RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 OR52D1Q9H346 318 aa8.9□□□□□ -0.98
PHGDH-215ENST00000641371 CHCHD3Q9NX63 227 aaKnown RBP8.9□□□□□ -0.98
PHGDH-215ENST00000641371 TVP23BQ9NYZ1 205 aa8.9□□□□□ -0.98
PHGDH-215ENST00000641371 CNIH4Q9P003 139 aa8.9□□□□□ -0.98
PHGDH-215ENST00000641371 PISDQ9UG56 409 aa8.9□□□□□ -0.98
PHGDH-215ENST00000641371 KLHL21Q9UJP4 597 aa8.9□□□□□ -0.98
PHGDH-215ENST00000641371 FARSAQ9Y285 508 aaKnown RBP8.9□□□□□ -0.98
PHGDH-215ENST00000641371 SIGLEC7Q9Y286 467 aa8.9□□□□□ -0.98
PHGDH-215ENST00000641371 YARS2Q9Y2Z4 477 aaKnown RBP8.9□□□□□ -0.98
PHGDH-215ENST00000641371 CEPT1Q9Y6K0 416 aa8.9□□□□□ -0.98
PHGDH-215ENST00000641371 IGLV3-32A0A0A0MS00 114 aa8.89□□□□□ -0.99
PHGDH-215ENST00000641371 ANKUB1A6NFN9 424 aa8.89□□□□□ -0.99
PHGDH-215ENST00000641371 ENO4A6NNW6 628 aa8.89□□□□□ -0.99
PHGDH-215ENST00000641371 RIIAD1A6NNX1 92 aa8.89□□□□□ -0.99
PHGDH-215ENST00000641371 KDM4EB2RXH2 506 aaPredicted RBP8.89□□□□□ -0.99
PHGDH-215ENST00000641371 IMPA2O14732 288 aa8.89□□□□□ -0.99
PHGDH-215ENST00000641371 SURF4O15260 269 aa8.89□□□□□ -0.99
PHGDH-215ENST00000641371 TLX2O43763 284 aaPredicted RBP8.89□□□□□ -0.99
PHGDH-215ENST00000641371 OR7A10O76100 309 aa8.89□□□□□ -0.99
PHGDH-215ENST00000641371 HPP00738 406 aa8.89□□□□□ -0.99
PHGDH-215ENST00000641371 MT-ATP6P00846 226 aa8.89□□□□□ -0.99
PHGDH-215ENST00000641371 COX6A1P12074 109 aa8.89□□□□□ -0.99
PHGDH-215ENST00000641371 ZNF3P17036 446 aa8.89□□□□□ -0.99
PHGDH-215ENST00000641371 PCMT1P22061 227 aa8.89□□□□□ -0.99
PHGDH-215ENST00000641371 CXCR1P25024 350 aa8.89□□□□□ -0.99
PHGDH-215ENST00000641371 ITPKBP27987 946 aa8.89□□□□□ -0.99
PHGDH-215ENST00000641371 EMX1Q04741 257 aaPredicted RBP8.89□□□□□ -0.99
PHGDH-215ENST00000641371 CRYZQ08257 329 aaKnown RBP8.89□□□□□ -0.99
PHGDH-215ENST00000641371 FOXD4Q12950 439 aaPredicted RBP8.89□□□□□ -0.99
PHGDH-215ENST00000641371 C1DQ13901 141 aaKnown RBP8.89□□□□□ -0.99
PHGDH-215ENST00000641371 TRIP6Q15654 476 aaKnown RBP8.89□□□□□ -0.99
PHGDH-215ENST00000641371 CD226Q15762 336 aa8.89□□□□□ -0.99
PHGDH-215ENST00000641371 BTBD16Q32M84 506 aa8.89□□□□□ -0.99
PHGDH-215ENST00000641371 TIMM50Q3ZCQ8 353 aa8.89□□□□□ -0.99
PHGDH-215ENST00000641371 NXNL2Q5VZ03 156 aa8.89□□□□□ -0.99
PHGDH-215ENST00000641371 TMEM236Q5W0B7 351 aa8.89□□□□□ -0.99
PHGDH-215ENST00000641371 GTF2IRD2BQ6EKJ0 949 aa8.89□□□□□ -0.99
PHGDH-215ENST00000641371 XAF1Q6GPH4 301 aa8.89□□□□□ -0.99
PHGDH-215ENST00000641371 ISLR2Q6UXK2 745 aa8.89□□□□□ -0.99
PHGDH-215ENST00000641371 Q6ZPB1 254 aaPredicted RBP8.89□□□□□ -0.99
PHGDH-215ENST00000641371 GTF2IRD2Q86UP8 949 aa8.89□□□□□ -0.99
PHGDH-215ENST00000641371 KIF18BQ86Y91 864 aa8.89□□□□□ -0.99
PHGDH-215ENST00000641371 RAB43Q86YS6 212 aa8.89□□□□□ -0.99
PHGDH-215ENST00000641371 PRR22Q8IZ63 422 aa8.89□□□□□ -0.99
PHGDH-215ENST00000641371 GGHQ92820 318 aa8.89□□□□□ -0.99
PHGDH-215ENST00000641371 HGDQ93099 445 aa8.89□□□□□ -0.99
PHGDH-215ENST00000641371 SPACA9Q96E40 222 aaPredicted RBP8.89□□□□□ -0.99
PHGDH-215ENST00000641371 TMEM80Q96HE8 168 aa8.89□□□□□ -0.99
PHGDH-215ENST00000641371 LRR1Q96L50 414 aa8.89□□□□□ -0.99
PHGDH-215ENST00000641371 IL4I1Q96RQ9 567 aa8.89□□□□□ -0.99
PHGDH-215ENST00000641371 GPX7Q96SL4 187 aaPredicted RBP8.89□□□□□ -0.99
PHGDH-215ENST00000641371 TSC22D3Q99576 134 aa8.89□□□□□ -0.99
PHGDH-215ENST00000641371 GPA33Q99795 319 aa8.89□□□□□ -0.99
PHGDH-215ENST00000641371 DPH1Q9BZG8 443 aa8.89□□□□□ -0.99
PHGDH-215ENST00000641371 UBQLN3Q9H347 655 aa8.89□□□□□ -0.99
PHGDH-215ENST00000641371 EGLN3Q9H6Z9 239 aa8.89□□□□□ -0.99
PHGDH-215ENST00000641371 FKRPQ9H9S5 495 aa8.89□□□□□ -0.99
PHGDH-215ENST00000641371 CPNE5Q9HCH3 593 aa8.89□□□□□ -0.99
PHGDH-215ENST00000641371 ACOT13Q9NPJ3 140 aa8.89□□□□□ -0.99
PHGDH-215ENST00000641371 CMC2Q9NRP2 79 aa8.89□□□□□ -0.99
PHGDH-215ENST00000641371 TAS2R10Q9NYW0 307 aa8.89□□□□□ -0.99
PHGDH-215ENST00000641371 ZNF229Q9UJW7 825 aa8.89□□□□□ -0.99
PHGDH-215ENST00000641371 TCFL5Q9UL49 500 aa8.89□□□□□ -0.99
PHGDH-215ENST00000641371 ERGIC3Q9Y282 383 aa8.89□□□□□ -0.99
PHGDH-215ENST00000641371 CARD8Q9Y2G2 431 aa8.89□□□□□ -0.99
PHGDH-215ENST00000641371 NTNG1Q9Y2I2 539 aa8.89□□□□□ -0.99
PHGDH-215ENST00000641371 EXOSC1Q9Y3B2 195 aaKnown RBP8.89□□□□□ -0.99
PHGDH-215ENST00000641371 SPIN1Q9Y657 262 aaPredicted RBP8.89□□□□□ -0.99
PHGDH-215ENST00000641371 LAMA1P25391 3075 aa8.89□□□□□ -0.99
PHGDH-215ENST00000641371 IGHV3-20A0A0C4DH32 117 aa8.88□□□□□ -0.99
PHGDH-215ENST00000641371 PCNX2A6NKB5 2137 aa8.88□□□□□ -0.99
PHGDH-215ENST00000641371 SLC22A31A6NKX4 558 aa8.88□□□□□ -0.99
PHGDH-215ENST00000641371 BHLHE40O14503 412 aa8.88□□□□□ -0.99
PHGDH-215ENST00000641371 ARPC3O15145 178 aa8.88□□□□□ -0.99
PHGDH-215ENST00000641371 OR2T1O43869 369 aa8.88□□□□□ -0.99
PHGDH-215ENST00000641371 PIP5K1CO60331 668 aa8.88□□□□□ -0.99
PHGDH-215ENST00000641371 PTP4A3O75365 173 aa8.88□□□□□ -0.99
PHGDH-215ENST00000641371 DKK1O94907 266 aa8.88□□□□□ -0.99
PHGDH-215ENST00000641371 NADKO95544 446 aaPredicted RBP8.88□□□□□ -0.99
PHGDH-215ENST00000641371 RAB36O95755 333 aa8.88□□□□□ -0.99
PHGDH-215ENST00000641371 NUDT14O95848 222 aa8.88□□□□□ -0.99
PHGDH-215ENST00000641371 FADS2O95864 444 aaKnown RBP8.88□□□□□ -0.99
PHGDH-215ENST00000641371 MT-ND2P03891 347 aa8.88□□□□□ -0.99
PHGDH-215ENST00000641371 HIST1H2ABP04908 130 aa8.88□□□□□ -0.99
PHGDH-215ENST00000641371 UMODP07911 640 aa8.88□□□□□ -0.99
PHGDH-215ENST00000641371 HTR1AP08908 422 aa8.88□□□□□ -0.99
PHGDH-215ENST00000641371 ATXN8OSP0DMR3 200 aa8.88□□□□□ -0.99
PHGDH-215ENST00000641371 DBTP11182 482 aaKnown RBP8.88□□□□□ -0.99
PHGDH-215ENST00000641371 PEPDP12955 493 aa8.88□□□□□ -0.99
PHGDH-215ENST00000641371 MYL12AP19105 171 aa8.88□□□□□ -0.99
PHGDH-215ENST00000641371 HK1P19367 917 aa8.88□□□□□ -0.99
PHGDH-215ENST00000641371 TCN2P20062 427 aa8.88□□□□□ -0.99
PHGDH-215ENST00000641371 FUT4P22083 530 aa8.88□□□□□ -0.99
PHGDH-215ENST00000641371 HTR1FP30939 366 aa8.88□□□□□ -0.99
PHGDH-215ENST00000641371 APOBEC1P41238 236 aaKnown RBP8.88□□□□□ -0.99
PHGDH-215ENST00000641371 NBL1P41271 181 aa8.88□□□□□ -0.99
PHGDH-215ENST00000641371 ZNF117Q03924 483 aa8.88□□□□□ -0.99
PHGDH-215ENST00000641371 ZNF91Q05481 1191 aa8.88□□□□□ -0.99
PHGDH-215ENST00000641371 LGALS3BPQ08380 585 aa8.88□□□□□ -0.99
PHGDH-215ENST00000641371 ST3GAL4Q11206 333 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms