RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 FZD4Q9ULV1 537 aa4.42□□□□□ -1.7
SDCBP-213ENST00000630925 PSG11Q9UQ72 335 aa4.42□□□□□ -1.7
SDCBP-213ENST00000630925 POLR3HQ9Y535 204 aaPredicted RBP4.42□□□□□ -1.7
SDCBP-213ENST00000630925 ALG6Q9Y672 507 aa4.42□□□□□ -1.7
SDCBP-213ENST00000630925 RAB3GAP2Q9H2M9 1393 aa4.42□□□□□ -1.7
SDCBP-213ENST00000630925 A0A1B0GTI1 187 aa4.41□□□□□ -1.7
SDCBP-213ENST00000630925 TCRBV7S3A2A0A539 114 aa4.41□□□□□ -1.7
SDCBP-213ENST00000630925 NKX6-3A6NJ46 265 aa4.41□□□□□ -1.7
SDCBP-213ENST00000630925 F8VVB4 439 aa4.41□□□□□ -1.7
SDCBP-213ENST00000630925 F8VWA3 439 aa4.41□□□□□ -1.7
SDCBP-213ENST00000630925 CHEK1O14757 476 aa4.41□□□□□ -1.7
SDCBP-213ENST00000630925 LDOC1O95751 146 aaPredicted RBP4.41□□□□□ -1.7
SDCBP-213ENST00000630925 EGFP01133 1207 aa4.41□□□□□ -1.7
SDCBP-213ENST00000630925 NBEAP1P0C6P0 100 aa4.41□□□□□ -1.7
SDCBP-213ENST00000630925 PET100P0DJ07 73 aa4.41□□□□□ -1.7
SDCBP-213ENST00000630925 ZNF43P17038 809 aa4.41□□□□□ -1.7
SDCBP-213ENST00000630925 SRD5A1P18405 259 aa4.41□□□□□ -1.7
SDCBP-213ENST00000630925 FBLN1P23142 703 aa4.41□□□□□ -1.7
SDCBP-213ENST00000630925 HTR2CP28335 458 aa4.41□□□□□ -1.7
SDCBP-213ENST00000630925 KCNK10P57789 538 aa4.41□□□□□ -1.7
SDCBP-213ENST00000630925 MRPS22P82650 360 aaKnown RBP4.41□□□□□ -1.7
SDCBP-213ENST00000630925 VLDLRP98155 873 aa4.41□□□□□ -1.7
SDCBP-213ENST00000630925 MESP2Q0VG99 397 aa4.41□□□□□ -1.7
SDCBP-213ENST00000630925 ZP4Q12836 540 aa4.41□□□□□ -1.7
SDCBP-213ENST00000630925 GAB1Q13480 694 aa4.41□□□□□ -1.7
SDCBP-213ENST00000630925 TMEM132DQ14C87 1099 aa4.41□□□□□ -1.7
SDCBP-213ENST00000630925 LTB4RQ15722 352 aa4.41□□□□□ -1.7
SDCBP-213ENST00000630925 HLFQ16534 295 aa4.41□□□□□ -1.7
SDCBP-213ENST00000630925 CDKN3Q16667 212 aa4.41□□□□□ -1.7
SDCBP-213ENST00000630925 CR1LQ2VPA4 569 aa4.41□□□□□ -1.7
SDCBP-213ENST00000630925 ZNF385BQ569K4 471 aa4.41□□□□□ -1.7
SDCBP-213ENST00000630925 HACD4Q5VWC8 232 aa4.41□□□□□ -1.7
SDCBP-213ENST00000630925 CERS6Q6ZMG9 384 aa4.41□□□□□ -1.7
SDCBP-213ENST00000630925 CCNI2Q6ZMN8 369 aaPredicted RBP4.41□□□□□ -1.7
SDCBP-213ENST00000630925 TPRG1Q6ZUI0 275 aa4.41□□□□□ -1.7
SDCBP-213ENST00000630925 CCDC190Q86UF4 302 aa4.41□□□□□ -1.7
SDCBP-213ENST00000630925 AMIGO1Q86WK6 493 aa4.41□□□□□ -1.7
SDCBP-213ENST00000630925 APLFQ8IW19 511 aaPredicted RBP4.41□□□□□ -1.7
SDCBP-213ENST00000630925 RIBC1Q8N443 379 aaPredicted RBP4.41□□□□□ -1.7
SDCBP-213ENST00000630925 TMEM151AQ8N4L1 468 aa4.41□□□□□ -1.7
SDCBP-213ENST00000630925 BMPERQ8N8U9 685 aa4.41□□□□□ -1.7
SDCBP-213ENST00000630925 INO80EQ8NBZ0 244 aaPredicted RBP4.41□□□□□ -1.7
SDCBP-213ENST00000630925 OR10A7Q8NGE5 316 aa4.41□□□□□ -1.7
SDCBP-213ENST00000630925 OR4Q3Q8NH05 313 aa4.41□□□□□ -1.7
SDCBP-213ENST00000630925 TMEM163Q8TC26 289 aa4.41□□□□□ -1.7
SDCBP-213ENST00000630925 MRGPRDQ8TDS7 321 aa4.41□□□□□ -1.7
SDCBP-213ENST00000630925 ATG4AQ8WYN0 398 aa4.41□□□□□ -1.7
SDCBP-213ENST00000630925 AKAP1Q92667 903 aaKnown RBP eCLIP4.41□□□□□ -1.7
SDCBP-213ENST00000630925 S100PBPQ96BU1 408 aa4.41□□□□□ -1.7
SDCBP-213ENST00000630925 IL12RB2Q99665 862 aa4.41□□□□□ -1.7
SDCBP-213ENST00000630925 DPCDQ9BVM2 203 aaPredicted RBP4.41□□□□□ -1.7
SDCBP-213ENST00000630925 TRABDQ9H4I3 376 aa4.41□□□□□ -1.7
SDCBP-213ENST00000630925 GPN2Q9H9Y4 310 aaPredicted RBP4.41□□□□□ -1.7
SDCBP-213ENST00000630925 FBXO8Q9NRD0 319 aa4.41□□□□□ -1.7
SDCBP-213ENST00000630925 BABAM2Q9NXR7 383 aa4.41□□□□□ -1.7
SDCBP-213ENST00000630925 VNN3Q9NY84 501 aa4.41□□□□□ -1.7
SDCBP-213ENST00000630925 PRPF19Q9UMS4 504 aaKnown RBP4.41□□□□□ -1.7
SDCBP-213ENST00000630925 DIMT1Q9UNQ2 313 aaKnown RBP4.41□□□□□ -1.7
SDCBP-213ENST00000630925 VCANP13611 3396 aa4.41□□□□□ -1.7
SDCBP-213ENST00000630925 KAT6AQ92794 2004 aa4.41□□□□□ -1.7
SDCBP-213ENST00000630925 A0A1B0GUS0 222 aa4.41□□□□□ -1.7
SDCBP-213ENST00000630925 TFECO14948 347 aaPredicted RBP4.41□□□□□ -1.7
SDCBP-213ENST00000630925 SLC31A2O15432 143 aa4.41□□□□□ -1.7
SDCBP-213ENST00000630925 SCO2O43819 266 aa4.41□□□□□ -1.7
SDCBP-213ENST00000630925 MED6O75586 246 aa4.41□□□□□ -1.7
SDCBP-213ENST00000630925 AP2A2O94973 939 aa4.41□□□□□ -1.7
SDCBP-213ENST00000630925 ANP32DO95626 131 aa4.41□□□□□ -1.7
SDCBP-213ENST00000630925 BAG3O95817 575 aa4.41□□□□□ -1.7
SDCBP-213ENST00000630925 APOC1P02654 83 aa4.41□□□□□ -1.7
SDCBP-213ENST00000630925 OCM2P0CE71 109 aa4.41□□□□□ -1.7
SDCBP-213ENST00000630925 DPEP1P16444 411 aa4.41□□□□□ -1.7
SDCBP-213ENST00000630925 RPL21P46778 160 aaKnown RBP4.41□□□□□ -1.7
SDCBP-213ENST00000630925 GLRBP48167 497 aa4.41□□□□□ -1.7
SDCBP-213ENST00000630925 NPY2RP49146 381 aa4.41□□□□□ -1.7
SDCBP-213ENST00000630925 XKP51811 444 aa4.41□□□□□ -1.7
SDCBP-213ENST00000630925 RAG2P55895 527 aa4.41□□□□□ -1.7
SDCBP-213ENST00000630925 SNRPEP62304 92 aaKnown RBP4.41□□□□□ -1.7
SDCBP-213ENST00000630925 OGDHQ02218 1023 aa4.41□□□□□ -1.7
SDCBP-213ENST00000630925 EGR3Q06889 387 aa4.41□□□□□ -1.7
SDCBP-213ENST00000630925 IL10RBQ08334 325 aa4.41□□□□□ -1.7
SDCBP-213ENST00000630925 ILF3Q12906 894 aaKnown RBP eCLIP4.41□□□□□ -1.7
SDCBP-213ENST00000630925 FZD5Q13467 585 aa4.41□□□□□ -1.7
SDCBP-213ENST00000630925 C1orf61Q13536 156 aa4.41□□□□□ -1.7
SDCBP-213ENST00000630925 CDH18Q13634 790 aa4.41□□□□□ -1.7
SDCBP-213ENST00000630925 OR4D1Q15615 310 aa4.41□□□□□ -1.7
SDCBP-213ENST00000630925 ZNF658BQ4V348 819 aaPredicted RBP4.41□□□□□ -1.7
SDCBP-213ENST00000630925 EARS2Q5JPH6 523 aaKnown RBP4.41□□□□□ -1.7
SDCBP-213ENST00000630925 HIST2H2AA3Q6FI13 130 aa4.41□□□□□ -1.7
SDCBP-213ENST00000630925 LINGO4Q6UY18 593 aa4.41□□□□□ -1.7
SDCBP-213ENST00000630925 ZNF621Q6ZSS3 439 aa4.41□□□□□ -1.7
SDCBP-213ENST00000630925 FAM92BQ6ZTR7 304 aa4.41□□□□□ -1.7
SDCBP-213ENST00000630925 MON1BQ7L1V2 547 aa4.41□□□□□ -1.7
SDCBP-213ENST00000630925 CALHM1Q8IU99 346 aa4.41□□□□□ -1.7
SDCBP-213ENST00000630925 BBS7Q8IWZ6 715 aa4.41□□□□□ -1.7
SDCBP-213ENST00000630925 METTL4Q8N3J2 472 aa4.41□□□□□ -1.7
SDCBP-213ENST00000630925 FAM109AQ8N4B1 249 aa4.41□□□□□ -1.7
SDCBP-213ENST00000630925 TXNDC5Q8NBS9 432 aaKnown RBP4.41□□□□□ -1.7
SDCBP-213ENST00000630925 GJC3Q8NFK1 279 aa4.41□□□□□ -1.7
SDCBP-213ENST00000630925 OR4N2Q8NGD1 307 aa4.41□□□□□ -1.7
SDCBP-213ENST00000630925 OR1J2Q8NGS2 313 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms