RNA–Protein interactions for RNA: ENST00000640036.1

SCN1A-218, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN1A, Length 8,131 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-218ENST00000640036 CCDC32Q9BV29 185 aa4.68□□□□□ -1.66
SCN1A-218ENST00000640036 ZNF442Q9H7R0 627 aa4.68□□□□□ -1.66
SCN1A-218ENST00000640036 MARCH7Q9H992 704 aa4.68□□□□□ -1.66
SCN1A-218ENST00000640036 CRLF2Q9HC73 371 aa4.68□□□□□ -1.66
SCN1A-218ENST00000640036 TMEM100Q9NV29 134 aa4.68□□□□□ -1.66
SCN1A-218ENST00000640036 NPFFR2Q9Y5X5 522 aa4.68□□□□□ -1.66
SCN1A-218ENST00000640036 RAB19A4D1S5 217 aa4.68□□□□□ -1.66
SCN1A-218ENST00000640036 CBR3O75828 277 aa4.68□□□□□ -1.66
SCN1A-218ENST00000640036 HTR1AP08908 422 aa4.68□□□□□ -1.66
SCN1A-218ENST00000640036 UQCRFS1P47985 274 aa4.68□□□□□ -1.66
SCN1A-218ENST00000640036 CDH12P55289 794 aa4.68□□□□□ -1.66
SCN1A-218ENST00000640036 TRA2BP62995 288 aaKnown RBP4.68□□□□□ -1.66
SCN1A-218ENST00000640036 CRYZQ08257 329 aaKnown RBP4.68□□□□□ -1.66
SCN1A-218ENST00000640036 FAM53BQ14153 422 aa4.68□□□□□ -1.66
SCN1A-218ENST00000640036 ZNF460Q14592 562 aa4.68□□□□□ -1.66
SCN1A-218ENST00000640036 KLHL22Q53GT1 634 aa4.68□□□□□ -1.66
SCN1A-218ENST00000640036 ALKAL1Q6UXT8 129 aa4.68□□□□□ -1.66
SCN1A-218ENST00000640036 GDPD3Q7L5L3 318 aa4.68□□□□□ -1.66
SCN1A-218ENST00000640036 SHFQ7M4L6 423 aa4.68□□□□□ -1.66
SCN1A-218ENST00000640036 MFSD8Q8NHS3 518 aa4.68□□□□□ -1.66
SCN1A-218ENST00000640036 TBC1D15Q8TC07 691 aa4.68□□□□□ -1.66
SCN1A-218ENST00000640036 SLC44A1Q8WWI5 657 aa4.68□□□□□ -1.66
SCN1A-218ENST00000640036 CENPNQ96H22 339 aaPredicted RBP4.68□□□□□ -1.66
SCN1A-218ENST00000640036 MRGPRX2Q96LB1 330 aa4.68□□□□□ -1.66
SCN1A-218ENST00000640036 TMEM43Q9BTV4 400 aa4.68□□□□□ -1.66
SCN1A-218ENST00000640036 KATNBL1Q9H079 304 aa4.68□□□□□ -1.66
SCN1A-218ENST00000640036 ZBTB26Q9HCK0 441 aa4.68□□□□□ -1.66
SCN1A-218ENST00000640036 COPS3Q9UNS2 423 aa4.68□□□□□ -1.66
SCN1A-218ENST00000640036 ZBTB42B2RXF5 422 aa4.67□□□□□ -1.66
SCN1A-218ENST00000640036 CNIH1O95406 144 aa4.67□□□□□ -1.66
SCN1A-218ENST00000640036 NSA2O95478 260 aaKnown RBP4.67□□□□□ -1.66
SCN1A-218ENST00000640036 DIRAS3O95661 229 aa4.67□□□□□ -1.66
SCN1A-218ENST00000640036 PLATP00750 562 aa4.67□□□□□ -1.66
SCN1A-218ENST00000640036 KLKB1P03952 638 aa4.67□□□□□ -1.66
SCN1A-218ENST00000640036 PNLIPP16233 465 aa4.67□□□□□ -1.66
SCN1A-218ENST00000640036 FOLH1Q04609 750 aa4.67□□□□□ -1.66
SCN1A-218ENST00000640036 DPTQ07507 201 aa4.67□□□□□ -1.66
SCN1A-218ENST00000640036 LY6DQ14210 128 aa4.67□□□□□ -1.66
SCN1A-218ENST00000640036 ARL6IP1Q15041 203 aa4.67□□□□□ -1.66
SCN1A-218ENST00000640036 RSU1Q15404 277 aa4.67□□□□□ -1.66
SCN1A-218ENST00000640036 ACER2Q5QJU3 275 aa4.67□□□□□ -1.66
SCN1A-218ENST00000640036 PXKQ7Z7A4 578 aa4.67□□□□□ -1.66
SCN1A-218ENST00000640036 CD163Q86VB7 1156 aa4.67□□□□□ -1.66
SCN1A-218ENST00000640036 HIPK1Q86Z02 1210 aa4.67□□□□□ -1.66
SCN1A-218ENST00000640036 TMEM105Q8N8V8 129 aa4.67□□□□□ -1.66
SCN1A-218ENST00000640036 C17orf50Q8WW18 174 aa4.67□□□□□ -1.66
SCN1A-218ENST00000640036 PATE1Q8WXA2 126 aa4.67□□□□□ -1.66
SCN1A-218ENST00000640036 CPPED1Q9BRF8 314 aaPredicted RBP4.67□□□□□ -1.66
SCN1A-218ENST00000640036 EVA1AQ9H8M9 152 aa4.67□□□□□ -1.66
SCN1A-218ENST00000640036 PRMT8Q9NR22 394 aaPredicted RBP4.67□□□□□ -1.66
SCN1A-218ENST00000640036 TCFL5Q9UL49 500 aa4.67□□□□□ -1.66
SCN1A-218ENST00000640036 PLCE1Q9P212 2302 aa4.67□□□□□ -1.66
SCN1A-218ENST00000640036 WNT7AO00755 349 aa4.67□□□□□ -1.66
SCN1A-218ENST00000640036 ZNF264O43296 627 aa4.67□□□□□ -1.66
SCN1A-218ENST00000640036 ANGPTL7O43827 346 aa4.67□□□□□ -1.66
SCN1A-218ENST00000640036 UGDHO60701 494 aa4.67□□□□□ -1.66
SCN1A-218ENST00000640036 ATP6V1G1O75348 118 aa4.67□□□□□ -1.66
SCN1A-218ENST00000640036 CHRNB2P17787 502 aa4.67□□□□□ -1.66
SCN1A-218ENST00000640036 ETV6P41212 452 aa4.67□□□□□ -1.66
SCN1A-218ENST00000640036 ADARP55265 1226 aaKnown RBP4.67□□□□□ -1.66
SCN1A-218ENST00000640036 DUSP2Q05923 314 aa4.67□□□□□ -1.66
SCN1A-218ENST00000640036 ARL13AQ5H913 290 aaPredicted RBP4.67□□□□□ -1.66
SCN1A-218ENST00000640036 ATAD3CQ5T2N8 411 aa4.67□□□□□ -1.66
SCN1A-218ENST00000640036 BAIAP2L2Q6UXY1 529 aa4.67□□□□□ -1.66
SCN1A-218ENST00000640036 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.67□□□□□ -1.66
SCN1A-218ENST00000640036 IQCF1Q8N6M8 205 aa4.67□□□□□ -1.66
SCN1A-218ENST00000640036 OR56B2PQ8NGI1 322 aa4.67□□□□□ -1.66
SCN1A-218ENST00000640036 HAVCR2Q8TDQ0 301 aa4.67□□□□□ -1.66
SCN1A-218ENST00000640036 ELP5Q8TE02 316 aa4.67□□□□□ -1.66
SCN1A-218ENST00000640036 ZNF350Q9GZX5 532 aa4.67□□□□□ -1.66
SCN1A-218ENST00000640036 TMEM59LQ9UK28 342 aa4.67□□□□□ -1.66
SCN1A-218ENST00000640036 MGAT4BQ9UQ53 548 aa4.67□□□□□ -1.66
SCN1A-218ENST00000640036 TSTD3H0UI37 97 aa4.67□□□□□ -1.66
SCN1A-218ENST00000640036 SCELO95171 688 aa4.67□□□□□ -1.66
SCN1A-218ENST00000640036 DNAJB1P25685 340 aa4.67□□□□□ -1.66
SCN1A-218ENST00000640036 RAB13P51153 203 aa4.67□□□□□ -1.66
SCN1A-218ENST00000640036 PGAM4Q8N0Y7 254 aa4.67□□□□□ -1.66
SCN1A-218ENST00000640036 ARMC10Q8N2F6 343 aa4.67□□□□□ -1.66
SCN1A-218ENST00000640036 TERB2Q8NHR7 220 aa4.67□□□□□ -1.66
SCN1A-218ENST00000640036 MSI2Q96DH6 328 aaKnown RBP4.67□□□□□ -1.66
SCN1A-218ENST00000640036 MBNL1Q9NR56 388 aaKnown RBP4.67□□□□□ -1.66
SCN1A-218ENST00000640036 OR5V1Q9UGF6 321 aa4.67□□□□□ -1.66
SCN1A-218ENST00000640036 CACNA1AO00555 2505 aa4.67□□□□□ -1.66
SCN1A-218ENST00000640036 LRIT2A6NDA9 550 aa4.67□□□□□ -1.66
SCN1A-218ENST00000640036 SCO1O75880 301 aa4.67□□□□□ -1.66
SCN1A-218ENST00000640036 BCKDHAP12694 445 aa4.67□□□□□ -1.66
SCN1A-218ENST00000640036 GFERP55789 205 aa4.67□□□□□ -1.66
SCN1A-218ENST00000640036 CLEC12AQ5QGZ9 265 aa4.67□□□□□ -1.66
SCN1A-218ENST00000640036 AFMIDQ63HM1 303 aa4.67□□□□□ -1.66
SCN1A-218ENST00000640036 NAIF1Q69YI7 327 aaPredicted RBP4.67□□□□□ -1.66
SCN1A-218ENST00000640036 GLYATQ6IB77 296 aa4.67□□□□□ -1.66
SCN1A-218ENST00000640036 OR4F3Q6IEY1 312 aa4.67□□□□□ -1.66
SCN1A-218ENST00000640036 SLC27A4Q6P1M0 643 aa4.67□□□□□ -1.66
SCN1A-218ENST00000640036 CMIPQ8IY22 773 aa4.67□□□□□ -1.66
SCN1A-218ENST00000640036 PIANPQ8IYJ0 282 aa4.67□□□□□ -1.66
SCN1A-218ENST00000640036 C1GALT1C1Q96EU7 318 aa4.67□□□□□ -1.66
SCN1A-218ENST00000640036 ELMOD3Q96FG2 381 aa4.67□□□□□ -1.66
SCN1A-218ENST00000640036 ZNF570Q96NI8 536 aa4.67□□□□□ -1.66
SCN1A-218ENST00000640036 OR4K3Q96R72 315 aa4.67□□□□□ -1.66
SCN1A-218ENST00000640036 MAPKAP1Q9BPZ7 522 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms