3 354 aa11.44□□□□□ -0.58
NUP88-201ENST00000225696 SDR9C7Q8NEX9 313 aa11.44□□□□□ -0.58
NUP88-201ENST00000225696 OR2L8Q8NGY9 312 aa11.44□□□□□ -0.58
NUP88-201ENST00000225696 ZNF671Q8TAW3 534 aa11.44□□□□□ -0.58
NUP88-201ENST00000225696 RIT1Q92963 219 aa11.44□□□□□ -0.58
NUP88-201ENST00000225696 SLC25A38Q96DW6 304 aa11.44□□□□□ -0.58
NUP88-201ENST00000225696 KLHL15Q96M94 604 aa11.44□□□□□ -0.58
NUP88-201ENST00000225696 SFXN2Q96NB2 322 aa11.44□□□□□ -0.58
NUP88-201ENST00000225696 REG4Q9BYZ8 158 aa11.44□□□□□ -0.58
NUP88-201ENST00000225696 MS4A7Q9GZW8 240 aaPredicted RBP11.44□□□□□ -0.58
NUP88-201ENST00000225696 ZCCHC4Q9H5U6 513 aa11.44□□□□□ -0.58
NUP88-201ENST00000225696 ADAP2Q9NPF8 381 aa11.44□□□□□ -0.58
NUP88-201ENST00000225696 SPATA2Q9UM82 520 aa11.44□□□□□ -0.58
NUP88-201ENST00000225696 SLC27A6Q9Y2P4 619 aa11.44□□□□□ -0.58
NUP88-201ENST00000225696 KCNMB2Q9Y691 235 aa11.44□□□□□ -0.58
NUP88-201ENST00000225696 TRAV1-2A0A0B4J238 106 aa11.43□□□□□ -0.58
NUP88-201ENST00000225696 ANKRD61A6NGH8 418 aa11.43□□□□□ -0.58
NUP88-201ENST00000225696 ZNF860A6NHJ4 632 aa11.43□□□□□ -0.58
NUP88-201ENST00000225696 ACOD1A6NK06 481 aa11.43□□□□□ -0.58
NUP88-201ENST00000225696 GNB5O14775 395 aa11.43□□□□□ -0.58
NUP88-201ENST00000225696 KHNYNO15037 678 aaKnown RBP11.43□□□□□ -0.58
NUP88-201ENST00000225696 PROS1P07225 676 aa11.43□□□□□ -0.58
NUP88-201ENST00000225696 ATF4P18848 351 aaPredicted RBP11.43□□□□□ -0.58
NUP88-201ENST00000225696 CD53P19397 219 aa11.43□□□□□ -0.58
NUP88-201ENST00000225696 ANXA7P20073 488 aaKnown RBP11.43□□□□□ -0.58
NUP88-201ENST00000225696 DDX6P26196 483 aaKnown RBP eCLIP11.43□□□□□ -0.58
NUP88-201ENST00000225696 PPM1AP35813 382 aa11.43□□□□□ -0.58
NUP88-201ENST00000225696 WASP42768 502 aa11.43□□□□□ -0.58
NUP88-201ENST00000225696 OPCMLQ14982 345 aa11.43□□□□□ -0.58
NUP88-201ENST00000225696 CDK5R1Q15078 307 aa11.43□□□□□ -0.58
NUP88-201ENST00000225696 ZC3H14Q6PJT7 736 aaKnown RBP11.43□□□□□ -0.58
NUP88-201ENST00000225696 SLC39A5Q6ZMH5 540 aa11.43□□□□□ -0.58
NUP88-201ENST00000225696 PRSS42Q7Z5A4 293 aa11.43□□□□□ -0.58
NUP88-201ENST00000225696 RANBP3LQ86VV4 465 aaPredicted RBP11.43□□□□□ -0.58
NUP88-201ENST00000225696 OR2L13Q8N349 312 aa11.43□□□□□ -0.58
NUP88-201ENST00000225696 LRRC25Q8N386 305 aaPredicted RBP11.43□□□□□ -0.58
NUP88-201ENST00000225696 HDDC3Q8N4P3 179 aa11.43□□□□□ -0.58
NUP88-201ENST00000225696 TEX19Q8NA77 164 aa11.43□□□□□ -0.58
NUP88-201ENST00000225696 OR4K13Q8NH42 304 aa11.43□□□□□ -0.58
NUP88-201ENST00000225696 ZCCHC10Q8TBK6 192 aa11.43□□□□□ -0.58
NUP88-201ENST00000225696 CXorf58Q96LI9 332 aa11.43□□□□□ -0.58
NUP88-201ENST00000225696 PTCHD1Q96NR3 888 aa11.43□□□□□ -0.58
NUP88-201ENST00000225696 GPR174Q9BXC1 333 aa11.43□□□□□ -0.58
NUP88-201ENST00000225696 C12orf10Q9HB07 376 aa11.43□□□□□ -0.58
NUP88-201ENST00000225696 NPDC1Q9NQX5 325 aaPredicted RBP11.43□□□□□ -0.58
NUP88-201ENST00000225696 INPP5EQ9NRR6 644 aa11.43□□□□□ -0.58
NUP88-201ENST00000225696 HCN3Q9P1Z3 774 aa11.43□□□□□ -0.58
NUP88-201ENST00000225696 POMT2Q9UKY4 750 aa11.43□□□□□ -0.58
NUP88-201ENST00000225696 MAB21L2Q9Y586 359 aa11.43□□□□□ -0.58
NUP88-201ENST00000225696 PCDHGA5Q9Y5G8 931 aa11.43□□□□□ -0.58
NUP88-201ENST00000225696 DUXAA6NLW8 204 aa11.43□□□□□ -0.58
NUP88-201ENST00000225696 RIIAD1A6NNX1 92 aa11.43□□□□□ -0.58
NUP88-201ENST00000225696 GSTZ1O43708 216 aaPredicted RBP11.43□□□□□ -0.58
NUP88-201ENST00000225696 RCBTB2O95199 551 aa11.43□□□□□ -0.58
NUP88-201ENST00000225696 CLTBP09497 229 aa11.43□□□□□ -0.58
NUP88-201ENST00000225696 UCHL1P09936 223 aa11.43□□□□□ -0.58
NUP88-201ENST00000225696 RAG2P55895 527 aa11.43□□□□□ -0.58
NUP88-201ENST00000225696 PITPNAQ00169 270 aa11.43□□□□□ -0.58
NUP88-201ENST00000225696 DYRK1AQ13627 763 aa11.43□□□□□ -0.58
NUP88-201ENST00000225696 IRF4Q15306 451 aa11.43□□□□□ -0.58
NUP88-201ENST00000225696 TRAM1Q15629 374 aa11.43□□□□□ -0.58
NUP88-201ENST00000225696 TUSC1Q2TAM9 212 aa11.43□□□□□ -0.58
NUP88-201ENST00000225696 GXYLT1Q4G148 440 aa11.43□□□□□ -0.58
NUP88-201ENST00000225696 DEFB134Q4QY38 66 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms