RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 TP63Q9H3D4 680 aaPredicted RBP11.89□□□□□ -0.51
GTF3A-209ENST00000640289 ADPRHL2Q9NX46 363 aa11.89□□□□□ -0.51
GTF3A-209ENST00000640289 TESQ9UGI8 421 aaKnown RBP11.89□□□□□ -0.51
GTF3A-209ENST00000640289 MAGEL2Q9UJ55 1249 aa11.89□□□□□ -0.51
GTF3A-209ENST00000640289 FAM215AQ9Y5M1 114 aa11.89□□□□□ -0.51
GTF3A-209ENST00000640289 SNX13Q9Y5W8 968 aa11.89□□□□□ -0.51
GTF3A-209ENST00000640289 PCNX3Q9H6A9 2034 aa11.89□□□□□ -0.51
GTF3A-209ENST00000640289 ZNF462Q96JM2 2506 aa11.88□□□□□ -0.51
GTF3A-209ENST00000640289 TMED7-TICAM2A0A0A6YYA0 188 aa11.88□□□□□ -0.51
GTF3A-209ENST00000640289 A0A0J9YW62 118 aa11.88□□□□□ -0.51
GTF3A-209ENST00000640289 A0A1B0GWA3 101 aa11.88□□□□□ -0.51
GTF3A-209ENST00000640289 FIGNL2A6NMB9 653 aa11.88□□□□□ -0.51
GTF3A-209ENST00000640289 CPSF4LA6NMK7 179 aaKnown RBP11.88□□□□□ -0.51
GTF3A-209ENST00000640289 EIF1AYO14602 144 aaKnown RBP11.88□□□□□ -0.51
GTF3A-209ENST00000640289 LRRTM2O43300 516 aa11.88□□□□□ -0.51
GTF3A-209ENST00000640289 WDR1O75083 606 aa11.88□□□□□ -0.51
GTF3A-209ENST00000640289 GMNNO75496 209 aa11.88□□□□□ -0.51
GTF3A-209ENST00000640289 ATP6V1B2P21281 511 aa11.88□□□□□ -0.51
GTF3A-209ENST00000640289 ME2P23368 584 aa11.88□□□□□ -0.51
GTF3A-209ENST00000640289 HTR3AP46098 478 aa11.88□□□□□ -0.51
GTF3A-209ENST00000640289 POLR2HP52434 150 aaKnown RBP11.88□□□□□ -0.51
GTF3A-209ENST00000640289 CASP6P55212 293 aa11.88□□□□□ -0.51
GTF3A-209ENST00000640289 NCALDP61601 193 aa11.88□□□□□ -0.51
GTF3A-209ENST00000640289 MS4A2Q01362 244 aa11.88□□□□□ -0.51
GTF3A-209ENST00000640289 BNIP2Q12982 314 aa11.88□□□□□ -0.51
GTF3A-209ENST00000640289 OR1Q1Q15612 314 aa11.88□□□□□ -0.51
GTF3A-209ENST00000640289 BCL2A1Q16548 175 aa11.88□□□□□ -0.51
GTF3A-209ENST00000640289 CTU2Q2VPK5 515 aaKnown RBP11.88□□□□□ -0.51
GTF3A-209ENST00000640289 TMEM176BQ3YBM2 270 aaPredicted RBP11.88□□□□□ -0.51
GTF3A-209ENST00000640289 C3orf33Q6P1S2 294 aa11.88□□□□□ -0.51
GTF3A-209ENST00000640289 CYP2R1Q6VVX0 501 aa11.88□□□□□ -0.51
GTF3A-209ENST00000640289 DEF8Q6ZN54 512 aa11.88□□□□□ -0.51
GTF3A-209ENST00000640289 RANBP3LQ86VV4 465 aaPredicted RBP11.88□□□□□ -0.51
GTF3A-209ENST00000640289 TSPYL5Q86VY4 417 aaPredicted RBP11.88□□□□□ -0.51
GTF3A-209ENST00000640289 MEIOBQ8N635 442 aa11.88□□□□□ -0.51
GTF3A-209ENST00000640289 FAM86B1Q8N7N1 296 aa11.88□□□□□ -0.51
GTF3A-209ENST00000640289 LSMEM1Q8N8F7 131 aa11.88□□□□□ -0.51
GTF3A-209ENST00000640289 LZICQ8WZA0 190 aa11.88□□□□□ -0.51
GTF3A-209ENST00000640289 CCDC124Q96CT7 223 aaKnown RBP11.88□□□□□ -0.51
GTF3A-209ENST00000640289 DNAJA3Q96EY1 480 aa11.88□□□□□ -0.51
GTF3A-209ENST00000640289 ZNF845Q96IR2 970 aaPredicted RBP11.88□□□□□ -0.51
GTF3A-209ENST00000640289 ADGRG7Q96K78 797 aa11.88□□□□□ -0.51
GTF3A-209ENST00000640289 ZNF559Q9BR84 538 aa11.88□□□□□ -0.51
GTF3A-209ENST00000640289 CADM1Q9BY67 442 aaKnown RBP11.88□□□□□ -0.51
GTF3A-209ENST00000640289 EVA1AQ9H8M9 152 aa11.88□□□□□ -0.51
GTF3A-209ENST00000640289 GORASP2Q9H8Y8 452 aa11.88□□□□□ -0.51
GTF3A-209ENST00000640289 DCAF13Q9NV06 445 aaKnown RBP11.88□□□□□ -0.51
GTF3A-209ENST00000640289 RPS6KB2Q9UBS0 482 aa11.88□□□□□ -0.51
GTF3A-209ENST00000640289 CHRNA9Q9UGM1 479 aa11.88□□□□□ -0.51
GTF3A-209ENST00000640289 SLC9A8Q9Y2E8 581 aa11.88□□□□□ -0.51
GTF3A-209ENST00000640289 TMED7Q9Y3B3 224 aa11.88□□□□□ -0.51
GTF3A-209ENST00000640289 A0A1W2PNR3 127 aa11.87□□□□□ -0.51
GTF3A-209ENST00000640289 CLCA1A8K7I4 914 aa11.87□□□□□ -0.51
GTF3A-209ENST00000640289 AHRRA9YTQ3 701 aa11.87□□□□□ -0.51
GTF3A-209ENST00000640289 EBAG9O00559 213 aa11.87□□□□□ -0.51
GTF3A-209ENST00000640289 CCL21O00585 134 aa11.87□□□□□ -0.51
GTF3A-209ENST00000640289 TNFSF11O14788 317 aa11.87□□□□□ -0.51
GTF3A-209ENST00000640289 GSC2O15499 205 aa11.87□□□□□ -0.51
GTF3A-209ENST00000640289 SEMA7AO75326 666 aa11.87□□□□□ -0.51
GTF3A-209ENST00000640289 DNAJC8O75937 253 aaPredicted RBP11.87□□□□□ -0.51
GTF3A-209ENST00000640289 ATP5HO75947 161 aa11.87□□□□□ -0.51
GTF3A-209ENST00000640289 GABRA1P14867 456 aa11.87□□□□□ -0.51
GTF3A-209ENST00000640289 ACVR2AP27037 513 aa11.87□□□□□ -0.51
GTF3A-209ENST00000640289 TRIM25Q14258 630 aaKnown RBP11.87□□□□□ -0.51
GTF3A-209ENST00000640289 ACSF3Q4G176 576 aaPredicted RBP11.87□□□□□ -0.51
GTF3A-209ENST00000640289 C4orf17Q53FE4 359 aa11.87□□□□□ -0.51
GTF3A-209ENST00000640289 ENTPD8Q5MY95 495 aa11.87□□□□□ -0.51
GTF3A-209ENST00000640289 C1orf185Q5T7R7 199 aa11.87□□□□□ -0.51
GTF3A-209ENST00000640289 PGM2L1Q6PCE3 622 aa11.87□□□□□ -0.51
GTF3A-209ENST00000640289 RPTNQ6XPR3 784 aa11.87□□□□□ -0.51
GTF3A-209ENST00000640289 CCDC121Q6ZUS5 278 aa11.87□□□□□ -0.51
GTF3A-209ENST00000640289 FKBP9P1Q75LS8 142 aa11.87□□□□□ -0.51
GTF3A-209ENST00000640289 ATG4DQ86TL0 474 aaPredicted RBP11.87□□□□□ -0.51
GTF3A-209ENST00000640289 MARVELD2Q8N4S9 558 aa11.87□□□□□ -0.51
GTF3A-209ENST00000640289 ZPLD1Q8TCW7 415 aa11.87□□□□□ -0.51
GTF3A-209ENST00000640289 PHF10Q8WUB8 498 aaKnown RBP11.87□□□□□ -0.51
GTF3A-209ENST00000640289 KLHL15Q96M94 604 aa11.87□□□□□ -0.51
GTF3A-209ENST00000640289 NSMCE2Q96MF7 247 aa11.87□□□□□ -0.51
GTF3A-209ENST00000640289 TRIB1Q96RU8 372 aa11.87□□□□□ -0.51
GTF3A-209ENST00000640289 TRIM2Q9C040 744 aa11.87□□□□□ -0.51
GTF3A-209ENST00000640289 OR11A1Q9GZK7 315 aa11.87□□□□□ -0.51
GTF3A-209ENST00000640289 COQ10BQ9H8M1 238 aa11.87□□□□□ -0.51
GTF3A-209ENST00000640289 TMEM27Q9HBJ8 222 aa11.87□□□□□ -0.51
GTF3A-209ENST00000640289 SERINC1Q9NRX5 453 aa11.87□□□□□ -0.51
GTF3A-209ENST00000640289 ERRFI1Q9UJM3 462 aaPredicted RBP11.87□□□□□ -0.51
GTF3A-209ENST00000640289 RPS6KA6Q9UK32 745 aa11.87□□□□□ -0.51
GTF3A-209ENST00000640289 MEMO1Q9Y316 297 aa11.87□□□□□ -0.51
GTF3A-209ENST00000640289 V9GYQ6 96 aa11.87□□□□□ -0.51
GTF3A-209ENST00000640289 ZNF407Q9C0G0 2248 aa11.86□□□□□ -0.51
GTF3A-209ENST00000640289 A0A0B4J2E0 115 aa11.86□□□□□ -0.51
GTF3A-209ENST00000640289 A0A1B0GX12 115 aa11.86□□□□□ -0.51
GTF3A-209ENST00000640289 ZC3H12DA2A288 527 aaKnown RBP11.86□□□□□ -0.51
GTF3A-209ENST00000640289 E9PLN8 166 aa11.86□□□□□ -0.51
GTF3A-209ENST00000640289 CXCL13O43927 109 aa11.86□□□□□ -0.51
GTF3A-209ENST00000640289 FMO6PO60774 539 aa11.86□□□□□ -0.51
GTF3A-209ENST00000640289 PRKD3O94806 890 aa11.86□□□□□ -0.51
GTF3A-209ENST00000640289 THY1P04216 161 aa11.86□□□□□ -0.51
GTF3A-209ENST00000640289 TFPIP10646 304 aa11.86□□□□□ -0.51
GTF3A-209ENST00000640289 PTNP21246 168 aa11.86□□□□□ -0.51
GTF3A-209ENST00000640289 CXCR1P25024 350 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms