RNA–Protein interactions for RNA: ENST00000639501.1

PMS1-222, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 2,506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-222ENST00000639501 SLC25A38Q96DW6 304 aa18.97■□□□□ 0.63
PMS1-222ENST00000639501 SCLYQ96I15 445 aa18.97■□□□□ 0.63
PMS1-222ENST00000639501 FN3KQ9H479 309 aa18.97■□□□□ 0.63
PMS1-222ENST00000639501 NOX3Q9HBY0 568 aa18.97■□□□□ 0.63
PMS1-222ENST00000639501 SIDT1Q9NXL6 827 aaKnown RBP18.97■□□□□ 0.63
PMS1-222ENST00000639501 TRAV1-2A0A0B4J238 106 aa18.96■□□□□ 0.63
PMS1-222ENST00000639501 SIX6O95475 246 aa18.96■□□□□ 0.63
PMS1-222ENST00000639501 SOD2P04179 222 aa18.96■□□□□ 0.63
PMS1-222ENST00000639501 ATP1B1P05026 303 aa18.96■□□□□ 0.63
PMS1-222ENST00000639501 ASGR2P07307 311 aa18.96■□□□□ 0.63
PMS1-222ENST00000639501 MAZP56270 477 aaKnown RBP18.96■□□□□ 0.63
PMS1-222ENST00000639501 C2orf68Q2NKX9 166 aa18.96■□□□□ 0.63
PMS1-222ENST00000639501 HES5Q5TA89 166 aa18.96■□□□□ 0.63
PMS1-222ENST00000639501 SHEQ5VZ18 495 aa18.96■□□□□ 0.63
PMS1-222ENST00000639501 FAM199XQ6PEV8 388 aaPredicted RBP18.96■□□□□ 0.63
PMS1-222ENST00000639501 TEX19Q8NA77 164 aa18.96■□□□□ 0.63
PMS1-222ENST00000639501 SFXN5Q8TD22 340 aa18.96■□□□□ 0.63
PMS1-222ENST00000639501 SCARB1Q8WTV0 552 aa18.96■□□□□ 0.63
PMS1-222ENST00000639501 GFI1Q99684 422 aa18.96■□□□□ 0.63
PMS1-222ENST00000639501 SLC46A2Q9BY10 475 aa18.96■□□□□ 0.63
PMS1-222ENST00000639501 TTYH1Q9H313 450 aaPredicted RBP18.96■□□□□ 0.63
PMS1-222ENST00000639501 DPEP2Q9H4A9 486 aa18.96■□□□□ 0.63
PMS1-222ENST00000639501 ZCCHC4Q9H5U6 513 aa18.96■□□□□ 0.63
PMS1-222ENST00000639501 EXOSC3Q9NQT5 275 aaKnown RBP18.96■□□□□ 0.63
PMS1-222ENST00000639501 CHURC1-FNTBB4DL54 471 aa18.96■□□□□ 0.63
PMS1-222ENST00000639501 OR5F1O95221 314 aa18.96■□□□□ 0.63
PMS1-222ENST00000639501 PRKAR1BP31321 381 aa18.96■□□□□ 0.63
PMS1-222ENST00000639501 RPS11P62280 158 aaKnown RBP eCLIP18.96■□□□□ 0.63
PMS1-222ENST00000639501 UBE2NLQ5JXB2 153 aa18.96■□□□□ 0.63
PMS1-222ENST00000639501 DCUN1D3Q8IWE4 304 aa18.96■□□□□ 0.63
PMS1-222ENST00000639501 TCEAL8Q8IYN2 117 aa18.96■□□□□ 0.63
PMS1-222ENST00000639501 MEIOBQ8N635 442 aa18.96■□□□□ 0.63
PMS1-222ENST00000639501 NUP43Q8NFH3 380 aa18.96■□□□□ 0.63
PMS1-222ENST00000639501 OR13C2Q8NGS9 318 aa18.96■□□□□ 0.63
PMS1-222ENST00000639501 OR2L2Q8NH16 312 aa18.96■□□□□ 0.63
PMS1-222ENST00000639501 THEM6Q8WUY1 208 aa18.96■□□□□ 0.63
PMS1-222ENST00000639501 TFGQ92734 400 aaPredicted RBP18.96■□□□□ 0.63
PMS1-222ENST00000639501 MENTQ9BUN1 341 aa18.96■□□□□ 0.63
PMS1-222ENST00000639501 IFT27Q9BW83 186 aa18.96■□□□□ 0.63
PMS1-222ENST00000639501 SLC23A2Q9UGH3 650 aa18.96■□□□□ 0.63
PMS1-222ENST00000639501 SYNDIG1LA6NDD5 238 aa18.95■□□□□ 0.62
PMS1-222ENST00000639501 PLATP00750 562 aa18.95■□□□□ 0.62
PMS1-222ENST00000639501 ERGP11308 486 aa18.95■□□□□ 0.62
PMS1-222ENST00000639501 C4BPBP20851 252 aa18.95■□□□□ 0.62
PMS1-222ENST00000639501 S100A11P31949 105 aa18.95■□□□□ 0.62
PMS1-222ENST00000639501 GPR1P46091 355 aa18.95■□□□□ 0.62
PMS1-222ENST00000639501 ANXA11P50995 505 aaKnown RBP18.95■□□□□ 0.62
PMS1-222ENST00000639501 TAS2R43P59537 309 aa18.95■□□□□ 0.62
PMS1-222ENST00000639501 FOXK2Q01167 660 aa18.95■□□□□ 0.62
PMS1-222ENST00000639501 RAB33AQ14088 237 aa18.95■□□□□ 0.62
PMS1-222ENST00000639501 CRMP1Q14194 572 aa18.95■□□□□ 0.62
PMS1-222ENST00000639501 PRAMEF8Q5VWM4 474 aa18.95■□□□□ 0.62
PMS1-222ENST00000639501 PRAMEF7Q5VXH5 474 aa18.95■□□□□ 0.62
PMS1-222ENST00000639501 TMUB2Q71RG4 321 aa18.95■□□□□ 0.62
PMS1-222ENST00000639501 LNX2Q8N448 690 aa18.95■□□□□ 0.62
PMS1-222ENST00000639501 OR56A1Q8NGH5 318 aa18.95■□□□□ 0.62
PMS1-222ENST00000639501 OR52L1Q8NGH7 329 aa18.95■□□□□ 0.62
PMS1-222ENST00000639501 PAWRQ96IZ0 340 aaKnown RBP18.95■□□□□ 0.62
PMS1-222ENST00000639501 PLEKHA1Q9HB21 404 aa18.95■□□□□ 0.62
PMS1-222ENST00000639501 TM7SF3Q9NS93 570 aa18.95■□□□□ 0.62
PMS1-222ENST00000639501 KLHL28Q9NXS3 571 aa18.95■□□□□ 0.62
PMS1-222ENST00000639501 ZNF223Q9UK11 482 aaPredicted RBP18.95■□□□□ 0.62
PMS1-222ENST00000639501 ZNF443Q9Y2A4 671 aaPredicted RBP18.95■□□□□ 0.62
PMS1-222ENST00000639501 IGKV1-8A0A0C4DH67 115 aa18.95■□□□□ 0.62
PMS1-222ENST00000639501 LRIT2A6NDA9 550 aa18.95■□□□□ 0.62
PMS1-222ENST00000639501 SLC22A31A6NKX4 558 aa18.95■□□□□ 0.62
PMS1-222ENST00000639501 RP2O75695 350 aa18.95■□□□□ 0.62
PMS1-222ENST00000639501 OR2A4O95047 310 aa18.95■□□□□ 0.62
PMS1-222ENST00000639501 PCDH8O95206 1070 aa18.95■□□□□ 0.62
PMS1-222ENST00000639501 AIFM1O95831 613 aa18.95■□□□□ 0.62
PMS1-222ENST00000639501 GABRA1P14867 456 aa18.95■□□□□ 0.62
PMS1-222ENST00000639501 IFNGR1P15260 489 aa18.95■□□□□ 0.62
PMS1-222ENST00000639501 DCTDP32321 178 aa18.95■□□□□ 0.62
PMS1-222ENST00000639501 GDI2P50395 445 aaKnown RBP18.95■□□□□ 0.62
PMS1-222ENST00000639501 CLDN12P56749 244 aa18.95■□□□□ 0.62
PMS1-222ENST00000639501 RPS15P62841 145 aaKnown RBP18.95■□□□□ 0.62
PMS1-222ENST00000639501 ZNF836Q6ZNA1 936 aa18.95■□□□□ 0.62
PMS1-222ENST00000639501 FRRS1Q6ZNA5 592 aa18.95■□□□□ 0.62
PMS1-222ENST00000639501 OR2A7Q96R45 310 aa18.95■□□□□ 0.62
PMS1-222ENST00000639501 SLC25A18Q9H1K4 315 aa18.95■□□□□ 0.62
PMS1-222ENST00000639501 CMC2Q9NRP2 79 aa18.95■□□□□ 0.62
PMS1-222ENST00000639501 INPP5EQ9NRR6 644 aa18.95■□□□□ 0.62
PMS1-222ENST00000639501 ADAM29Q9UKF5 820 aa18.95■□□□□ 0.62
PMS1-222ENST00000639501 DNASE2O00115 360 aaPredicted RBP18.94■□□□□ 0.62
PMS1-222ENST00000639501 AIPO00170 330 aa18.94■□□□□ 0.62
PMS1-222ENST00000639501 TYRP14679 529 aa18.94■□□□□ 0.62
PMS1-222ENST00000639501 CPN1P15169 458 aa18.94■□□□□ 0.62
PMS1-222ENST00000639501 SYN1P17600 705 aa18.94■□□□□ 0.62
PMS1-222ENST00000639501 SLC2A5P22732 501 aa18.94■□□□□ 0.62
PMS1-222ENST00000639501 ZNF136P52737 540 aa18.94■□□□□ 0.62
PMS1-222ENST00000639501 RAP2BP61225 183 aa18.94■□□□□ 0.62
PMS1-222ENST00000639501 SEC61A1P61619 476 aaKnown RBP18.94■□□□□ 0.62
PMS1-222ENST00000639501 CSNK1G2P78368 415 aa18.94■□□□□ 0.62
PMS1-222ENST00000639501 CSRP2Q16527 193 aa18.94■□□□□ 0.62
PMS1-222ENST00000639501 ELFN2Q5R3F8 820 aa18.94■□□□□ 0.62
PMS1-222ENST00000639501 ZNF626Q68DY1 528 aa18.94■□□□□ 0.62
PMS1-222ENST00000639501 LINC01555Q8NAE3 123 aa18.94■□□□□ 0.62
PMS1-222ENST00000639501 OR5M1Q8NGP8 315 aa18.94■□□□□ 0.62
PMS1-222ENST00000639501 MRPS24Q96EL2 167 aaKnown RBP18.94■□□□□ 0.62
PMS1-222ENST00000639501 SLC35A4Q96G79 324 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms