RNA–Protein interactions for RNA: ENST00000630424.2

UBE3A-220, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS P3 TSL 5 BASIC

Gene UBE3A, Length 5,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-220ENST00000630424 GHRLQ9UBU3 117 aa13.19□□□□□ -0.3
UBE3A-220ENST00000630424 SLC22A7Q9Y694 548 aa13.19□□□□□ -0.3
UBE3A-220ENST00000630424 SHOXO15266 292 aa13.19□□□□□ -0.3
UBE3A-220ENST00000630424 HAVCR2Q8TDQ0 301 aa13.19□□□□□ -0.3
UBE3A-220ENST00000630424 ZC3HAV1LQ96H79 300 aaKnown RBP13.19□□□□□ -0.3
UBE3A-220ENST00000630424 LCORQ96JN0 433 aaPredicted RBP13.19□□□□□ -0.3
UBE3A-220ENST00000630424 PLEKHM1Q9Y4G2 1056 aa13.19□□□□□ -0.3
UBE3A-220ENST00000630424 MAB21L2Q9Y586 359 aa13.19□□□□□ -0.3
UBE3A-220ENST00000630424 KIF13AQ9H1H9 1805 aa13.19□□□□□ -0.3
UBE3A-220ENST00000630424 SUSD5O60279 629 aa13.19□□□□□ -0.3
UBE3A-220ENST00000630424 CD34P28906 385 aa13.19□□□□□ -0.3
UBE3A-220ENST00000630424 BMXP51813 675 aa13.19□□□□□ -0.3
UBE3A-220ENST00000630424 PCGF3Q3KNV8 242 aa13.19□□□□□ -0.3
UBE3A-220ENST00000630424 SLC6A19Q695T7 634 aa13.19□□□□□ -0.3
UBE3A-220ENST00000630424 ZNF585AQ6P3V2 769 aa13.19□□□□□ -0.3
UBE3A-220ENST00000630424 PODNL1Q6PEZ8 512 aa13.19□□□□□ -0.3
UBE3A-220ENST00000630424 FAM57BQ71RH2 274 aa13.19□□□□□ -0.3
UBE3A-220ENST00000630424 PGBD5Q8N414 524 aa13.19□□□□□ -0.3
UBE3A-220ENST00000630424 OR1S1Q8NH92 325 aa13.19□□□□□ -0.3
UBE3A-220ENST00000630424 PDLIM5Q96HC4 596 aaKnown RBP13.19□□□□□ -0.3
UBE3A-220ENST00000630424 C3orf30Q96M34 536 aa13.19□□□□□ -0.3
UBE3A-220ENST00000630424 CHD4Q14839 1912 aa13.19□□□□□ -0.3
UBE3A-220ENST00000630424 KRBA1A5PL33 1030 aa13.19□□□□□ -0.3
UBE3A-220ENST00000630424 ABHD16AO95870 558 aa13.19□□□□□ -0.3
UBE3A-220ENST00000630424 CARD18P57730 90 aa13.19□□□□□ -0.3
UBE3A-220ENST00000630424 GPLD1P80108 840 aa13.19□□□□□ -0.3
UBE3A-220ENST00000630424 C17orf67Q0P5P2 114 aa13.19□□□□□ -0.3
UBE3A-220ENST00000630424 NKAIN1Q4KMZ8 207 aa13.19□□□□□ -0.3
UBE3A-220ENST00000630424 C18orf63Q68DL7 685 aa13.19□□□□□ -0.3
UBE3A-220ENST00000630424 TRNP1Q6NT89 227 aa13.19□□□□□ -0.3
UBE3A-220ENST00000630424 WFDC5Q8TCV5 224 aa13.19□□□□□ -0.3
UBE3A-220ENST00000630424 FOLH1BQ9HBA9 442 aa13.19□□□□□ -0.3
UBE3A-220ENST00000630424 GCM1Q9NP62 436 aa13.19□□□□□ -0.3
UBE3A-220ENST00000630424 DCAF13Q9NV06 445 aaKnown RBP13.19□□□□□ -0.3
UBE3A-220ENST00000630424 TAS2R3Q9NYW6 316 aa13.19□□□□□ -0.3
UBE3A-220ENST00000630424 ADAM29Q9UKF5 820 aa13.19□□□□□ -0.3
UBE3A-220ENST00000630424 INTS6Q9UL03 887 aaKnown RBP13.19□□□□□ -0.3
UBE3A-220ENST00000630424 RGPD8O14715 1765 aaPredicted RBP13.19□□□□□ -0.3
UBE3A-220ENST00000630424 B4DXG7 233 aa13.18□□□□□ -0.3
UBE3A-220ENST00000630424 EDN3P14138 238 aa13.18□□□□□ -0.3
UBE3A-220ENST00000630424 EFNA3P52797 238 aa13.18□□□□□ -0.3
UBE3A-220ENST00000630424 NCS1P62166 190 aa13.18□□□□□ -0.3
UBE3A-220ENST00000630424 SPOCK1Q08629 439 aa13.18□□□□□ -0.3
UBE3A-220ENST00000630424 PRSS48Q7RTY5 328 aa13.18□□□□□ -0.3
UBE3A-220ENST00000630424 ZNF687Q8N1G0 1237 aa13.18□□□□□ -0.3
UBE3A-220ENST00000630424 LILRA3Q8N6C8 439 aaPredicted RBP13.18□□□□□ -0.3
UBE3A-220ENST00000630424 SUN5Q8TC36 379 aa13.18□□□□□ -0.3
UBE3A-220ENST00000630424 LKAAEAR1Q8TD35 194 aa13.18□□□□□ -0.3
UBE3A-220ENST00000630424 TMEM100Q9NV29 134 aa13.18□□□□□ -0.3
UBE3A-220ENST00000630424 KNDC1Q76NI1 1749 aa13.18□□□□□ -0.3
UBE3A-220ENST00000630424 OR7C1O76099 320 aaPredicted RBP13.18□□□□□ -0.3
UBE3A-220ENST00000630424 RAB3DO95716 219 aa13.18□□□□□ -0.3
UBE3A-220ENST00000630424 SERPINA2P20848 420 aa13.18□□□□□ -0.3
UBE3A-220ENST00000630424 GPX3P22352 226 aa13.18□□□□□ -0.3
UBE3A-220ENST00000630424 SEMA3BQ13214 749 aa13.18□□□□□ -0.3
UBE3A-220ENST00000630424 SGPP2Q8IWX5 399 aa13.18□□□□□ -0.3
UBE3A-220ENST00000630424 THOC3Q96J01 351 aaKnown RBP13.18□□□□□ -0.3
UBE3A-220ENST00000630424 SPIN2AQ99865 258 aa13.18□□□□□ -0.3
UBE3A-220ENST00000630424 SPIN2BQ9BPZ2 258 aa13.18□□□□□ -0.3
UBE3A-220ENST00000630424 EPHX3Q9H6B9 360 aa13.18□□□□□ -0.3
UBE3A-220ENST00000630424 AGPAT4Q9NRZ5 378 aa13.18□□□□□ -0.3
UBE3A-220ENST00000630424 ALOX12BO75342 701 aa13.18□□□□□ -0.3
UBE3A-220ENST00000630424 TPPPO94811 219 aa13.18□□□□□ -0.3
UBE3A-220ENST00000630424 SRFP11831 508 aa13.18□□□□□ -0.3
UBE3A-220ENST00000630424 CDK2P24941 298 aa13.18□□□□□ -0.3
UBE3A-220ENST00000630424 EIF2DP41214 584 aaKnown RBP13.18□□□□□ -0.3
UBE3A-220ENST00000630424 ADPRHP54922 357 aa13.18□□□□□ -0.3
UBE3A-220ENST00000630424 AADACL4Q5VUY2 407 aa13.18□□□□□ -0.3
UBE3A-220ENST00000630424 MED25Q71SY5 747 aa13.18□□□□□ -0.3
UBE3A-220ENST00000630424 PXKQ7Z7A4 578 aa13.18□□□□□ -0.3
UBE3A-220ENST00000630424 SIRT6Q8N6T7 355 aa13.18□□□□□ -0.3
UBE3A-220ENST00000630424 PSMF1Q92530 271 aa13.18□□□□□ -0.3
UBE3A-220ENST00000630424 NICN1Q9BSH3 213 aa13.18□□□□□ -0.3
UBE3A-220ENST00000630424 FUNDC2Q9BWH2 189 aa13.18□□□□□ -0.3
UBE3A-220ENST00000630424 ELOVL3Q9HB03 270 aa13.18□□□□□ -0.3
UBE3A-220ENST00000630424 IL37Q9NZH6 218 aa13.18□□□□□ -0.3
UBE3A-220ENST00000630424 SLC6A5Q9Y345 797 aa13.18□□□□□ -0.3
UBE3A-220ENST00000630424 PCDHGA1Q9Y5H4 931 aa13.18□□□□□ -0.3
UBE3A-220ENST00000630424 TCHHQ07283 1943 aa13.18□□□□□ -0.3
UBE3A-220ENST00000630424 A0A1B0GX78 115 aa13.18□□□□□ -0.3
UBE3A-220ENST00000630424 ARGFXA6NJG6 315 aa13.18□□□□□ -0.3
UBE3A-220ENST00000630424 FAM166BA8MTA8 275 aa13.18□□□□□ -0.3
UBE3A-220ENST00000630424 ARSBP15848 533 aa13.18□□□□□ -0.3
UBE3A-220ENST00000630424 MS4A2Q01362 244 aa13.18□□□□□ -0.3
UBE3A-220ENST00000630424 LTB4RQ15722 352 aa13.18□□□□□ -0.3
UBE3A-220ENST00000630424 PROX2Q3B8N5 592 aa13.18□□□□□ -0.3
UBE3A-220ENST00000630424 SERPINA12Q8IW75 414 aa13.18□□□□□ -0.3
UBE3A-220ENST00000630424 FAM83FQ8NEG4 500 aaPredicted RBP13.18□□□□□ -0.3
UBE3A-220ENST00000630424 CCDC74AQ96AQ1 378 aa13.18□□□□□ -0.3
UBE3A-220ENST00000630424 NRSN2Q9GZP1 204 aa13.18□□□□□ -0.3
UBE3A-220ENST00000630424 RANBP3Q9H6Z4 567 aaPredicted RBP13.18□□□□□ -0.3
UBE3A-220ENST00000630424 NLKQ9UBE8 527 aa13.18□□□□□ -0.3
UBE3A-220ENST00000630424 TESQ9UGI8 421 aaKnown RBP13.18□□□□□ -0.3
UBE3A-220ENST00000630424 IGHV3-20A0A0C4DH32 117 aa13.17□□□□□ -0.3
UBE3A-220ENST00000630424 TACR1P25103 407 aa13.17□□□□□ -0.3
UBE3A-220ENST00000630424 SLC35A1P78382 337 aa13.17□□□□□ -0.3
UBE3A-220ENST00000630424 P2RY14Q15391 338 aa13.17□□□□□ -0.3
UBE3A-220ENST00000630424 EXOSC6Q5RKV6 272 aaKnown RBP13.17□□□□□ -0.3
UBE3A-220ENST00000630424 C9orf50Q5SZB4 431 aa13.17□□□□□ -0.3
UBE3A-220ENST00000630424 C6orf89Q6UWU4 347 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms