RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 SLC38A1Q9H2H9 487 aa12.71□□□□□ -0.38
TGFBR3-201ENST00000212355 CPNE7Q9UBL6 633 aa12.71□□□□□ -0.38
TGFBR3-201ENST00000212355 TMEM72A0PK05 275 aa12.7□□□□□ -0.38
TGFBR3-201ENST00000212355 TMEM202A6NGA9 273 aa12.7□□□□□ -0.38
TGFBR3-201ENST00000212355 ZBTB42B2RXF5 422 aa12.7□□□□□ -0.38
TGFBR3-201ENST00000212355 SLC5A2P31639 672 aa12.7□□□□□ -0.38
TGFBR3-201ENST00000212355 PRPS1P60891 318 aa12.7□□□□□ -0.38
TGFBR3-201ENST00000212355 ZNF852Q6ZMS4 543 aa12.7□□□□□ -0.38
TGFBR3-201ENST00000212355 SERPINA11Q86U17 422 aa12.7□□□□□ -0.38
TGFBR3-201ENST00000212355 RBM45Q8IUH3 476 aaKnown RBP12.7□□□□□ -0.38
TGFBR3-201ENST00000212355 KDM8Q8N371 416 aa12.7□□□□□ -0.38
TGFBR3-201ENST00000212355 ST7LQ8TDW4 575 aa12.7□□□□□ -0.38
TGFBR3-201ENST00000212355 TNFRSF13CQ96RJ3 184 aa12.7□□□□□ -0.38
TGFBR3-201ENST00000212355 LAMB4A4D0S4 1761 aa12.7□□□□□ -0.38
TGFBR3-201ENST00000212355 PRAMEF27A3QJZ7 478 aa12.7□□□□□ -0.38
TGFBR3-201ENST00000212355 M0QYG6 137 aa12.7□□□□□ -0.38
TGFBR3-201ENST00000212355 ANKRD28O15084 1053 aa12.7□□□□□ -0.38
TGFBR3-201ENST00000212355 SULT1B1O43704 296 aa12.7□□□□□ -0.38
TGFBR3-201ENST00000212355 FZD7O75084 574 aa12.7□□□□□ -0.38
TGFBR3-201ENST00000212355 SIX6O95475 246 aa12.7□□□□□ -0.38
TGFBR3-201ENST00000212355 TIMP1P01033 207 aa12.7□□□□□ -0.38
TGFBR3-201ENST00000212355 IGHV3-9P01782 118 aa12.7□□□□□ -0.38
TGFBR3-201ENST00000212355 HNRNPA1P09651 372 aaKnown RBP eCLIP12.7□□□□□ -0.38
TGFBR3-201ENST00000212355 COQ5Q5HYK3 327 aa12.7□□□□□ -0.38
TGFBR3-201ENST00000212355 PRAMEF9Q5VWM5 478 aa12.7□□□□□ -0.38
TGFBR3-201ENST00000212355 MS4A15Q8N5U1 240 aa12.7□□□□□ -0.38
TGFBR3-201ENST00000212355 CRYGNQ8WXF5 182 aa12.7□□□□□ -0.38
TGFBR3-201ENST00000212355 ZBTB8AQ96BR9 441 aa12.7□□□□□ -0.38
TGFBR3-201ENST00000212355 DHCR7Q9UBM7 475 aaKnown RBP12.7□□□□□ -0.38
TGFBR3-201ENST00000212355 LILRB5O75023 590 aa12.7□□□□□ -0.38
TGFBR3-201ENST00000212355 MED6O75586 246 aa12.7□□□□□ -0.38
TGFBR3-201ENST00000212355 POU3F2P20265 443 aaPredicted RBP12.7□□□□□ -0.38
TGFBR3-201ENST00000212355 WDR5P61964 334 aaKnown RBP12.7□□□□□ -0.38
TGFBR3-201ENST00000212355 TRMT2BQ96GJ1 504 aaKnown RBP12.7□□□□□ -0.38
TGFBR3-201ENST00000212355 SYT11Q9BT88 431 aa12.7□□□□□ -0.38
TGFBR3-201ENST00000212355 HCAR1Q9BXC0 346 aa12.7□□□□□ -0.38
TGFBR3-201ENST00000212355 IGHV3-20A0A0C4DH32 117 aa12.7□□□□□ -0.38
TGFBR3-201ENST00000212355 TSPAN11A1L157 253 aa12.7□□□□□ -0.38
TGFBR3-201ENST00000212355 OR5K4A6NMS3 321 aa12.7□□□□□ -0.38
TGFBR3-201ENST00000212355 K7ESM1 405 aa12.7□□□□□ -0.38
TGFBR3-201ENST00000212355 ZNF593O00488 134 aaPredicted RBP12.7□□□□□ -0.38
TGFBR3-201ENST00000212355 FADS1O60427 444 aa12.7□□□□□ -0.38
TGFBR3-201ENST00000212355 ACTL6BO94805 426 aa12.7□□□□□ -0.38
TGFBR3-201ENST00000212355 ZNF44P15621 663 aa12.7□□□□□ -0.38
TGFBR3-201ENST00000212355 HRH2P25021 359 aa12.7□□□□□ -0.38
TGFBR3-201ENST00000212355 CDRT4Q8N9R6 151 aa12.7□□□□□ -0.38
TGFBR3-201ENST00000212355 ARRDC2Q8TBH0 407 aa12.7□□□□□ -0.38
TGFBR3-201ENST00000212355 DNMT3BQ9UBC3 853 aaKnown RBP12.7□□□□□ -0.38
TGFBR3-201ENST00000212355 TMEM269A0A1B0GVZ9 245 aa12.7□□□□□ -0.38
TGFBR3-201ENST00000212355 PENKP01210 267 aaPredicted RBP12.7□□□□□ -0.38
TGFBR3-201ENST00000212355 RPS2P15880 293 aaKnown RBP12.7□□□□□ -0.38
TGFBR3-201ENST00000212355 GPR18Q14330 331 aa12.7□□□□□ -0.38
TGFBR3-201ENST00000212355 SF3A2Q15428 464 aaKnown RBP12.7□□□□□ -0.38
TGFBR3-201ENST00000212355 DPPA4Q7L190 304 aa12.7□□□□□ -0.38
TGFBR3-201ENST00000212355 EID2Q8N6I1 236 aa12.7□□□□□ -0.38
TGFBR3-201ENST00000212355 ARRDC3Q96B67 414 aa12.7□□□□□ -0.38
TGFBR3-201ENST00000212355 NMNAT3Q96T66 252 aa12.7□□□□□ -0.38
TGFBR3-201ENST00000212355 VRK1Q99986 396 aaPredicted RBP12.7□□□□□ -0.38
TGFBR3-201ENST00000212355 PBDC1Q9BVG4 233 aa12.7□□□□□ -0.38
TGFBR3-201ENST00000212355 SLA2Q9H6Q3 261 aa12.7□□□□□ -0.38
TGFBR3-201ENST00000212355 MEPEQ9NQ76 525 aaPredicted RBP12.7□□□□□ -0.38
TGFBR3-201ENST00000212355 DZANK1Q9NVP4 752 aa12.7□□□□□ -0.38
TGFBR3-201ENST00000212355 PGAP2Q9UHJ9 254 aa12.7□□□□□ -0.38
TGFBR3-201ENST00000212355 CSO75390 466 aaKnown RBP12.69□□□□□ -0.38
TGFBR3-201ENST00000212355 CDK2P24941 298 aa12.69□□□□□ -0.38
TGFBR3-201ENST00000212355 ADRA1AP35348 466 aa12.69□□□□□ -0.38
TGFBR3-201ENST00000212355 EMP2P54851 167 aa12.69□□□□□ -0.38
TGFBR3-201ENST00000212355 SLC14A1Q13336 389 aa12.69□□□□□ -0.38
TGFBR3-201ENST00000212355 PGGHGQ32M88 737 aa12.69□□□□□ -0.38
TGFBR3-201ENST00000212355 METTL11BQ5VVY1 283 aa12.69□□□□□ -0.38
TGFBR3-201ENST00000212355 LRIT1Q9P2V4 623 aa12.69□□□□□ -0.38
TGFBR3-201ENST00000212355 KDM3BQ7LBC6 1761 aa12.69□□□□□ -0.38
TGFBR3-201ENST00000212355 ANKRD61A6NGH8 418 aa12.69□□□□□ -0.38
TGFBR3-201ENST00000212355 ZIC2O95409 532 aaPredicted RBP12.69□□□□□ -0.38
TGFBR3-201ENST00000212355 APBB3O95704 486 aa12.69□□□□□ -0.38
TGFBR3-201ENST00000212355 MAOAP21397 527 aa12.69□□□□□ -0.38
TGFBR3-201ENST00000212355 PRKAR1BP31321 381 aa12.69□□□□□ -0.38
TGFBR3-201ENST00000212355 SBSNQ6UWP8 590 aa12.69□□□□□ -0.38
TGFBR3-201ENST00000212355 MRPL10Q7Z7H8 261 aaKnown RBP12.69□□□□□ -0.38
TGFBR3-201ENST00000212355 SLC38A5Q8WUX1 472 aa12.69□□□□□ -0.38
TGFBR3-201ENST00000212355 UGT2A1Q9Y4X1 527 aa12.69□□□□□ -0.38
TGFBR3-201ENST00000212355 MYO9BQ13459 2157 aa12.69□□□□□ -0.38
TGFBR3-201ENST00000212355 CDHR4A6H8M9 788 aa12.69□□□□□ -0.38
TGFBR3-201ENST00000212355 TXNDC12O95881 172 aa12.69□□□□□ -0.38
TGFBR3-201ENST00000212355 IFNA1P01562 189 aa12.69□□□□□ -0.38
TGFBR3-201ENST00000212355 ITGB7P26010 798 aa12.69□□□□□ -0.38
TGFBR3-201ENST00000212355 FOLR3P41439 243 aa12.69□□□□□ -0.38
TGFBR3-201ENST00000212355 ABHD17BQ5VST6 288 aa12.69□□□□□ -0.38
TGFBR3-201ENST00000212355 KIAA0895LQ68EN5 471 aa12.69□□□□□ -0.38
TGFBR3-201ENST00000212355 ZNF440Q8IYI8 595 aa12.69□□□□□ -0.38
TGFBR3-201ENST00000212355 FAM160A2Q8N612 972 aaPredicted RBP12.69□□□□□ -0.38
TGFBR3-201ENST00000212355 WFDC5Q8TCV5 224 aa12.69□□□□□ -0.38
TGFBR3-201ENST00000212355 PGAP3Q96FM1 320 aaPredicted RBP12.69□□□□□ -0.38
TGFBR3-201ENST00000212355 ZNF578Q96N58 590 aaPredicted RBP12.69□□□□□ -0.38
TGFBR3-201ENST00000212355 C1QTNF2Q9BXJ5 285 aa12.69□□□□□ -0.38
TGFBR3-201ENST00000212355 NRSN2Q9GZP1 204 aa12.69□□□□□ -0.38
TGFBR3-201ENST00000212355 OPA3Q9H6K4 179 aa12.69□□□□□ -0.38
TGFBR3-201ENST00000212355 BIN3Q9NQY0 253 aa12.69□□□□□ -0.38
TGFBR3-201ENST00000212355 TAAR2Q9P1P5 351 aa12.69□□□□□ -0.38
TGFBR3-201ENST00000212355 DRGXA6NNA5 263 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms