RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 CENPVL1A0A0U1RR11 272 aa15.93■□□□□ 0.14
PNKP-225ENST00000636214 TMEM120BA0PK00 339 aa15.93■□□□□ 0.14
PNKP-225ENST00000636214 GOLGA8OA6NCC3 632 aa15.93■□□□□ 0.14
PNKP-225ENST00000636214 CCDC154A6NI56 674 aa15.93■□□□□ 0.14
PNKP-225ENST00000636214 GOLGA8NF8WBI6 632 aa15.93■□□□□ 0.14
PNKP-225ENST00000636214 SDHDO14521 159 aa15.93■□□□□ 0.14
PNKP-225ENST00000636214 CYTIPO60759 359 aa15.93■□□□□ 0.14
PNKP-225ENST00000636214 H6PDO95479 791 aa15.93■□□□□ 0.14
PNKP-225ENST00000636214 PGRP06401 933 aa15.93■□□□□ 0.14
PNKP-225ENST00000636214 FESP07332 822 aa15.93■□□□□ 0.14
PNKP-225ENST00000636214 FKBP2P26885 142 aaKnown RBP15.93■□□□□ 0.14
PNKP-225ENST00000636214 EPHA3P29320 983 aa15.93■□□□□ 0.14
PNKP-225ENST00000636214 PGM1P36871 562 aa15.93■□□□□ 0.14
PNKP-225ENST00000636214 DIO1P49895 249 aa15.93■□□□□ 0.14
PNKP-225ENST00000636214 UFM1P61960 85 aa15.93■□□□□ 0.14
PNKP-225ENST00000636214 PHC1P78364 1004 aa15.93■□□□□ 0.14
PNKP-225ENST00000636214 KCNJ10P78508 379 aa15.93■□□□□ 0.14
PNKP-225ENST00000636214 ITGADQ13349 1161 aa15.93■□□□□ 0.14
PNKP-225ENST00000636214 PRSS57Q6UWY2 283 aa15.93■□□□□ 0.14
PNKP-225ENST00000636214 TMPPEQ6ZT21 453 aa15.93■□□□□ 0.14
PNKP-225ENST00000636214 YTHDF3Q7Z739 585 aaKnown RBP15.93■□□□□ 0.14
PNKP-225ENST00000636214 GALNT5Q7Z7M9 940 aa15.93■□□□□ 0.14
PNKP-225ENST00000636214 GABRG1Q8N1C3 465 aa15.93■□□□□ 0.14
PNKP-225ENST00000636214 GLB1L3Q8NCI6 653 aaPredicted RBP15.93■□□□□ 0.14
PNKP-225ENST00000636214 Q96MF0 132 aa15.93■□□□□ 0.14
PNKP-225ENST00000636214 PSD2Q9BQI7 771 aa15.93■□□□□ 0.14
PNKP-225ENST00000636214 BDH2Q9BUT1 245 aa15.93■□□□□ 0.14
PNKP-225ENST00000636214 POTEKPQ9BYX7 375 aa15.93■□□□□ 0.14
PNKP-225ENST00000636214 ESRP2Q9H6T0 727 aaKnown RBP15.93■□□□□ 0.14
PNKP-225ENST00000636214 BCO1Q9HAY6 547 aa15.93■□□□□ 0.14
PNKP-225ENST00000636214 CACYBPQ9HB71 228 aaKnown RBP15.93■□□□□ 0.14
PNKP-225ENST00000636214 CHRNA9Q9UGM1 479 aa15.93■□□□□ 0.14
PNKP-225ENST00000636214 ZNF724A8MTY0 619 aa15.92■□□□□ 0.14
PNKP-225ENST00000636214 HS3ST1O14792 307 aa15.92■□□□□ 0.14
PNKP-225ENST00000636214 CLOCKO15516 846 aa15.92■□□□□ 0.14
PNKP-225ENST00000636214 DNAJA2O60884 412 aa15.92■□□□□ 0.14
PNKP-225ENST00000636214 TMCC2O75069 709 aa15.92■□□□□ 0.14
PNKP-225ENST00000636214 GCM2O75603 506 aaPredicted RBP15.92■□□□□ 0.14
PNKP-225ENST00000636214 KRT75O95678 551 aa15.92■□□□□ 0.14
PNKP-225ENST00000636214 CD3EP07766 207 aa15.92■□□□□ 0.14
PNKP-225ENST00000636214 ALDOCP09972 364 aaKnown RBP15.92■□□□□ 0.14
PNKP-225ENST00000636214 NID1P14543 1247 aa15.92■□□□□ 0.14
PNKP-225ENST00000636214 LOXP28300 417 aaPredicted RBP15.92■□□□□ 0.14
PNKP-225ENST00000636214 MAPK14Q16539 360 aa15.92■□□□□ 0.14
PNKP-225ENST00000636214 Q6ZT83 130 aa15.92■□□□□ 0.14
PNKP-225ENST00000636214 BHLHA15Q7RTS1 189 aaPredicted RBP15.92■□□□□ 0.14
PNKP-225ENST00000636214 GRINAQ7Z429 371 aa15.92■□□□□ 0.14
PNKP-225ENST00000636214 CMIPQ8IY22 773 aa15.92■□□□□ 0.14
PNKP-225ENST00000636214 FAM71CQ8NEG0 241 aa15.92■□□□□ 0.14
PNKP-225ENST00000636214 RAB3IL1Q8TBN0 382 aa15.92■□□□□ 0.14
PNKP-225ENST00000636214 POM121Q96HA1 1249 aa15.92■□□□□ 0.14
PNKP-225ENST00000636214 TRNT1Q96Q11 434 aaKnown RBP15.92■□□□□ 0.14
PNKP-225ENST00000636214 SAP130Q9H0E3 1048 aa15.92■□□□□ 0.14
PNKP-225ENST00000636214 EXOSC3Q9NQT5 275 aaKnown RBP15.92■□□□□ 0.14
PNKP-225ENST00000636214 RNF115Q9Y4L5 304 aa15.92■□□□□ 0.14
PNKP-225ENST00000636214 C9JVG2 144 aa15.91■□□□□ 0.14
PNKP-225ENST00000636214 HMGN4O00479 90 aa15.91■□□□□ 0.14
PNKP-225ENST00000636214 RFXANKO14593 260 aa15.91■□□□□ 0.14
PNKP-225ENST00000636214 SMAD9O15198 467 aaKnown RBP15.91■□□□□ 0.14
PNKP-225ENST00000636214 ANP32DO95626 131 aa15.91■□□□□ 0.14
PNKP-225ENST00000636214 NR2F1P10589 423 aa15.91■□□□□ 0.14
PNKP-225ENST00000636214 IDO1P14902 403 aa15.91■□□□□ 0.14
PNKP-225ENST00000636214 IL7RP16871 459 aa15.91■□□□□ 0.14
PNKP-225ENST00000636214 HTR3AP46098 478 aa15.91■□□□□ 0.14
PNKP-225ENST00000636214 OR3A2P47893 321 aa15.91■□□□□ 0.14
PNKP-225ENST00000636214 CHRNEQ04844 493 aa15.91■□□□□ 0.14
PNKP-225ENST00000636214 FUT5Q11128 374 aa15.91■□□□□ 0.14
PNKP-225ENST00000636214 TSC22D1Q15714 1073 aa15.91■□□□□ 0.14
PNKP-225ENST00000636214 TAB1Q15750 504 aa15.91■□□□□ 0.14
PNKP-225ENST00000636214 STK11Q15831 433 aa15.91■□□□□ 0.14
PNKP-225ENST00000636214 CLEC9AQ6UXN8 241 aa15.91■□□□□ 0.14
PNKP-225ENST00000636214 HMGN2P46Q86SG4 172 aa15.91■□□□□ 0.14
PNKP-225ENST00000636214 KRTAP1-3Q8IUG1 177 aa15.91■□□□□ 0.14
PNKP-225ENST00000636214 UBE2J2Q8N2K1 259 aa15.91■□□□□ 0.14
PNKP-225ENST00000636214 ZNF611Q8N823 705 aa15.91■□□□□ 0.14
PNKP-225ENST00000636214 PIGXQ8TBF5 258 aa15.91■□□□□ 0.14
PNKP-225ENST00000636214 WDR60Q8WVS4 1066 aa15.91■□□□□ 0.14
PNKP-225ENST00000636214 AKAP1Q92667 903 aaKnown RBP eCLIP15.91■□□□□ 0.14
PNKP-225ENST00000636214 ZNF775Q96BV0 537 aaPredicted RBP15.91■□□□□ 0.14
PNKP-225ENST00000636214 ZNF524Q96C55 264 aa15.91■□□□□ 0.14
PNKP-225ENST00000636214 MUCL1Q96DR8 90 aa15.91■□□□□ 0.14
PNKP-225ENST00000636214 GSX2Q9BZM3 304 aa15.91■□□□□ 0.14
PNKP-225ENST00000636214 WDR55Q9H6Y2 383 aaPredicted RBP15.91■□□□□ 0.14
PNKP-225ENST00000636214 CTPS2Q9NRF8 586 aa15.91■□□□□ 0.14
PNKP-225ENST00000636214 HDGFL3Q9Y3E1 203 aa15.91■□□□□ 0.14
PNKP-225ENST00000636214 CADP27708 2225 aa15.91■□□□□ 0.14
PNKP-225ENST00000636214 TLN2Q9Y4G6 2542 aa15.91■□□□□ 0.14
PNKP-225ENST00000636214 RAI1Q7Z5J4 1906 aaPredicted RBP15.9■□□□□ 0.14
PNKP-225ENST00000636214 TMEM247A6NEH6 219 aa15.9■□□□□ 0.14
PNKP-225ENST00000636214 GPR171O14626 319 aa15.9■□□□□ 0.14
PNKP-225ENST00000636214 IL6P05231 212 aa15.9■□□□□ 0.14
PNKP-225ENST00000636214 PTH2RP49190 550 aa15.9■□□□□ 0.14
PNKP-225ENST00000636214 CLK1P49759 484 aaKnown RBP15.9■□□□□ 0.14
PNKP-225ENST00000636214 MAGOHP61326 146 aaKnown RBP15.9■□□□□ 0.14
PNKP-225ENST00000636214 SYPL1Q16563 259 aa15.9■□□□□ 0.14
PNKP-225ENST00000636214 KRTAP21-3Q3LHN1 58 aa15.9■□□□□ 0.14
PNKP-225ENST00000636214 LRRC74BQ6ZQY2 392 aa15.9■□□□□ 0.14
PNKP-225ENST00000636214 SSX8Q7RTT4 187 aa15.9■□□□□ 0.14
PNKP-225ENST00000636214 MTDHQ86UE4 582 aaKnown RBP15.9■□□□□ 0.14
PNKP-225ENST00000636214 PEX5LQ8IYB4 626 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms