RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 MAOAP21397 527 aa10.65□□□□□ -0.7
CLN6-217ENST00000636964 KIR2DL3P43628 341 aa10.65□□□□□ -0.7
CLN6-217ENST00000636964 MGAT2Q10469 447 aa10.65□□□□□ -0.7
CLN6-217ENST00000636964 STX4Q12846 297 aa10.65□□□□□ -0.7
CLN6-217ENST00000636964 PPA1Q15181 289 aa10.65□□□□□ -0.7
CLN6-217ENST00000636964 GARNL3Q5VVW2 1013 aa10.65□□□□□ -0.7
CLN6-217ENST00000636964 ZNF770Q6IQ21 691 aaPredicted RBP10.65□□□□□ -0.7
CLN6-217ENST00000636964 CARFQ8N187 725 aa10.65□□□□□ -0.7
CLN6-217ENST00000636964 SETD6Q8TBK2 473 aa10.65□□□□□ -0.7
CLN6-217ENST00000636964 ART5Q96L15 291 aa10.65□□□□□ -0.7
CLN6-217ENST00000636964 PLCL2Q9UPR0 1127 aa10.65□□□□□ -0.7
CLN6-217ENST00000636964 LIPT1Q9Y234 373 aa10.65□□□□□ -0.7
CLN6-217ENST00000636964 TLCD2A6NGC4 264 aa10.65□□□□□ -0.7
CLN6-217ENST00000636964 GPX5O75715 221 aa10.65□□□□□ -0.7
CLN6-217ENST00000636964 CDK1P06493 297 aa10.65□□□□□ -0.7
CLN6-217ENST00000636964 RNF224P0DH78 156 aa10.65□□□□□ -0.7
CLN6-217ENST00000636964 GABRA3P34903 492 aa10.65□□□□□ -0.7
CLN6-217ENST00000636964 GABRA4P48169 554 aa10.65□□□□□ -0.7
CLN6-217ENST00000636964 PTGES3Q15185 160 aaKnown RBP10.65□□□□□ -0.7
CLN6-217ENST00000636964 BTBD16Q32M84 506 aa10.65□□□□□ -0.7
CLN6-217ENST00000636964 ARMCX4Q5H9R4 360 aa10.65□□□□□ -0.7
CLN6-217ENST00000636964 PODNL1Q6PEZ8 512 aa10.65□□□□□ -0.7
CLN6-217ENST00000636964 C19orf48Q6RUI8 117 aa10.65□□□□□ -0.7
CLN6-217ENST00000636964 TCTE3Q8IZS6 198 aa10.65□□□□□ -0.7
CLN6-217ENST00000636964 LNX2Q8N448 690 aa10.65□□□□□ -0.7
CLN6-217ENST00000636964 KBTBD8Q8NFY9 601 aa10.65□□□□□ -0.7
CLN6-217ENST00000636964 OR52R1Q8NGF1 315 aa10.65□□□□□ -0.7
CLN6-217ENST00000636964 MAFAQ8NHW3 353 aaPredicted RBP10.65□□□□□ -0.7
CLN6-217ENST00000636964 ZDHHC12Q96GR4 267 aa10.65□□□□□ -0.7
CLN6-217ENST00000636964 SDF2Q99470 211 aa10.65□□□□□ -0.7
CLN6-217ENST00000636964 SAV1Q9H4B6 383 aaPredicted RBP10.65□□□□□ -0.7
CLN6-217ENST00000636964 SMURF1Q9HCE7 757 aa10.65□□□□□ -0.7
CLN6-217ENST00000636964 DIABLOQ9NR28 239 aa10.65□□□□□ -0.7
CLN6-217ENST00000636964 NTMQ9P121 344 aa10.65□□□□□ -0.7
CLN6-217ENST00000636964 NDOR1Q9UHB4 597 aa10.65□□□□□ -0.7
CLN6-217ENST00000636964 IGHV1OR21-1A0A087WYE8 117 aa10.64□□□□□ -0.71
CLN6-217ENST00000636964 GXYLT2A0PJZ3 443 aa10.64□□□□□ -0.71
CLN6-217ENST00000636964 F8W036 122 aa10.64□□□□□ -0.71
CLN6-217ENST00000636964 CCNYL3P0C7X3 344 aa10.64□□□□□ -0.71
CLN6-217ENST00000636964 GIMD1P0DJR0 217 aa10.64□□□□□ -0.71
CLN6-217ENST00000636964 RNH1P13489 461 aaKnown RBP10.64□□□□□ -0.71
CLN6-217ENST00000636964 OR1D4P47884 311 aa10.64□□□□□ -0.71
CLN6-217ENST00000636964 BNC1Q01954 994 aa10.64□□□□□ -0.71
CLN6-217ENST00000636964 MADCAM1Q13477 382 aa10.64□□□□□ -0.71
CLN6-217ENST00000636964 SSX1Q16384 188 aa10.64□□□□□ -0.71
CLN6-217ENST00000636964 NDUFA9Q16795 377 aa10.64□□□□□ -0.71
CLN6-217ENST00000636964 TYW3Q6IPR3 259 aaKnown RBP10.64□□□□□ -0.71
CLN6-217ENST00000636964 HEPHL1Q6MZM0 1159 aa10.64□□□□□ -0.71
CLN6-217ENST00000636964 OR6S1Q8NH40 331 aa10.64□□□□□ -0.71
CLN6-217ENST00000636964 PINK1Q9BXM7 581 aa10.64□□□□□ -0.71
CLN6-217ENST00000636964 ASCC3Q8N3C0 2202 aaKnown RBP10.64□□□□□ -0.71
CLN6-217ENST00000636964 MAP1BP46821 2468 aaKnown RBP10.64□□□□□ -0.71
CLN6-217ENST00000636964 CIB4A0PJX0 185 aa10.64□□□□□ -0.71
CLN6-217ENST00000636964 C19orf67A6NJJ6 358 aa10.64□□□□□ -0.71
CLN6-217ENST00000636964 PLA2G10O15496 165 aa10.64□□□□□ -0.71
CLN6-217ENST00000636964 PRKNO60260 465 aaPredicted RBP10.64□□□□□ -0.71
CLN6-217ENST00000636964 SSTR4P31391 388 aa10.64□□□□□ -0.71
CLN6-217ENST00000636964 TRHRP34981 398 aaPredicted RBP10.64□□□□□ -0.71
CLN6-217ENST00000636964 GGT2P36268 569 aa10.64□□□□□ -0.71
CLN6-217ENST00000636964 TALDO1P37837 337 aa10.64□□□□□ -0.71
CLN6-217ENST00000636964 RPS19P39019 145 aaKnown RBP10.64□□□□□ -0.71
CLN6-217ENST00000636964 ARL4DP49703 201 aa10.64□□□□□ -0.71
CLN6-217ENST00000636964 MAPK14Q16539 360 aa10.64□□□□□ -0.71
CLN6-217ENST00000636964 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.64□□□□□ -0.71
CLN6-217ENST00000636964 TMEM65Q6PI78 240 aa10.64□□□□□ -0.71
CLN6-217ENST00000636964 TTLL10Q6ZVT0 673 aa10.64□□□□□ -0.71
CLN6-217ENST00000636964 COX18Q8N8Q8 333 aa10.64□□□□□ -0.71
CLN6-217ENST00000636964 UBASH3BQ8TF42 649 aa10.64□□□□□ -0.71
CLN6-217ENST00000636964 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.64□□□□□ -0.71
CLN6-217ENST00000636964 DHCR7Q9UBM7 475 aaKnown RBP10.64□□□□□ -0.71
CLN6-217ENST00000636964 WDFY3Q8IZQ1 3526 aa10.64□□□□□ -0.71
CLN6-217ENST00000636964 TMEM150CB9EJG8 249 aa10.64□□□□□ -0.71
CLN6-217ENST00000636964 H3BN98 237 aa10.64□□□□□ -0.71
CLN6-217ENST00000636964 PEX12O00623 359 aa10.64□□□□□ -0.71
CLN6-217ENST00000636964 PLOD3O60568 738 aa10.64□□□□□ -0.71
CLN6-217ENST00000636964 MYL9P24844 172 aa10.64□□□□□ -0.71
CLN6-217ENST00000636964 PGDP52209 483 aa10.64□□□□□ -0.71
CLN6-217ENST00000636964 TAS2R41P59536 307 aa10.64□□□□□ -0.71
CLN6-217ENST00000636964 SHBQ15464 509 aa10.64□□□□□ -0.71
CLN6-217ENST00000636964 NNATQ16517 81 aa10.64□□□□□ -0.71
CLN6-217ENST00000636964 LYSMD4Q5XG99 296 aa10.64□□□□□ -0.71
CLN6-217ENST00000636964 P3H2Q8IVL5 708 aa10.64□□□□□ -0.71
CLN6-217ENST00000636964 VWA5B2Q8N398 1253 aa10.64□□□□□ -0.71
CLN6-217ENST00000636964 TMEM80Q96HE8 168 aa10.64□□□□□ -0.71
CLN6-217ENST00000636964 PIGUQ9H490 435 aa10.64□□□□□ -0.71
CLN6-217ENST00000636964 C11orf16Q9NQ32 467 aa10.64□□□□□ -0.71
CLN6-217ENST00000636964 PRTFDC1Q9NRG1 225 aa10.64□□□□□ -0.71
CLN6-217ENST00000636964 MAN2C1Q9NTJ4 1040 aa10.64□□□□□ -0.71
CLN6-217ENST00000636964 CALML5Q9NZT1 146 aa10.64□□□□□ -0.71
CLN6-217ENST00000636964 CACNA1EQ15878 2313 aa10.64□□□□□ -0.71
CLN6-217ENST00000636964 DSPPQ9NZW4 1301 aa10.63□□□□□ -0.71
CLN6-217ENST00000636964 PNMA8CA0A1B0GUJ8 204 aa10.63□□□□□ -0.71
CLN6-217ENST00000636964 CBX7O95931 251 aa10.63□□□□□ -0.71
CLN6-217ENST00000636964 SLC35E2P0CK97 266 aa10.63□□□□□ -0.71
CLN6-217ENST00000636964 TNNI3P19429 210 aa10.63□□□□□ -0.71
CLN6-217ENST00000636964 FOXK2Q01167 660 aa10.63□□□□□ -0.71
CLN6-217ENST00000636964 ZNF155Q12901 538 aaPredicted RBP10.63□□□□□ -0.71
CLN6-217ENST00000636964 DUSP8Q13202 625 aa10.63□□□□□ -0.71
CLN6-217ENST00000636964 ZNF267Q14586 743 aaPredicted RBP10.63□□□□□ -0.71
CLN6-217ENST00000636964 ARHGAP11BQ3KRB8 267 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms