RNA–Protein interactions for RNA: ENST00000640554.1

SDHD-209, Transcript of succinate dehydrogenase complex subunit D, human

TSL 5

Gene SDHD, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SDHD-209	ENST00000640554	EPS8	Q12929	822 aa		12.78	□□□□□ -0.36
SDHD-209	ENST00000640554	NFYC	Q13952	458 aa		12.78	□□□□□ -0.36
SDHD-209	ENST00000640554	ZNF311	Q5JNZ3	666 aa		12.78	□□□□□ -0.36
SDHD-209	ENST00000640554	CNEP1R1	Q8N9A8	125 aa		12.78	□□□□□ -0.36
SDHD-209	ENST00000640554	PCYOX1L	Q8NBM8	494 aa		12.78	□□□□□ -0.36
SDHD-209	ENST00000640554	FAM222B	Q8WU58	562 aa		12.78	□□□□□ -0.36
SDHD-209	ENST00000640554	CCDC106	Q9BWC9	280 aa		12.78	□□□□□ -0.36
SDHD-209	ENST00000640554	RBM24	Q9BX46	236 aa	Known RBP	12.78	□□□□□ -0.36
SDHD-209	ENST00000640554	TRIM8	Q9BZR9	551 aa		12.78	□□□□□ -0.36
SDHD-209	ENST00000640554	SAR1A	Q9NR31	198 aa		12.78	□□□□□ -0.36
SDHD-209	ENST00000640554	ELOVL5	Q9NYP7	299 aa		12.78	□□□□□ -0.36
SDHD-209	ENST00000640554	CHRNA9	Q9UGM1	479 aa		12.78	□□□□□ -0.36
SDHD-209	ENST00000640554	ZNF443	Q9Y2A4	671 aa	Predicted RBP	12.78	□□□□□ -0.36
SDHD-209	ENST00000640554	HDGFL3	Q9Y3E1	203 aa		12.78	□□□□□ -0.36
SDHD-209	ENST00000640554	CENPE	Q02224	2701 aa		12.77	□□□□□ -0.36
SDHD-209	ENST00000640554	CLDN24	A6NM45	220 aa		12.77	□□□□□ -0.37
SDHD-209	ENST00000640554	ZNF208	O43345	1280 aa		12.77	□□□□□ -0.37
SDHD-209	ENST00000640554	SS18L1	O75177	396 aa	Predicted RBP	12.77	□□□□□ -0.37
SDHD-209	ENST00000640554	AQP8	O94778	261 aa		12.77	□□□□□ -0.37
SDHD-209	ENST00000640554	PRKD3	O94806	890 aa		12.77	□□□□□ -0.37
SDHD-209	ENST00000640554	GOSR1	O95249	250 aa		12.77	□□□□□ -0.37
SDHD-209	ENST00000640554	OPN1LW	P04000	364 aa		12.77	□□□□□ -0.37
SDHD-209	ENST00000640554	NUDT7	P0C024	238 aa		12.77	□□□□□ -0.37
SDHD-209	ENST00000640554	PRKAR1B	P31321	381 aa		12.77	□□□□□ -0.37
SDHD-209	ENST00000640554	CPA2	P48052	419 aa		12.77	□□□□□ -0.37
SDHD-209	ENST00000640554	POLR2H	P52434	150 aa	Known RBP	12.77	□□□□□ -0.37
SDHD-209	ENST00000640554	AGFG1	P52594	562 aa	Known RBP	12.77	□□□□□ -0.37
SDHD-209	ENST00000640554	KLF10	Q13118	480 aa		12.77	□□□□□ -0.37
SDHD-209	ENST00000640554	GUSBP1	Q15486	140 aa		12.77	□□□□□ -0.37
SDHD-209	ENST00000640554	ZNF239	Q16600	458 aa	Known RBP	12.77	□□□□□ -0.37
SDHD-209	ENST00000640554	MMEL1	Q495T6	779 aa		12.77	□□□□□ -0.37
SDHD-209	ENST00000640554	SYT14P1	Q58G82	188 aa		12.77	□□□□□ -0.37
SDHD-209	ENST00000640554	CGB2	Q6NT52	195 aa		12.77	□□□□□ -0.37
SDHD-209	ENST00000640554	TMPPE	Q6ZT21	453 aa		12.77	□□□□□ -0.37
SDHD-209	ENST00000640554	RETREG3	Q86VR2	466 aa		12.77	□□□□□ -0.37
SDHD-209	ENST00000640554	VRK2	Q86Y07	508 aa		12.77	□□□□□ -0.37
SDHD-209	ENST00000640554	ZNF295-AS1	Q8N0V1	137 aa		12.77	□□□□□ -0.37
SDHD-209	ENST00000640554	C11orf65	Q8NCR3	313 aa		12.77	□□□□□ -0.37
SDHD-209	ENST00000640554	HIPK4	Q8NE63	616 aa		12.77	□□□□□ -0.37
SDHD-209	ENST00000640554	OR6K3	Q8NGY3	331 aa		12.77	□□□□□ -0.37
SDHD-209	ENST00000640554	ZHX1-C8orf76	Q96EF9	292 aa		12.77	□□□□□ -0.37
SDHD-209	ENST00000640554	ZNF559	Q9BR84	538 aa		12.77	□□□□□ -0.37
SDHD-209	ENST00000640554	CPPED1	Q9BRF8	314 aa	Predicted RBP	12.77	□□□□□ -0.37
SDHD-209	ENST00000640554	ADAM19	Q9H013	955 aa		12.77	□□□□□ -0.37
SDHD-209	ENST00000640554	MCCC2	Q9HCC0	563 aa		12.77	□□□□□ -0.37
SDHD-209	ENST00000640554	PLSCR4	Q9NRQ2	329 aa		12.77	□□□□□ -0.37
SDHD-209	ENST00000640554	GID8	Q9NWU2	228 aa		12.77	□□□□□ -0.37
SDHD-209	ENST00000640554	TRAPPC4	Q9Y296	219 aa		12.77	□□□□□ -0.37
SDHD-209	ENST00000640554	TUBAL3	A6NHL2	446 aa		12.76	□□□□□ -0.37
SDHD-209	ENST00000640554	DYNC1I1	O14576	645 aa		12.76	□□□□□ -0.37
SDHD-209	ENST00000640554	SCARB2	Q14108	478 aa		12.76	□□□□□ -0.37
SDHD-209	ENST00000640554	TRMT5	Q32P41	509 aa	Known RBP	12.76	□□□□□ -0.37
SDHD-209	ENST00000640554	WBP2NL	Q6ICG8	309 aa		12.76	□□□□□ -0.37
SDHD-209	ENST00000640554	PPP4R4	Q6NUP7	873 aa		12.76	□□□□□ -0.37
SDHD-209	ENST00000640554	DHRS4L2	Q6PKH6	230 aa		12.76	□□□□□ -0.37
SDHD-209	ENST00000640554	ZNF836	Q6ZNA1	936 aa		12.76	□□□□□ -0.37
SDHD-209	ENST00000640554	FCRLA	Q7L513	359 aa		12.76	□□□□□ -0.37
SDHD-209	ENST00000640554	BTLA	Q7Z6A9	289 aa		12.76	□□□□□ -0.37
SDHD-209	ENST00000640554	SERPINA11	Q86U17	422 aa		12.76	□□□□□ -0.37
SDHD-209	ENST00000640554	STK32C	Q86UX6	486 aa		12.76	□□□□□ -0.37
SDHD-209	ENST00000640554	ADGRG3	Q86Y34	549 aa		12.76	□□□□□ -0.37
SDHD-209	ENST00000640554	ATP6V1C2	Q8NEY4	427 aa		12.76	□□□□□ -0.37
SDHD-209	ENST00000640554	RNF128	Q8TEB7	428 aa		12.76	□□□□□ -0.37
SDHD-209	ENST00000640554	MAL2	Q969L2	176 aa		12.76	□□□□□ -0.37
SDHD-209	ENST00000640554	ZNF524	Q96C55	264 aa		12.76	□□□□□ -0.37
SDHD-209	ENST00000640554	DDIT4L	Q96D03	193 aa		12.76	□□□□□ -0.37
SDHD-209	ENST00000640554	OR5B2	Q96R09	309 aa		12.76	□□□□□ -0.37
SDHD-209	ENST00000640554	NSRP1	Q9H0G5	558 aa	Known RBP	12.76	□□□□□ -0.37
SDHD-209	ENST00000640554	KAT8	Q9H7Z6	458 aa	Known RBP	12.76	□□□□□ -0.37
SDHD-209	ENST00000640554	CTPS2	Q9NRF8	586 aa		12.76	□□□□□ -0.37
SDHD-209	ENST00000640554	RLIM	Q9NVW2	624 aa		12.76	□□□□□ -0.37
SDHD-209	ENST00000640554	KLHL9	Q9P2J3	617 aa		12.76	□□□□□ -0.37
SDHD-209	ENST00000640554	NDRG3	Q9UGV2	375 aa		12.76	□□□□□ -0.37
SDHD-209	ENST00000640554	PROCR	Q9UNN8	238 aa		12.76	□□□□□ -0.37
SDHD-209	ENST00000640554	ANGPT4	Q9Y264	503 aa		12.76	□□□□□ -0.37
SDHD-209	ENST00000640554	AP3M1	Q9Y2T2	418 aa		12.76	□□□□□ -0.37
SDHD-209	ENST00000640554	CAPN7	Q9Y6W3	813 aa		12.76	□□□□□ -0.37
SDHD-209	ENST00000640554	CELSR2	Q9HCU4	2923 aa		12.76	□□□□□ -0.37
SDHD-209	ENST00000640554	TMED7-TICAM2	A0A0A6YYA0	188 aa		12.75	□□□□□ -0.37
SDHD-209	ENST00000640554	CYSRT1	A8MQ03	144 aa		12.75	□□□□□ -0.37
SDHD-209	ENST00000640554	SULT2B1	O00204	365 aa		12.75	□□□□□ -0.37
SDHD-209	ENST00000640554	EIF1B	O60739	113 aa	Known RBP	12.75	□□□□□ -0.37
SDHD-209	ENST00000640554	BCAS1	O75363	584 aa	Predicted RBP	12.75	□□□□□ -0.37
SDHD-209	ENST00000640554	SMNDC1	O75940	238 aa	Known RBP eCLIP	12.75	□□□□□ -0.37
SDHD-209	ENST00000640554	PMS2P2	O95744	297 aa		12.75	□□□□□ -0.37
SDHD-209	ENST00000640554	CGA	P01215	116 aa		12.75	□□□□□ -0.37
SDHD-209	ENST00000640554	TFPI	P10646	304 aa		12.75	□□□□□ -0.37
SDHD-209	ENST00000640554	ENPP1	P22413	925 aa		12.75	□□□□□ -0.37
SDHD-209	ENST00000640554	CXCR1	P25024	350 aa		12.75	□□□□□ -0.37
SDHD-209	ENST00000640554	SHC1	P29353	583 aa		12.75	□□□□□ -0.37
SDHD-209	ENST00000640554	ACAA2	P42765	397 aa	Known RBP	12.75	□□□□□ -0.37
SDHD-209	ENST00000640554	DIO1	P49895	249 aa		12.75	□□□□□ -0.37
SDHD-209	ENST00000640554	PLAUR	Q03405	335 aa		12.75	□□□□□ -0.37
SDHD-209	ENST00000640554	NOTCH2	Q04721	2471 aa		12.75	□□□□□ -0.37
SDHD-209	ENST00000640554	TLE4	Q04727	773 aa		12.75	□□□□□ -0.37
SDHD-209	ENST00000640554	MYBPH	Q13203	477 aa		12.75	□□□□□ -0.37
SDHD-209	ENST00000640554	PDK3	Q15120	406 aa		12.75	□□□□□ -0.37
SDHD-209	ENST00000640554	ADRM1	Q16186	407 aa		12.75	□□□□□ -0.37
SDHD-209	ENST00000640554	CYP51A1	Q16850	503 aa		12.75	□□□□□ -0.37
SDHD-209	ENST00000640554	RPS26P11	Q5JNZ5	115 aa	Predicted RBP	12.75	□□□□□ -0.37

Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms