RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Prss56F2YMG0 604 aa11.08□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Vmn1r20K7N778 303 aa11.08□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Bet1O35623 118 aa11.08□□□□□ -0.64
Pcif1-201ENSMUST00000041643 PpibP24369 216 aaKnown RBP11.08□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Zdhhc2P59267 366 aa11.08□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Il12rb2P97378 874 aa11.08□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Diras2Q5PR73 199 aa11.08□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Clrn3Q8BHH8 226 aa11.08□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Vmn1r220Q8R272 298 aa11.08□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Olfr120Q8VFQ2 330 aa11.08□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Tcam1Q99NB3 548 aa11.08□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Ddx28Q9CWT6 540 aaKnown RBP11.08□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Praf2Q9JIG8 178 aa11.08□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Myg1Q9JK81 380 aa11.08□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Gm4131A0A140LJ24 318 aa11.07□□□□□ -0.64
Pcif1-201ENSMUST00000041643 4930595M18RikA2RRY9 829 aa11.07□□□□□ -0.64
Pcif1-201ENSMUST00000041643 L3mbtl4B1B1A0 621 aa11.07□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Gm8356J3QPD3 205 aa11.07□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Vmn2r42O35192 852 aa11.07□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Igh-1aP01865 398 aa11.07□□□□□ -0.64
Pcif1-201ENSMUST00000041643 McubQ810S1 345 aa11.07□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Slc16a14Q8K1C7 512 aa11.07□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Vmn1r210Q8R274 306 aa11.07□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Olfr1395Q8VGD7 317 aa11.07□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Asb9Q91ZT8 290 aa11.07□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Fam69aQ9D6I7 428 aa11.07□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Olfr576A0A0G2JFH3 312 aa11.07□□□□□ -0.64
Pcif1-201ENSMUST00000041643 A0A286YD13 301 aa11.07□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Gm7929A0A286YDV3 213 aa11.07□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Gm21977F6U3N7 213 aa11.07□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Gm8247F6VRJ8 213 aa11.07□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Gm8005F6YKY3 213 aa11.07□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Gm3015F6ZAP6 213 aa11.07□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Gm8212F6ZMY5 213 aa11.07□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Gm7954F7BAX1 213 aa11.07□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Gm8138F7BY56 213 aa11.07□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Gm8232F7CFJ3 213 aa11.07□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Gm17079F7D8Y4 213 aa11.07□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Gm8165L7N218 213 aa11.07□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Gm8122L7N2C7 213 aa11.07□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Gm17078M0QW51 211 aa11.07□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Msx1P13297 303 aa11.07□□□□□ -0.64
Pcif1-201ENSMUST00000041643 GypaP14220 168 aa11.07□□□□□ -0.64
Pcif1-201ENSMUST00000041643 VldlrP98156 873 aa11.07□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Ankrd28Q505D1 1053 aa11.07□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Snta1Q61234 503 aa11.07□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Mfsd4aQ6PDC8 510 aa11.07□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Bcas1Q80YN3 633 aa11.07□□□□□ -0.64
Pcif1-201ENSMUST00000041643 PxkQ8BX57 582 aa11.07□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Gykl1Q8C635 549 aa11.07□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Prkd3Q8K1Y2 889 aa11.07□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Cbr3Q8K354 277 aa11.07□□□□□ -0.64
Pcif1-201ENSMUST00000041643 C8gQ8VCG4 202 aa11.07□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Fmo4Q8VHG0 560 aa11.07□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Apbb2Q9DBR4 760 aa11.07□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Dap3Q9ER88 391 aaKnown RBP11.07□□□□□ -0.64
Pcif1-201ENSMUST00000041643 MioxQ9QXN5 285 aa11.07□□□□□ -0.64
Pcif1-201ENSMUST00000041643 March7Q9WV66 693 aa11.07□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Gm6880A3KG45 208 aa11.07□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Gm498D3YYH9 372 aa11.07□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Znf296E9Q6W4 445 aaKnown RBP11.07□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Spata31d1cE9QAF1 853 aa11.07□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Pmm1O35621 262 aa11.07□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Fcgr1P26151 404 aa11.07□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Drd3P30728 446 aa11.07□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Zic1P46684 447 aa11.07□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Tial1P70318 392 aaKnown RBP11.07□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Fgf14P70379 247 aa11.07□□□□□ -0.64
Pcif1-201ENSMUST00000041643 BmxP97504 651 aa11.07□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Prelid2Q0VBB0 177 aa11.07□□□□□ -0.64
Pcif1-201ENSMUST00000041643 NfkbidQ2TB02 327 aa11.07□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Olfr140Q60878 302 aa11.07□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Tfap2cQ61312 449 aa11.07□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Tmem184bQ8BG09 407 aa11.07□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Lrrc39Q8BGI7 337 aa11.07□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Defb35Q8R2I3 63 aa11.07□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Ttc36Q8VBW8 186 aa11.07□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Rps21Q9CQR2 83 aaKnown RBP11.07□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Spns3Q9D232 514 aa11.07□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Cacna1cQ01815 2139 aa11.07□□□□□ -0.64
Pcif1-201ENSMUST00000041643 MiipA2A7Y5 387 aa11.07□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Gabrr3B2RXA8 464 aa11.07□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Scgb2b3D2XZ38 112 aa11.07□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Gm21560D3Z7A4 205 aa11.07□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Olfr1511E9PWU0 318 aa11.07□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Gm20390E9PZF0 267 aa11.07□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Olfr1510E9PZZ6 318 aa11.07□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Tm7sf2Q71KT5 418 aa11.07□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Olfr527Q7TRT9 305 aa11.07□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Olfr1090Q8VGA6 313 aa11.07□□□□□ -0.64
Pcif1-201ENSMUST00000041643 FastkQ9JIX9 511 aa11.07□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Trpm6Q8CIR4 2028 aa11.07□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Cd300ld4A2A7W1 245 aa11.07□□□□□ -0.64
Pcif1-201ENSMUST00000041643 SrsxB2RZI1 361 aa11.07□□□□□ -0.64
Pcif1-201ENSMUST00000041643 FhitO89106 150 aa11.07□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Pou3f1P21952 449 aa11.07□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Pou3f2P31360 445 aa11.07□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Rnft2Q3UF64 445 aa11.07□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Pgap1Q3UUQ7 922 aa11.07□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Cd300ld3Q6SJQ5 245 aa11.07□□□□□ -0.64
Retrieved 100 of 22,080 RNA–protein pairs in 32.9 ms