RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 CPNE5Q9HCH3 593 aa8.13□□□□□ -1.11
PHGDH-219ENST00000641513 RASSF1Q9NS23 344 aa8.13□□□□□ -1.11
PHGDH-219ENST00000641513 DNAJB12Q9NXW2 375 aaKnown RBP8.13□□□□□ -1.11
PHGDH-219ENST00000641513 SEC14L4Q9UDX3 406 aa8.13□□□□□ -1.11
PHGDH-219ENST00000641513 CORINQ9Y5Q5 1042 aa8.13□□□□□ -1.11
PHGDH-219ENST00000641513 A0A075B6Q4 140 aa8.12□□□□□ -1.11
PHGDH-219ENST00000641513 PNMA8CA0A1B0GUJ8 204 aa8.12□□□□□ -1.11
PHGDH-219ENST00000641513 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.12□□□□□ -1.11
PHGDH-219ENST00000641513 SPAARA0A1B0GVQ0 90 aa8.12□□□□□ -1.11
PHGDH-219ENST00000641513 M0R082 166 aa8.12□□□□□ -1.11
PHGDH-219ENST00000641513 GNB5O14775 395 aa8.12□□□□□ -1.11
PHGDH-219ENST00000641513 TO15178 435 aa8.12□□□□□ -1.11
PHGDH-219ENST00000641513 SCO2O43819 266 aa8.12□□□□□ -1.11
PHGDH-219ENST00000641513 TSPAN2O60636 221 aa8.12□□□□□ -1.11
PHGDH-219ENST00000641513 FMO6PO60774 539 aa8.12□□□□□ -1.11
PHGDH-219ENST00000641513 ZFAND5O76080 213 aa8.12□□□□□ -1.11
PHGDH-219ENST00000641513 IGHEP01854 428 aa8.12□□□□□ -1.11
PHGDH-219ENST00000641513 LCKP06239 509 aa8.12□□□□□ -1.11
PHGDH-219ENST00000641513 HNRNPCP07910 306 aaKnown RBP eCLIP8.12□□□□□ -1.11
PHGDH-219ENST00000641513 UMODP07911 640 aa8.12□□□□□ -1.11
PHGDH-219ENST00000641513 UBL4AP11441 157 aa8.12□□□□□ -1.11
PHGDH-219ENST00000641513 BMP4P12644 408 aa8.12□□□□□ -1.11
PHGDH-219ENST00000641513 TCN2P20062 427 aa8.12□□□□□ -1.11
PHGDH-219ENST00000641513 TBXA2RP21731 343 aa8.12□□□□□ -1.11
PHGDH-219ENST00000641513 TGM1P22735 817 aa8.12□□□□□ -1.11
PHGDH-219ENST00000641513 MMP11P24347 488 aa8.12□□□□□ -1.11
PHGDH-219ENST00000641513 ABCD3P28288 659 aa8.12□□□□□ -1.11
PHGDH-219ENST00000641513 OTX2P32243 289 aa8.12□□□□□ -1.11
PHGDH-219ENST00000641513 LIPAP38571 399 aa8.12□□□□□ -1.11
PHGDH-219ENST00000641513 GPR4P46093 362 aa8.12□□□□□ -1.11
PHGDH-219ENST00000641513 RGS6P49758 472 aa8.12□□□□□ -1.11
PHGDH-219ENST00000641513 GPR143P51810 404 aa8.12□□□□□ -1.11
PHGDH-219ENST00000641513 PNLIPRP2P54317 469 aa8.12□□□□□ -1.11
PHGDH-219ENST00000641513 RPS15P62841 145 aaKnown RBP8.12□□□□□ -1.11
PHGDH-219ENST00000641513 ST3GAL4Q11206 333 aa8.12□□□□□ -1.11
PHGDH-219ENST00000641513 EIF3IQ13347 325 aaKnown RBP8.12□□□□□ -1.11
PHGDH-219ENST00000641513 TMEM44Q2T9K0 475 aa8.12□□□□□ -1.11
PHGDH-219ENST00000641513 TRIM16LQ309B1 348 aa8.12□□□□□ -1.11
PHGDH-219ENST00000641513 KLHL26Q53HC5 615 aa8.12□□□□□ -1.11
PHGDH-219ENST00000641513 ALG10BQ5I7T1 473 aa8.12□□□□□ -1.11
PHGDH-219ENST00000641513 AGAP7PQ5VUJ5 663 aa8.12□□□□□ -1.11
PHGDH-219ENST00000641513 TMEM236Q5W0B7 351 aa8.12□□□□□ -1.11
PHGDH-219ENST00000641513 DESI1Q6ICB0 168 aa8.12□□□□□ -1.11
PHGDH-219ENST00000641513 C1orf94Q6P1W5 598 aa8.12□□□□□ -1.11
PHGDH-219ENST00000641513 ZNF613Q6PF04 617 aa8.12□□□□□ -1.11
PHGDH-219ENST00000641513 MBOAT2Q6ZWT7 520 aa8.12□□□□□ -1.11
PHGDH-219ENST00000641513 ZER1Q7Z7L7 766 aa8.12□□□□□ -1.11
PHGDH-219ENST00000641513 MRGPREQ86SM8 312 aa8.12□□□□□ -1.11
PHGDH-219ENST00000641513 GRAMD2AQ8IUY3 354 aa8.12□□□□□ -1.11
PHGDH-219ENST00000641513 NRMQ8IXM6 262 aa8.12□□□□□ -1.11
PHGDH-219ENST00000641513 CDK20Q8IZL9 346 aa8.12□□□□□ -1.11
PHGDH-219ENST00000641513 FAM26EQ8N5C1 309 aa8.12□□□□□ -1.11
PHGDH-219ENST00000641513 ZSCAN1Q8NBB4 408 aa8.12□□□□□ -1.11
PHGDH-219ENST00000641513 APCDD1LQ8NCL9 501 aa8.12□□□□□ -1.11
PHGDH-219ENST00000641513 OR5L2Q8NGL0 311 aa8.12□□□□□ -1.11
PHGDH-219ENST00000641513 OR2Y1Q8NGV0 311 aa8.12□□□□□ -1.11
PHGDH-219ENST00000641513 MCFD2Q8NI22 146 aa8.12□□□□□ -1.11
PHGDH-219ENST00000641513 CT55Q8WUE5 264 aa8.12□□□□□ -1.11
PHGDH-219ENST00000641513 ABTB1Q969K4 478 aaPredicted RBP8.12□□□□□ -1.11
PHGDH-219ENST00000641513 TP53INP1Q96A56 240 aa8.12□□□□□ -1.11
PHGDH-219ENST00000641513 PHOX2BQ99453 314 aa8.12□□□□□ -1.11
PHGDH-219ENST00000641513 WDR77Q9BQA1 342 aaPredicted RBP8.12□□□□□ -1.11
PHGDH-219ENST00000641513 TAPBPLQ9BX59 468 aa8.12□□□□□ -1.11
PHGDH-219ENST00000641513 POLDIP3Q9BY77 421 aaKnown RBP8.12□□□□□ -1.11
PHGDH-219ENST00000641513 SEMA4CQ9C0C4 833 aa8.12□□□□□ -1.11
PHGDH-219ENST00000641513 ISYNA1Q9NPH2 558 aa8.12□□□□□ -1.11
PHGDH-219ENST00000641513 MRPS18AQ9NVS2 196 aaKnown RBP8.12□□□□□ -1.11
PHGDH-219ENST00000641513 WDR70Q9NW82 654 aa8.12□□□□□ -1.11
PHGDH-219ENST00000641513 TOR4AQ9NXH8 423 aa8.12□□□□□ -1.11
PHGDH-219ENST00000641513 CNIH4Q9P003 139 aa8.12□□□□□ -1.11
PHGDH-219ENST00000641513 REV1Q9UBZ9 1251 aa8.12□□□□□ -1.11
PHGDH-219ENST00000641513 AASSQ9UDR5 926 aa8.12□□□□□ -1.11
PHGDH-219ENST00000641513 ZNF223Q9UK11 482 aaPredicted RBP8.12□□□□□ -1.11
PHGDH-219ENST00000641513 CARD8Q9Y2G2 431 aa8.12□□□□□ -1.11
PHGDH-219ENST00000641513 RPL36Q9Y3U8 105 aaKnown RBP8.12□□□□□ -1.11
PHGDH-219ENST00000641513 NPFFR2Q9Y5X5 522 aa8.12□□□□□ -1.11
PHGDH-219ENST00000641513 PEX16Q9Y5Y5 336 aa8.12□□□□□ -1.11
PHGDH-219ENST00000641513 PMF1-BGLAPU3KQ54 211 aa8.12□□□□□ -1.11
PHGDH-219ENST00000641513 WDR87Q6ZQQ6 2873 aa8.12□□□□□ -1.11
PHGDH-219ENST00000641513 FRYLO94915 3013 aa8.11□□□□□ -1.11
PHGDH-219ENST00000641513 A0A1B0GWA3 101 aa8.11□□□□□ -1.11
PHGDH-219ENST00000641513 SNTNA6NMZ2 147 aa8.11□□□□□ -1.11
PHGDH-219ENST00000641513 C9orf172C9J069 976 aa8.11□□□□□ -1.11
PHGDH-219ENST00000641513 J3QRK9 145 aa8.11□□□□□ -1.11
PHGDH-219ENST00000641513 CCRL2O00421 344 aa8.11□□□□□ -1.11
PHGDH-219ENST00000641513 ZNF264O43296 627 aa8.11□□□□□ -1.11
PHGDH-219ENST00000641513 OIP5O43482 229 aa8.11□□□□□ -1.11
PHGDH-219ENST00000641513 NDUFB5O43674 189 aa8.11□□□□□ -1.11
PHGDH-219ENST00000641513 FOXD2O60548 495 aaPredicted RBP8.11□□□□□ -1.11
PHGDH-219ENST00000641513 PPM1BO75688 479 aa8.11□□□□□ -1.11
PHGDH-219ENST00000641513 TNFSF15O95150 251 aa8.11□□□□□ -1.11
PHGDH-219ENST00000641513 NUDT14O95848 222 aa8.11□□□□□ -1.11
PHGDH-219ENST00000641513 PTTG1O95997 202 aa8.11□□□□□ -1.11
PHGDH-219ENST00000641513 THY1P04216 161 aa8.11□□□□□ -1.11
PHGDH-219ENST00000641513 SCG5P05408 212 aa8.11□□□□□ -1.11
PHGDH-219ENST00000641513 IGFBP1P08833 259 aaPredicted RBP8.11□□□□□ -1.11
PHGDH-219ENST00000641513 FTH1P19P0C7X4 201 aa8.11□□□□□ -1.11
PHGDH-219ENST00000641513 GAAP10253 952 aa8.11□□□□□ -1.11
PHGDH-219ENST00000641513 IMPDH2P12268 514 aa8.11□□□□□ -1.11
PHGDH-219ENST00000641513 IFI30P13284 250 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms