RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 NINQ8N4C6 2090 aa11.97□□□□□ -0.49
PHGDH-221ENST00000641573 USP9YO00507 2555 aaPredicted RBP11.96□□□□□ -0.49
PHGDH-221ENST00000641573 MASP2O00187 686 aa11.96□□□□□ -0.49
PHGDH-221ENST00000641573 HCRTR2O43614 444 aa11.96□□□□□ -0.49
PHGDH-221ENST00000641573 TP53P04637 393 aaPredicted RBP11.96□□□□□ -0.49
PHGDH-221ENST00000641573 IGFBP1P08833 259 aaPredicted RBP11.96□□□□□ -0.49
PHGDH-221ENST00000641573 ICAM2P13598 275 aa11.96□□□□□ -0.49
PHGDH-221ENST00000641573 PTNP21246 168 aa11.96□□□□□ -0.49
PHGDH-221ENST00000641573 CD82P27701 267 aa11.96□□□□□ -0.49
PHGDH-221ENST00000641573 POU1F1P28069 291 aa11.96□□□□□ -0.49
PHGDH-221ENST00000641573 SLC6A8P48029 635 aa11.96□□□□□ -0.49
PHGDH-221ENST00000641573 GSSP48637 474 aa11.96□□□□□ -0.49
PHGDH-221ENST00000641573 IDH2P48735 452 aaKnown RBP11.96□□□□□ -0.49
PHGDH-221ENST00000641573 TMED10P49755 219 aaKnown RBP11.96□□□□□ -0.49
PHGDH-221ENST00000641573 NUP107P57740 925 aa11.96□□□□□ -0.49
PHGDH-221ENST00000641573 ALDH6A1Q02252 535 aaKnown RBP11.96□□□□□ -0.49
PHGDH-221ENST00000641573 TSPAN31Q12999 210 aa11.96□□□□□ -0.49
PHGDH-221ENST00000641573 IL10RAQ13651 578 aa11.96□□□□□ -0.49
PHGDH-221ENST00000641573 BLMHQ13867 455 aa11.96□□□□□ -0.49
PHGDH-221ENST00000641573 MEP1AQ16819 746 aa11.96□□□□□ -0.49
PHGDH-221ENST00000641573 CTU2Q2VPK5 515 aaKnown RBP11.96□□□□□ -0.49
PHGDH-221ENST00000641573 ALG10BQ5I7T1 473 aa11.96□□□□□ -0.49
PHGDH-221ENST00000641573 WBP2NLQ6ICG8 309 aa11.96□□□□□ -0.49
PHGDH-221ENST00000641573 RAB43Q86YS6 212 aa11.96□□□□□ -0.49
PHGDH-221ENST00000641573 MISPQ8IVT2 679 aa11.96□□□□□ -0.49
PHGDH-221ENST00000641573 DNAJA4Q8WW22 397 aaPredicted RBP11.96□□□□□ -0.49
PHGDH-221ENST00000641573 NKD1Q969G9 470 aa11.96□□□□□ -0.49
PHGDH-221ENST00000641573 MPP4Q96JB8 637 aa11.96□□□□□ -0.49
PHGDH-221ENST00000641573 P4HTMQ9NXG6 502 aa11.96□□□□□ -0.49
PHGDH-221ENST00000641573 CNIH4Q9P003 139 aa11.96□□□□□ -0.49
PHGDH-221ENST00000641573 MRPS18BQ9Y676 258 aaKnown RBP11.96□□□□□ -0.49
PHGDH-221ENST00000641573 SDK2Q58EX2 2172 aa11.96□□□□□ -0.5
PHGDH-221ENST00000641573 TEP1Q99973 2627 aaKnown RBP11.96□□□□□ -0.5
PHGDH-221ENST00000641573 ZAR1LA6NP61 321 aa11.95□□□□□ -0.5
PHGDH-221ENST00000641573 C17orf51A8MQB3 221 aa11.95□□□□□ -0.5
PHGDH-221ENST00000641573 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.95□□□□□ -0.5
PHGDH-221ENST00000641573 H3BN98 237 aa11.95□□□□□ -0.5
PHGDH-221ENST00000641573 ADAM10O14672 748 aa11.95□□□□□ -0.5
PHGDH-221ENST00000641573 EFSO43281 561 aa11.95□□□□□ -0.5
PHGDH-221ENST00000641573 KLF4O43474 513 aa11.95□□□□□ -0.5
PHGDH-221ENST00000641573 ITGA10O75578 1167 aa11.95□□□□□ -0.5
PHGDH-221ENST00000641573 OR6B1O95007 311 aa11.95□□□□□ -0.5
PHGDH-221ENST00000641573 SOX14O95416 240 aa11.95□□□□□ -0.5
PHGDH-221ENST00000641573 IFI30P13284 250 aa11.95□□□□□ -0.5
PHGDH-221ENST00000641573 FPR3P25089 353 aa11.95□□□□□ -0.5
PHGDH-221ENST00000641573 ELK4P28324 431 aa11.95□□□□□ -0.5
PHGDH-221ENST00000641573 SOX3P41225 446 aa11.95□□□□□ -0.5
PHGDH-221ENST00000641573 RBM34P42696 430 aaKnown RBP11.95□□□□□ -0.5
PHGDH-221ENST00000641573 GPR4P46093 362 aa11.95□□□□□ -0.5
PHGDH-221ENST00000641573 PRKCDQ05655 676 aa11.95□□□□□ -0.5
PHGDH-221ENST00000641573 PTGES3Q15185 160 aaKnown RBP11.95□□□□□ -0.5
PHGDH-221ENST00000641573 NTRK2Q16620 822 aa11.95□□□□□ -0.5
PHGDH-221ENST00000641573 FCRLBQ6BAA4 426 aa11.95□□□□□ -0.5
PHGDH-221ENST00000641573 LINC00114Q6XXX2 140 aa11.95□□□□□ -0.5
PHGDH-221ENST00000641573 MRGPREQ86SM8 312 aa11.95□□□□□ -0.5
PHGDH-221ENST00000641573 RPS19BP1Q86WX3 136 aaKnown RBP11.95□□□□□ -0.5
PHGDH-221ENST00000641573 LSRQ86X29 649 aaPredicted RBP11.95□□□□□ -0.5
PHGDH-221ENST00000641573 CCDC71Q8IV32 467 aaPredicted RBP11.95□□□□□ -0.5
PHGDH-221ENST00000641573 OR5W2Q8NH69 310 aa11.95□□□□□ -0.5
PHGDH-221ENST00000641573 PFN4Q8NHR9 129 aa11.95□□□□□ -0.5
PHGDH-221ENST00000641573 DUSP19Q8WTR2 217 aa11.95□□□□□ -0.5
PHGDH-221ENST00000641573 FBLIM1Q8WUP2 373 aa11.95□□□□□ -0.5
PHGDH-221ENST00000641573 RNF138Q8WVD3 245 aa11.95□□□□□ -0.5
PHGDH-221ENST00000641573 C3orf49Q96BT1 292 aa11.95□□□□□ -0.5
PHGDH-221ENST00000641573 SPACA9Q96E40 222 aaPredicted RBP11.95□□□□□ -0.5
PHGDH-221ENST00000641573 YTHDF1Q9BYJ9 559 aaKnown RBP11.95□□□□□ -0.5
PHGDH-221ENST00000641573 SLC25A18Q9H1K4 315 aa11.95□□□□□ -0.5
PHGDH-221ENST00000641573 CDCP1Q9H5V8 836 aa11.95□□□□□ -0.5
PHGDH-221ENST00000641573 TMEM5Q9Y2B1 443 aa11.95□□□□□ -0.5
PHGDH-221ENST00000641573 YARS2Q9Y2Z4 477 aaKnown RBP11.95□□□□□ -0.5
PHGDH-221ENST00000641573 MED31Q9Y3C7 131 aa11.95□□□□□ -0.5
PHGDH-221ENST00000641573 UTP20O75691 2785 aaKnown RBP11.94□□□□□ -0.5
PHGDH-221ENST00000641573 KPNA4O00629 521 aaPredicted RBP11.94□□□□□ -0.5
PHGDH-221ENST00000641573 GMFGO60234 142 aa11.94□□□□□ -0.5
PHGDH-221ENST00000641573 MAN1A2O60476 641 aa11.94□□□□□ -0.5
PHGDH-221ENST00000641573 SMNDC1O75940 238 aaKnown RBP eCLIP11.94□□□□□ -0.5
PHGDH-221ENST00000641573 SERPINA7P05543 415 aa11.94□□□□□ -0.5
PHGDH-221ENST00000641573 SMIM18P0DKX4 95 aa11.94□□□□□ -0.5
PHGDH-221ENST00000641573 P2RX1P51575 399 aa11.94□□□□□ -0.5
PHGDH-221ENST00000641573 CTBP2P56545 445 aa11.94□□□□□ -0.5
PHGDH-221ENST00000641573 MLF1P58340 268 aa11.94□□□□□ -0.5
PHGDH-221ENST00000641573 Q0VFX4 171 aa11.94□□□□□ -0.5
PHGDH-221ENST00000641573 CHAF1BQ13112 559 aa11.94□□□□□ -0.5
PHGDH-221ENST00000641573 CDK5R2Q13319 367 aa11.94□□□□□ -0.5
PHGDH-221ENST00000641573 MAD2L1BPQ15013 274 aaPredicted RBP11.94□□□□□ -0.5
PHGDH-221ENST00000641573 ZNF791Q3KP31 576 aaPredicted RBP11.94□□□□□ -0.5
PHGDH-221ENST00000641573 KCTD21Q4G0X4 260 aa11.94□□□□□ -0.5
PHGDH-221ENST00000641573 C6orf141Q5SZD1 244 aa11.94□□□□□ -0.5
PHGDH-221ENST00000641573 SLX4IPQ5VYV7 408 aa11.94□□□□□ -0.5
PHGDH-221ENST00000641573 TMEM236Q5W0B7 351 aa11.94□□□□□ -0.5
PHGDH-221ENST00000641573 OPN5Q6U736 354 aa11.94□□□□□ -0.5
PHGDH-221ENST00000641573 RASSF6Q6ZTQ3 369 aa11.94□□□□□ -0.5
PHGDH-221ENST00000641573 KIF18BQ86Y91 864 aa11.94□□□□□ -0.5
PHGDH-221ENST00000641573 CDK20Q8IZL9 346 aa11.94□□□□□ -0.5
PHGDH-221ENST00000641573 DEPDC4Q8N2C3 294 aa11.94□□□□□ -0.5
PHGDH-221ENST00000641573 IL22RA1Q8N6P7 574 aa11.94□□□□□ -0.5
PHGDH-221ENST00000641573 OR10G3Q8NGC4 313 aa11.94□□□□□ -0.5
PHGDH-221ENST00000641573 B4GALNT2Q8NHY0 566 aa11.94□□□□□ -0.5
PHGDH-221ENST00000641573 ZNF563Q8TA94 476 aa11.94□□□□□ -0.5
PHGDH-221ENST00000641573 FAM81AQ8TBF8 368 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms