RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 SMLR1H3BR10 107 aa11.16□□□□□ -0.62
CHPF2-201ENST00000035307 KCNJ13O60928 360 aa11.16□□□□□ -0.62
CHPF2-201ENST00000035307 YES1P07947 543 aa11.16□□□□□ -0.62
CHPF2-201ENST00000035307 TEAD1P28347 426 aa11.16□□□□□ -0.62
CHPF2-201ENST00000035307 SLC1A3P43003 542 aa11.16□□□□□ -0.62
CHPF2-201ENST00000035307 HNRNPFP52597 415 aaKnown RBP11.16□□□□□ -0.62
CHPF2-201ENST00000035307 PPP3R1P63098 170 aa11.16□□□□□ -0.62
CHPF2-201ENST00000035307 ADAM8P78325 824 aa11.16□□□□□ -0.62
CHPF2-201ENST00000035307 ZNF782Q6ZMW2 699 aaPredicted RBP11.16□□□□□ -0.62
CHPF2-201ENST00000035307 ZNF550Q7Z398 422 aa11.16□□□□□ -0.62
CHPF2-201ENST00000035307 GDF7Q7Z4P5 450 aa11.16□□□□□ -0.62
CHPF2-201ENST00000035307 VN1R4Q7Z5H5 301 aa11.16□□□□□ -0.62
CHPF2-201ENST00000035307 UBQLNLQ8IYU4 475 aa11.16□□□□□ -0.62
CHPF2-201ENST00000035307 MINDY2Q8NBR6 621 aa11.16□□□□□ -0.62
CHPF2-201ENST00000035307 FAM174AQ8TBP5 190 aa11.16□□□□□ -0.62
CHPF2-201ENST00000035307 THAP4Q8WY91 577 aa11.16□□□□□ -0.62
CHPF2-201ENST00000035307 ZNF775Q96BV0 537 aaPredicted RBP11.16□□□□□ -0.62
CHPF2-201ENST00000035307 SLC35A4Q96G79 324 aa11.16□□□□□ -0.62
CHPF2-201ENST00000035307 NEDD4LQ96PU5 975 aa11.16□□□□□ -0.62
CHPF2-201ENST00000035307 CACNG6Q9BXT2 260 aa11.16□□□□□ -0.62
CHPF2-201ENST00000035307 FAM86C1Q9NVL1 165 aa11.16□□□□□ -0.62
CHPF2-201ENST00000035307 SIDT1Q9NXL6 827 aaKnown RBP11.16□□□□□ -0.62
CHPF2-201ENST00000035307 RPH3AQ9Y2J0 694 aaPredicted RBP11.16□□□□□ -0.62
CHPF2-201ENST00000035307 AP1M2Q9Y6Q5 423 aa11.16□□□□□ -0.62
CHPF2-201ENST00000035307 MEN1O00255 615 aa11.16□□□□□ -0.62
CHPF2-201ENST00000035307 SIGLEC6O43699 453 aa11.16□□□□□ -0.62
CHPF2-201ENST00000035307 LIPCP11150 499 aa11.16□□□□□ -0.62
CHPF2-201ENST00000035307 MAKP20794 623 aa11.16□□□□□ -0.62
CHPF2-201ENST00000035307 NRG3P56975 720 aa11.16□□□□□ -0.62
CHPF2-201ENST00000035307 ILKQ13418 452 aa11.16□□□□□ -0.62
CHPF2-201ENST00000035307 CTF1Q16619 201 aa11.16□□□□□ -0.62
CHPF2-201ENST00000035307 ACSM3Q53FZ2 586 aa11.16□□□□□ -0.62
CHPF2-201ENST00000035307 USP51Q70EK9 711 aa11.16□□□□□ -0.62
CHPF2-201ENST00000035307 OR4N2Q8NGD1 307 aa11.16□□□□□ -0.62
CHPF2-201ENST00000035307 CASTOR1Q8WTX7 329 aa11.16□□□□□ -0.62
CHPF2-201ENST00000035307 CHPT1Q8WUD6 406 aa11.16□□□□□ -0.62
CHPF2-201ENST00000035307 NMNAT3Q96T66 252 aa11.16□□□□□ -0.62
CHPF2-201ENST00000035307 OR10A4Q9H209 315 aa11.16□□□□□ -0.62
CHPF2-201ENST00000035307 DPAGT1Q9H3H5 408 aa11.16□□□□□ -0.62
CHPF2-201ENST00000035307 WNT16Q9UBV4 365 aa11.16□□□□□ -0.62
CHPF2-201ENST00000035307 DAPP1Q9UN19 280 aa11.16□□□□□ -0.62
CHPF2-201ENST00000035307 PCDHGB7Q9Y5F8 929 aa11.16□□□□□ -0.62
CHPF2-201ENST00000035307 A0A1W2PPV9 198 aa11.16□□□□□ -0.62
CHPF2-201ENST00000035307 EFCAB7A8K855 629 aa11.16□□□□□ -0.62
CHPF2-201ENST00000035307 SNRPBP14678 240 aaKnown RBP11.16□□□□□ -0.62
CHPF2-201ENST00000035307 RAB3BP20337 219 aa11.16□□□□□ -0.62
CHPF2-201ENST00000035307 PEBP1P30086 187 aaKnown RBP11.16□□□□□ -0.62
CHPF2-201ENST00000035307 SFTPDP35247 375 aa11.16□□□□□ -0.62
CHPF2-201ENST00000035307 SNTB2Q13425 540 aaKnown RBP11.16□□□□□ -0.62
CHPF2-201ENST00000035307 ZMYND11Q15326 602 aa11.16□□□□□ -0.62
CHPF2-201ENST00000035307 KCNJ8Q15842 424 aa11.16□□□□□ -0.62
CHPF2-201ENST00000035307 C8orf82Q6P1X6 216 aaPredicted RBP11.16□□□□□ -0.62
CHPF2-201ENST00000035307 PJA1Q8NG27 643 aa11.16□□□□□ -0.62
CHPF2-201ENST00000035307 NEK7Q8TDX7 302 aa11.16□□□□□ -0.62
CHPF2-201ENST00000035307 CHST8Q9H2A9 424 aa11.16□□□□□ -0.62
CHPF2-201ENST00000035307 TSC2P49815 1807 aa11.16□□□□□ -0.62
CHPF2-201ENST00000035307 SPTBN1Q01082 2364 aaKnown RBP11.15□□□□□ -0.62
CHPF2-201ENST00000035307 IGKV1-8A0A0C4DH67 115 aa11.15□□□□□ -0.62
CHPF2-201ENST00000035307 TEX51A0A1B0GUA7 166 aa11.15□□□□□ -0.62
CHPF2-201ENST00000035307 ZNF879B4DU55 563 aa11.15□□□□□ -0.62
CHPF2-201ENST00000035307 NPIPA5E9PKD4 350 aa11.15□□□□□ -0.62
CHPF2-201ENST00000035307 PIAS2O75928 621 aa11.15□□□□□ -0.62
CHPF2-201ENST00000035307 OR8G3PP0DMU2 310 aa11.15□□□□□ -0.62
CHPF2-201ENST00000035307 CLUP10909 449 aa11.15□□□□□ -0.62
CHPF2-201ENST00000035307 RAB15P59190 212 aa11.15□□□□□ -0.62
CHPF2-201ENST00000035307 TNFRSF17Q02223 184 aa11.15□□□□□ -0.62
CHPF2-201ENST00000035307 EEF1A2Q05639 463 aaKnown RBP11.15□□□□□ -0.62
CHPF2-201ENST00000035307 MFSD12Q6NUT3 480 aa11.15□□□□□ -0.62
CHPF2-201ENST00000035307 ESPNLQ6ZVH7 1005 aa11.15□□□□□ -0.62
CHPF2-201ENST00000035307 HHATLQ9HCP6 504 aa11.15□□□□□ -0.62
CHPF2-201ENST00000035307 NPIPA1Q9UND3 350 aa11.15□□□□□ -0.62
CHPF2-201ENST00000035307 ADAM18Q9Y3Q7 739 aa11.15□□□□□ -0.62
CHPF2-201ENST00000035307 DCDC2BA2VCK2 349 aa11.15□□□□□ -0.62
CHPF2-201ENST00000035307 TMEM221A6NGB7 291 aa11.15□□□□□ -0.62
CHPF2-201ENST00000035307 METTL15A6NJ78 407 aa11.15□□□□□ -0.62
CHPF2-201ENST00000035307 C9J4A7 227 aa11.15□□□□□ -0.62
CHPF2-201ENST00000035307 GABRPO00591 440 aa11.15□□□□□ -0.62
CHPF2-201ENST00000035307 SCRG1O75711 98 aa11.15□□□□□ -0.62
CHPF2-201ENST00000035307 TACSTD2P09758 323 aa11.15□□□□□ -0.62
CHPF2-201ENST00000035307 JUNBP17275 347 aaPredicted RBP11.15□□□□□ -0.62
CHPF2-201ENST00000035307 ZFP36L2P47974 494 aaKnown RBP11.15□□□□□ -0.62
CHPF2-201ENST00000035307 TSPAN31Q12999 210 aa11.15□□□□□ -0.62
CHPF2-201ENST00000035307 ZIC1Q15915 447 aa11.15□□□□□ -0.62
CHPF2-201ENST00000035307 ARMC10Q8N2F6 343 aa11.15□□□□□ -0.62
CHPF2-201ENST00000035307 OR13C5Q8NGS8 318 aa11.15□□□□□ -0.62
CHPF2-201ENST00000035307 CNN2Q99439 309 aaKnown RBP11.15□□□□□ -0.62
CHPF2-201ENST00000035307 UBQLN3Q9H347 655 aa11.15□□□□□ -0.62
CHPF2-201ENST00000035307 SEMA6CQ9H3T2 930 aa11.15□□□□□ -0.62
CHPF2-201ENST00000035307 ZNF304Q9HCX3 659 aa11.15□□□□□ -0.62
CHPF2-201ENST00000035307 RANGRFQ9HD47 186 aaPredicted RBP11.15□□□□□ -0.62
CHPF2-201ENST00000035307 A0A1B0GWA3 101 aa11.15□□□□□ -0.63
CHPF2-201ENST00000035307 A0A1W2PPL8 197 aa11.15□□□□□ -0.63
CHPF2-201ENST00000035307 MEIOCA2RUB1 952 aa11.15□□□□□ -0.63
CHPF2-201ENST00000035307 LYRM1O43325 122 aa11.15□□□□□ -0.63
CHPF2-201ENST00000035307 RGS9O75916 674 aaPredicted RBP11.15□□□□□ -0.63
CHPF2-201ENST00000035307 GSTT2P0CG29 244 aa11.15□□□□□ -0.63
CHPF2-201ENST00000035307 GSTT2BP0CG30 244 aa11.15□□□□□ -0.63
CHPF2-201ENST00000035307 CD1CP29017 333 aa11.15□□□□□ -0.63
CHPF2-201ENST00000035307 AQP2P41181 271 aa11.15□□□□□ -0.63
CHPF2-201ENST00000035307 MAB21L1Q13394 359 aa11.15□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms