RNA–Protein interactions for RNA: ENST00000629725.2

TARDBP-228, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 1,031 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-228ENST00000629725 MST1LQ2TV78 715 aa17.63■□□□□ 0.41
TARDBP-228ENST00000629725 ZNF540Q8NDQ6 660 aa17.63■□□□□ 0.41
TARDBP-228ENST00000629725 CLHC1Q8NHS4 586 aa17.63■□□□□ 0.41
TARDBP-228ENST00000629725 ADAMTS15Q8TE58 950 aa17.63■□□□□ 0.41
TARDBP-228ENST00000629725 CCDC126Q96EE4 140 aa17.63■□□□□ 0.41
TARDBP-228ENST00000629725 MYOZ1Q9NP98 299 aaPredicted RBP17.63■□□□□ 0.41
TARDBP-228ENST00000629725 BAIAP2L1Q9UHR4 511 aa17.63■□□□□ 0.41
TARDBP-228ENST00000629725 NUP214P35658 2090 aaPredicted RBP17.62■□□□□ 0.41
TARDBP-228ENST00000629725 EXOC1LA0A1B0GW35 172 aa17.62■□□□□ 0.41
TARDBP-228ENST00000629725 ZNF716A6NP11 495 aa17.62■□□□□ 0.41
TARDBP-228ENST00000629725 NPIPB9F8W1W9 429 aa17.62■□□□□ 0.41
TARDBP-228ENST00000629725 SLC28A1O00337 649 aa17.62■□□□□ 0.41
TARDBP-228ENST00000629725 GPR171O14626 319 aa17.62■□□□□ 0.41
TARDBP-228ENST00000629725 MRPL33O75394 65 aaKnown RBP17.62■□□□□ 0.41
TARDBP-228ENST00000629725 ITGA5P08648 1049 aa17.62■□□□□ 0.41
TARDBP-228ENST00000629725 NTF4P34130 210 aa17.62■□□□□ 0.41
TARDBP-228ENST00000629725 FOXG1P55316 489 aaPredicted RBP17.62■□□□□ 0.41
TARDBP-228ENST00000629725 NAA20P61599 178 aa17.62■□□□□ 0.41
TARDBP-228ENST00000629725 MLC1Q15049 377 aa17.62■□□□□ 0.41
TARDBP-228ENST00000629725 SYT14P1Q58G82 188 aa17.62■□□□□ 0.41
TARDBP-228ENST00000629725 FRMD7Q6ZUT3 714 aa17.62■□□□□ 0.41
TARDBP-228ENST00000629725 WDR31Q8NA23 367 aa17.62■□□□□ 0.41
TARDBP-228ENST00000629725 ST8SIA1Q92185 356 aa17.62■□□□□ 0.41
TARDBP-228ENST00000629725 SOX7Q9BT81 388 aa17.62■□□□□ 0.41
TARDBP-228ENST00000629725 THUMPD3Q9BV44 507 aaKnown RBP17.62■□□□□ 0.41
TARDBP-228ENST00000629725 ACTRT3Q9BYD9 372 aa17.62■□□□□ 0.41
TARDBP-228ENST00000629725 TNFRSF12AQ9NP84 129 aa17.62■□□□□ 0.41
TARDBP-228ENST00000629725 FAF1Q9UNN5 650 aaPredicted RBP17.62■□□□□ 0.41
TARDBP-228ENST00000629725 PTGDR2Q9Y5Y4 395 aa17.62■□□□□ 0.41
TARDBP-228ENST00000629725 ATP6V1G2-DDX39BF2Z307 99 aa17.61■□□□□ 0.41
TARDBP-228ENST00000629725 SNRPD2P62316 118 aaKnown RBP17.61■□□□□ 0.41
TARDBP-228ENST00000629725 MERTKQ12866 999 aa17.61■□□□□ 0.41
TARDBP-228ENST00000629725 OR52E4Q8NGH9 312 aa17.61■□□□□ 0.41
TARDBP-228ENST00000629725 SLC25A43Q8WUT9 341 aaPredicted RBP17.61■□□□□ 0.41
TARDBP-228ENST00000629725 MTERF3Q96E29 417 aa17.61■□□□□ 0.41
TARDBP-228ENST00000629725 ZHX1-C8orf76Q96EF9 292 aa17.61■□□□□ 0.41
TARDBP-228ENST00000629725 FCRL1Q96LA6 429 aa17.61■□□□□ 0.41
TARDBP-228ENST00000629725 FMO2Q99518 471 aa17.61■□□□□ 0.41
TARDBP-228ENST00000629725 VRK1Q99986 396 aaPredicted RBP17.61■□□□□ 0.41
TARDBP-228ENST00000629725 BPESC1Q9GZL8 116 aa17.61■□□□□ 0.41
TARDBP-228ENST00000629725 ADAM19Q9H013 955 aa17.61■□□□□ 0.41
TARDBP-228ENST00000629725 AMDHD2Q9Y303 409 aa17.61■□□□□ 0.41
TARDBP-228ENST00000629725 KCNE3Q9Y6H6 103 aa17.61■□□□□ 0.41
TARDBP-228ENST00000629725 CYP7B1O75881 506 aa17.6■□□□□ 0.41
TARDBP-228ENST00000629725 MYL2P10916 166 aa17.6■□□□□ 0.41
TARDBP-228ENST00000629725 GCAP28676 217 aa17.6■□□□□ 0.41
TARDBP-228ENST00000629725 SRP14P37108 136 aaKnown RBP17.6■□□□□ 0.41
TARDBP-228ENST00000629725 CCT3P49368 545 aaKnown RBP17.6■□□□□ 0.41
TARDBP-228ENST00000629725 SESN3P58005 492 aa17.6■□□□□ 0.41
TARDBP-228ENST00000629725 TP53BP2Q13625 1128 aa17.6■□□□□ 0.41
TARDBP-228ENST00000629725 RFTN2Q52LD8 501 aaPredicted RBP17.6■□□□□ 0.41
TARDBP-228ENST00000629725 CFAP157Q5JU67 520 aa17.6■□□□□ 0.41
TARDBP-228ENST00000629725 PDZK1Q5T2W1 519 aa17.6■□□□□ 0.41
TARDBP-228ENST00000629725 C9orf135Q5VTT2 229 aa17.6■□□□□ 0.41
TARDBP-228ENST00000629725 CLEC6AQ6EIG7 209 aa17.6■□□□□ 0.41
TARDBP-228ENST00000629725 R3HCC1LQ7Z5L2 792 aaKnown RBP17.6■□□□□ 0.41
TARDBP-228ENST00000629725 C17orf78Q8N4C9 275 aa17.6■□□□□ 0.41
TARDBP-228ENST00000629725 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP17.6■□□□□ 0.41
TARDBP-228ENST00000629725 PIGXQ8TBF5 258 aa17.6■□□□□ 0.41
TARDBP-228ENST00000629725 TMEM234Q8WY98 164 aa17.6■□□□□ 0.41
TARDBP-228ENST00000629725 LAT2Q9GZY6 243 aa17.6■□□□□ 0.41
TARDBP-228ENST00000629725 SLC17A5Q9NRA2 495 aa17.6■□□□□ 0.41
TARDBP-228ENST00000629725 MOKQ9UQ07 419 aa17.6■□□□□ 0.41
TARDBP-228ENST00000629725 G3V2L1 256 aa17.59■□□□□ 0.41
TARDBP-228ENST00000629725 PDLIM1O00151 329 aa17.59■□□□□ 0.41
TARDBP-228ENST00000629725 DNAJA2O60884 412 aa17.59■□□□□ 0.41
TARDBP-228ENST00000629725 KRT16P08779 473 aa17.59■□□□□ 0.41
TARDBP-228ENST00000629725 TFPIP10646 304 aa17.59■□□□□ 0.41
TARDBP-228ENST00000629725 DDX5P17844 614 aaKnown RBP17.59■□□□□ 0.41
TARDBP-228ENST00000629725 ASMTP46597 345 aa17.59■□□□□ 0.41
TARDBP-228ENST00000629725 RPL38P63173 70 aaKnown RBP17.59■□□□□ 0.41
TARDBP-228ENST00000629725 SLC25A3Q00325 362 aa17.59■□□□□ 0.41
TARDBP-228ENST00000629725 SKP2Q13309 424 aa17.59■□□□□ 0.41
TARDBP-228ENST00000629725 SLC46A3Q7Z3Q1 461 aa17.59■□□□□ 0.41
TARDBP-228ENST00000629725 ANKS4BQ8N8V4 417 aa17.59■□□□□ 0.41
TARDBP-228ENST00000629725 C1orf162Q8NEQ5 155 aaPredicted RBP17.59■□□□□ 0.41
TARDBP-228ENST00000629725 OR56A1Q8NGH5 318 aa17.59■□□□□ 0.41
TARDBP-228ENST00000629725 OR2T11Q8NH01 316 aa17.59■□□□□ 0.41
TARDBP-228ENST00000629725 ACMSDQ8TDX5 336 aa17.59■□□□□ 0.41
TARDBP-228ENST00000629725 GPATCH2Q9NW75 528 aa17.59■□□□□ 0.41
TARDBP-228ENST00000629725 UPB1Q9UBR1 384 aa17.59■□□□□ 0.41
TARDBP-228ENST00000629725 TMEFF2Q9UIK5 374 aaPredicted RBP17.59■□□□□ 0.41
TARDBP-228ENST00000629725 DCTN4Q9UJW0 460 aa17.59■□□□□ 0.41
TARDBP-228ENST00000629725 TMED5Q9Y3A6 229 aa17.59■□□□□ 0.41
TARDBP-228ENST00000629725 LRP5LA4QPB2 252 aa17.58■□□□□ 0.4
TARDBP-228ENST00000629725 SERINC4A6NH21 518 aa17.58■□□□□ 0.4
TARDBP-228ENST00000629725 PMS2P2O95744 297 aa17.58■□□□□ 0.4
TARDBP-228ENST00000629725 SLC16A1P53985 500 aa17.58■□□□□ 0.4
TARDBP-228ENST00000629725 TGFBR3Q03167 851 aa17.58■□□□□ 0.4
TARDBP-228ENST00000629725 CASP12Q6UXS9 341 aa17.58■□□□□ 0.4
TARDBP-228ENST00000629725 ZYG11AQ6WRX3 759 aa17.58■□□□□ 0.4
TARDBP-228ENST00000629725 CCDC103Q8IW40 242 aa17.58■□□□□ 0.4
TARDBP-228ENST00000629725 IFT81Q8WYA0 676 aa17.58■□□□□ 0.4
TARDBP-228ENST00000629725 DNAJA3Q96EY1 480 aa17.58■□□□□ 0.4
TARDBP-228ENST00000629725 BHLHE41Q9C0J9 482 aaPredicted RBP17.58■□□□□ 0.4
TARDBP-228ENST00000629725 NMUR2Q9GZQ4 415 aa17.58■□□□□ 0.4
TARDBP-228ENST00000629725 ACER3Q9NUN7 267 aa17.58■□□□□ 0.4
TARDBP-228ENST00000629725 DCDC2Q9UHG0 476 aa17.58■□□□□ 0.4
TARDBP-228ENST00000629725 SPIN1Q9Y657 262 aaPredicted RBP17.58■□□□□ 0.4
TARDBP-228ENST00000629725 WNT11O96014 354 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms